Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq696 571 7e-158
seq2 571 7e-158
seq74 174 2e-38
seq4 95.1 2e-14
>seq696
Length=154923
Score = 571 bits (632), Expect = 7e-158
Identities = 738/1017 (73%), Gaps = 8/1017 (1%)
Strand=Plus/Minus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||||||| || | ||| | ||||| ||||| |||| || ||||||||| || |||||
Sbjct 33730 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 33671
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| |||| ||| ||||| | |||||| || || || || || || || ||||| |||
Sbjct 33670 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 33611
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || ||||||||||| ||||| | ||| || ||||| || |||||||| ||||| |||
Sbjct 33610 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 33551
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| | ||| ||||| | | || | | ||| |||| | ||| | || || |||||
Sbjct 33550 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 33491
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
| |||||||||||| ||||| | ||||| ||| |||| ||||||||||| |||||
Sbjct 33490 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 33431
Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069
|| ||||| || || |||||||||||||| ||||| |||| || | | || || |
Sbjct 33430 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 33371
Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129
|| || ||||| ||||||||||||| | | ||| || || ||||| |||| || ||
Sbjct 33370 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 33311
Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189
|| | ||||| || | ||||| | ||| || || ||||||||||| |||||||| |
Sbjct 33310 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 33251
Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249
||||| ||||| || || || | ||||| | ||||| |||||| || || ||||||||
Sbjct 33250 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 33191
Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309
|||||||||||||||| || || || || ||||| || || || ||| ||||||
Sbjct 33190 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 33131
Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369
||||| || || |||||||| || || ||||| || || || | | || | | |||
Sbjct 33130 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAACAGATCGAGCA 33071
Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429
| || |||||||| | ||| ||||| || | || || || ||||||||||| ||||||
Sbjct 33070 AGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAAA 33011
Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489
||||| || || || | ||| ||| | ||||||||||| ||||||||||||||
Sbjct 33010 GCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAC 32951
Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549
|||| | | |||||| | | | | |||||| || || || ||||| || | |||
Sbjct 32950 AGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAAA 32891
Query 102550 TTAGCACCTTCAAGGTAACTAG--AC--GCAAGCCCGTGGGTATACCAGGAAGTAGCAAA 102605
|| |||||| ||| ||| || || | || || |||||||| ||||| ||||
Sbjct 32890 TTGCAACCTTC----TAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAA 32835
Query 102606 CGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCC 102665
|| || || || | ||| ||||| | |||| ||| ||| ||||| || | ||| ||
Sbjct 32834 GGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACC 32775
Query 102666 AGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722
||||||||| ||||| || ||||| || | | ||||||||||| || |||||
Sbjct 32774 AGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 32718
Score = 531 bits (588), Expect = 6e-146
Identities = 698/972 (72%), Gaps = 6/972 (1%)
Strand=Plus/Plus
Query 103162 AGACTCTGCAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTC 103221
|| ||| ||||||| ||||| || |||||||||||||| ||||| || ||||| |||||
Sbjct 375 AGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTC 434
Query 103222 CATACCCAGACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACC 103281
|||||| || ||| ||||| | || || ||||| || || | ||||| || ||||
Sbjct 435 CATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACT 494
Query 103282 ATCAAGGATGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACC 103341
||||| | || |||||||| ||||| || || |||||||| ||||| || |||| |||
Sbjct 495 ATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACC 554
Query 103342 AAGTGCGGTGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG 103401
| || || ||||| ||||| ||||| || |
Sbjct 555 TAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACG 614
Query 103402 GGAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTAC 103461
|| |||||||| || |||||||||||||| || || || ||||| ||||| |||||
Sbjct 615 AGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTAC 674
Query 103462 GATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTC 103521
|||||||| || ||||| ||||| ||||| ||||||| | || ||||||| ||||
Sbjct 675 AATGTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTC 734
Query 103522 AGTCGTCTCAC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTG 103580
|| || || | || | | | || | || |||| ||||| ||||||||||| || || |
Sbjct 735 TGTGGTTTCCCTGATCAAACTAGAAGTTACCAAG-GAACCATGCATAGCACTAAAAAGGG 793
Query 103581 AACCACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTT 103640
| || ||||| || ||||| || || | |||||| || |||||||| |||||||| || |
Sbjct 794 AGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCT 853
Query 103641 CGGCTTGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGG 103700
| || ||||| || | ||| ||||||| || || || || || | ||||||| |||| |
Sbjct 854 CAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAG 913
Query 103701 AGAACGAACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAG 103760
| || || ||||||| || |||| |||||| || || | |||||| ||||||||||
Sbjct 914 AAAAACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAG 973
Query 103761 CAGAGTATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCAC 103820
| || ||||| || ||||| || ||||| ||||||||| | | |||||||||||
Sbjct 974 CTGAATATGCAACCGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCAC 1033
Query 103821 GTCCCATATATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCAC 103880
| |||||||| | | |||| | ||||| | || | |||| |||||||||
Sbjct 1034 GACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCAC 1093
Query 103881 CGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAA 103940
|||| || ||||| ||||||| ||||| |||||||| || || || || || | |||||
Sbjct 1094 CGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAA 1153
Query 103941 TTGCGTTGGAGGAG--GGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGA 103998
| || || || || |||| || ||||| || || || ||||| ||||| | || ||
Sbjct 1154 TAGC--TGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTAAAGAAGAGA 1211
Query 103999 ACCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAAC 104058
|||| || ||||||||||| || || ||||| || ||||| || || | ||| || |
Sbjct 1212 TCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGAT 1271
Query 104059 GATGAAGCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAAC 104118
|| || | ||||| | ||| | || |||||||||| ||||| ||||| ||||
Sbjct 1272 AATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAAT 1331
Query 104119 ATAGAGACGGTT 104130
|| ||||||||
Sbjct 1332 GTAAAGACGGTT 1343
>seq2
Length=19320864
Score = 571 bits (632), Expect = 7e-158
Identities = 738/1017 (73%), Gaps = 8/1017 (1%)
Strand=Plus/Plus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||||||| || | ||| | ||||| ||||| |||| || ||||||||| || |||||
Sbjct 8802672 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 8802731
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| |||| ||| ||||| | |||||| || || || || || || || ||||| |||
Sbjct 8802732 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 8802791
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || ||||||||||| ||||| | ||| || ||||| || |||||||| ||||| |||
Sbjct 8802792 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 8802851
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| | ||| ||||| | | || | | ||| |||| | ||| | || || |||||
Sbjct 8802852 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 8802911
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
| |||||||||||| ||||| | ||||| ||| |||| ||||||||||| |||||
Sbjct 8802912 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 8802971
Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069
|| ||||| || || |||||||||||||| ||||| |||| || | | || || |
Sbjct 8802972 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 8803031
Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129
|| || ||||| ||||||||||||| | | ||| || || ||||| |||| || ||
Sbjct 8803032 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 8803091
Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189
|| | ||||| || | ||||| | ||| || || ||||||||||| |||||||| |
Sbjct 8803092 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 8803151
Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249
||||| ||||| || || || | ||||| | ||||| |||||| || || ||||||||
Sbjct 8803152 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 8803211
Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309
|||||||||||||||| || || || || ||||| || || || ||| ||||||
Sbjct 8803212 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 8803271
Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369
||||| || || |||||||| || || ||||| || || || | | || | | |||
Sbjct 8803272 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAACAGATCGAGCA 8803331
Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429
| || |||||||| | ||| ||||| || | || || || ||||||||||| ||||||
Sbjct 8803332 AGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAAA 8803391
Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489
||||| || || || | ||| ||| | ||||||||||| ||||||||||||||
Sbjct 8803392 GCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAC 8803451
Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549
|||| | | |||||| | | | | |||||| || || || ||||| || | |||
Sbjct 8803452 AGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAAA 8803511
Query 102550 TTAGCACCTTCAAGGTAACTAG--AC--GCAAGCCCGTGGGTATACCAGGAAGTAGCAAA 102605
|| |||||| ||| ||| || || | || || |||||||| ||||| ||||
Sbjct 8803512 TTGCAACCTTC----TAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAA 8803567
Query 102606 CGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCC 102665
|| || || || | ||| ||||| | |||| ||| ||| ||||| || | ||| ||
Sbjct 8803568 GGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACC 8803627
Query 102666 AGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722
||||||||| ||||| || ||||| || | | ||||||||||| || |||||
Sbjct 8803628 AGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 8803684
Score = 565 bits (626), Expect = 3e-156
Identities = 737/1017 (72%), Gaps = 8/1017 (1%)
Strand=Plus/Minus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||||||| || | ||| | ||||| ||||| |||| || ||||||||| || |||||
Sbjct 9135807 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 9135748
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| |||| ||| ||||| | |||||| || || || || || || || ||||| |||
Sbjct 9135747 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 9135688
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || ||||||||||| ||||| | ||| || ||||| || |||||||| ||||| |||
Sbjct 9135687 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 9135628
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| | ||| ||||| | | || | | ||| |||| | ||| | || || |||||
Sbjct 9135627 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 9135568
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
| |||||||||||| ||||| | ||||| ||| |||| ||||||||||| |||||
Sbjct 9135567 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 9135508
Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069
|| | ||| || || |||||||||||||| ||||| |||| || | | || || |
Sbjct 9135507 AAGCTGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 9135448
Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129
|| || ||||| ||||||||||||| | | ||| || || ||||| |||| || ||
Sbjct 9135447 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 9135388
Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189
|| | ||||| || | ||||| | ||| || || ||||||||||| |||||||| |
Sbjct 9135387 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 9135328
Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249
||||| ||||| || || || | ||||| | ||||| |||||| || || ||||||||
Sbjct 9135327 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 9135268
Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309
|||||||||||||||| || || || || ||||| || || || ||| ||||||
Sbjct 9135267 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 9135208
Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369
||||| || || |||||||| || || ||||| || || || | | || | | |||
Sbjct 9135207 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAACAGATCGAGCA 9135148
Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429
| || |||||||| | ||| ||||| || | || || || ||||||||||| ||||||
Sbjct 9135147 AGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAAA 9135088
Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489
||||| || || || | ||| ||| | ||||||||||| ||||||||||||||
Sbjct 9135087 GCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAC 9135028
Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549
|||| | | |||||| | | | | |||||| || || || ||||| || | |||
Sbjct 9135027 AGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAAA 9134968
Query 102550 TTAGCACCTTCAAGGTAACTAG--AC--GCAAGCCCGTGGGTATACCAGGAAGTAGCAAA 102605
|| |||||| ||| ||| || || | || || |||||||| ||||| ||||
Sbjct 9134967 TTGCAACCTTC----TAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAA 9134912
Query 102606 CGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCC 102665
|| || || || | ||| ||||| | |||| ||| ||| ||||| || | ||| ||
Sbjct 9134911 GGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACC 9134852
Query 102666 AGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722
||||||||| ||||| || ||||| || | | ||||||||||| || |||||
Sbjct 9134851 AGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 9134795
Score = 535 bits (592), Expect = 5e-147
Identities = 728/1017 (72%), Gaps = 28/1017 (3%)
Strand=Plus/Minus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||||||| || | ||| | ||||| ||||| |||| || ||||||||| || |||||
Sbjct 12219215 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 12219156
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| | || ||| ||||| | |||||| || || || || || || || ||||| |||
Sbjct 12219155 TGAGCCGTCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 12219096
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || ||||||||||| ||||| | ||| || | ||| ||||||||||| ||||| |||
Sbjct 12219095 TCAAATTCTGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCACGTAGG 12219036
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| | ||| ||||| | | || | | ||| |||| | ||| | || || |||||
Sbjct 12219035 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 12218976
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
| |||||||||||| ||||| | ||||| ||| |||| ||||||||||| |||||
Sbjct 12218975 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 12218916
Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069
|| ||||| || || |||||||||||||| ||||| |||| || | | || || |
Sbjct 12218915 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 12218856
Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129
|| || ||||| ||||||||||||| | | ||| || || ||||| || | || ||
Sbjct 12218855 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCAACATGAATA 12218796
Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189
|| | ||||| || | || || | ||| || || ||||||||||| |||||||| |
Sbjct 12218795 GCGCATAGCAGAGCCGCGCCAAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 12218736
Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249
||||| ||||| || || || | ||||| | ||||| |||||| || || ||||||||
Sbjct 12218735 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 12218676
Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309
|||||||||||||||| || || || || ||||| || || || ||| ||||||
Sbjct 12218675 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 12218616
Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369
||||| || || |||||||| || || ||||| || || || | | || | | |||
Sbjct 12218615 ACAGCAATGGGACCAGAGAATGCGATTGCATTATATGGTCGCAATTGAACAGATCGAGCA 12218556
Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429
| || |||||||| | ||| ||||| || | || || || ||||||||||| ||||||
Sbjct 12218555 AGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAAA 12218496
Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489
||||| || || || | ||| ||| | ||||||||||| ||||||||||||||
Sbjct 12218495 GCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAC 12218436
Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549
||||| |||| |||||| || || || ||||| || | |||
Sbjct 12218435 AGTAG-------------------GAGT-AGCAGGAGTAGAAACTGCAGCGGTTAAAAAA 12218396
Query 102550 TTAGCACCTTCAAGGTAACTAG--AC--GCAAGCCCGTGGGTATACCAGGAAGTAGCAAA 102605
|| |||||| ||| ||| || || | || || |||||||| ||||| ||||
Sbjct 12218395 TTGCAACCTTC----TAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAA 12218340
Query 102606 CGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCC 102665
|| || || || | ||| ||||| | |||| ||| ||| ||||| || | ||| ||
Sbjct 12218339 GGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACC 12218280
Query 102666 AGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722
||||||||| ||||| || ||||| || | | ||||||||||| || |||||
Sbjct 12218279 AGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 12218223
Score = 102 bits (112), Expect = 1e-16
Identities = 158/221 (71%), Gaps = 10/221 (5%)
Strand=Plus/Minus
Query 103915 CCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAGGAG--GGAACAACTGCACCAGAG 103972
||| || || || || || | |||||| || || || || |||| || ||||| ||
Sbjct 8835271 CCAGATCGGGTAAAAATGCAAACCAATAGC--TGCAGAAGTAGGAATAATGGCACCGGAA 8835214
Query 103973 ATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCG 104032
|| || ||||| ||||| | || || |||| || ||||||||||| || || |||||
Sbjct 8835213 ATAATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCT 8835154
Query 104033 ACGGGAGGTGCTGCTACGAAAGC---AACGATGAAGCAGATGGTTGCCGCCAACAGAGTT 104089
|| ||||| || || | ||| || ||| | || | || ||||| | ||| | ||
Sbjct 8835153 ACTGGAGGAGCAGCAATGAATGCGATAACAA--AAACGGA-AGTTGCGGTCAATAAGGTA 8835097
Query 104090 GGGATCATCAGCACACCGAACCAACCAACATAGAGACGGTT 104130
|||||||||| ||||| ||||| |||| || ||||||||
Sbjct 8835096 GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 8835056
Score = 82.4 bits (90), Expect = 1e-10
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 102812 ACATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCA 102871
||||| ||||| || || || | || || |||||||| ||| | | || || |||
Sbjct 2824391 ACATCAGAAGTAGGATAAGCAGCACAAGTGAGAACAAACCCTTGACCAATCTGCTCATCA 2824450
Query 102872 TCCAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTA 102931
|| || || || || ||||| |||| || || ||| ||||||||||| |
Sbjct 2824451 TCAAGGAAACTCTGGTCAGACTGATCAACAGATCCAGACACAACTTTACCAGCACAGCTT 2824510
Query 102932 GAACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCT 102991
||||| | ||||||||| || || || |||| ||| | || ||||| || || |||||
Sbjct 2824511 GAACAAGAACCAGCACGGCAAGAGTATGGCAAATCGATTCCAGCTTCCTCGGCCGCGTCA 2824570
Query 102992 AGAATATATTGATCATCCTCACAGGTGATATCATGATCACCTTCGGATGT 103041
|||| || || || ||||| | || || |||||||| | |||
Sbjct 2824571 AGAACGTAAACGTCGTCGTCACACTCAACCTCTTGCTCACCTTCTGGTGT 2824620
>seq74
Length=21493
Score = 174 bits (192), Expect = 2e-38
Identities = 248/360 (69%), Gaps = 9/360 (3%)
Strand=Plus/Plus
Query 103162 AGACTCTGCAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTC 103221
|| ||| ||||||| ||||| || |||||||||||||| ||||| || ||||| |||||
Sbjct 10674 AGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTC 10733
Query 103222 CATACCCAGACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACC 103281
|||||| | || ||||| | || || ||||| || || | ||||| || ||||
Sbjct 10734 CATACCAAAGTTAGTACGGTTAATAATATCAGCCCAAGTATTAATAACACGCCCTTGACT 10793
Query 103282 ATCAAGGATGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACC 103341
||||| | || |||||||| ||||| || || |||||||| ||||| ||||||| |||
Sbjct 10794 ATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACC 10853
Query 103342 AAGTGCGGTGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG 103401
| || || ||||| ||||| ||||| || |
Sbjct 10854 TAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACG 10913
Query 103402 GGAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTAC 103461
|| ||||||| | |||||||||| || || || ||||||||||| |||||
Sbjct 10914 AGAATTGTTGA---------AACGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTAC 10964
Query 103462 GATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTC 103521
|||||||| || | ||| ||||| ||||| ||||||| | || ||||||| ||||
Sbjct 10965 AATGTTGTAAGTTTATTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTC 11024
>seq4
Length=23328337
Score = 95.1 bits (104), Expect = 2e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 102824 GGGTATGCCACGCAGGTCAGAACAAAACC-TGCTTCTAGTTGATCGTCATCCAGAAAGGA 102882
||||| ||||| || |||| ||| |||| | || | ||| | | || || ||||| ||
Sbjct 11645018 GGGTAAGCCACACAAGTCAACACATAACCCTTCTCCAAGTGGCTA-TCCTCGAGAAACGA 11645076
Query 102883 TTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGAACACGCACC 102942
||| || || || | ||||| |||||| |||||| ||||| |||||||||||
Sbjct 11645077 ACCATCCGACTGGTCAACGTTGCCCGACACAATCTGACCAGCGCAAGTGGAACACGCACC 11645136
Query 102943 AGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAGAATATATTG 103002
|| | || || ||||||| ||||| ||||| || ||||| || || | || |||||
Sbjct 11645137 GGCTCTGCAAGAGTAAGGCAAGTCAACTCCTGCCTCTTCAGCTGCATCCAAGATGTATTG 11645196
Query 103003 ATCATC 103008
|||||
Sbjct 11645197 GTCATC 11645202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633508088431680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |