Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq696 535 5e-147 seq2 390 1e-103 seq74 208 9e-49 seq7 131 2e-25 seq4 109 6e-19 >seq696 Length=154923 Score = 535 bits (592), Expect = 5e-147 Identities = 720/1000 (72%), Gaps = 2/1000 (0%) Strand=Plus/Plus Query 124033 TGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAAC 124092 || || |||| ||| ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct 372 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 431 Query 124093 TTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTT 124152 ||||||||| | ||| || | ||| | || |||| |||| || | | ||| | Sbjct 432 TTCCATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTG 491 Query 124153 AGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212 | |||||| ||||||||||| || ||||||||||| | |||||| ||||| || | || Sbjct 492 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAAT 551 Query 124213 ACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACT 124272 ||| | || || ||||| | || ||| || || || | |||| |||||| || | | Sbjct 552 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 611 Query 124273 TCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGC 124332 | || |||||||| |||||| |||||||| | || ||||| |||||||| || || Sbjct 612 ACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGC 671 Query 124333 TACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTG 124392 ||| |||||||| |||||||||||||| ||||| | ||||| | || || || | Sbjct 672 TACAATGTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATT 731 Query 124393 CTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAA 124452 ||||| ||||| ||||| | | ||| || || | ||||||||||| || || | Sbjct 732 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAG 791 Query 124453 AGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATG 124512 || || ||||| | || ||||| ||| |||||| || || ||||| |||||||| || Sbjct 792 GGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTG 851 Query 124513 CTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATC 124572 ||| || ||||| || | |||||||||||||||||| ||||| || || ||||||||||| Sbjct 852 CTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 911 Query 124573 AGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGG 124632 ||| || |||||||||| ||| || | ||||| ||||| ||||| | || || Sbjct 912 AGAAAAACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGG 971 Query 124633 TGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTG 124692 |||||||| ||||| |||||||||||||| || | | | | |||||||||| Sbjct 972 AGCTGAATATGCAACCGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTC 1031 Query 124693 TCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACC 124752 | ||||| || | | ||||| | ||||| | || | | | ||||||||| Sbjct 1032 ACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACC 1091 Query 124753 ACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCC 124812 ||| || || | |||||||||||| | ||| ||||||||||| ||||| || || | || Sbjct 1092 ACCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACC 1151 Query 124813 GATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAA-AG 124871 ||||| || | |||| || ||||| || || || ||||| || || ||||| || Sbjct 1152 AATAGCTGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTA-AAGAAGAG 1210 Query 124872 AACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAA 124931 | || | || ||||| | || || || ||||| || ||||| || ||||| ||||| | Sbjct 1211 ATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGA 1270 Query 124932 CGATGAAACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAA 124991 || ||| | | ||| || | |||| || ||||| | |||||||||||| |||| Sbjct 1271 TAATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAA 1330 Query 124992 CATAAATTCTGTTGTTTGTTGATGTTACCCACTCACAGAA 125031 |||| | ||| | || |||| ||| | |||||| Sbjct 1331 TGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1370 Score = 385 bits (426), Expect = 6e-102 Identities = 708/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 33734 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 33675 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 33674 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 33615 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || ||||| ||||| ||||| | || || || || || ||||| || || | Sbjct 33614 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 33555 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| | |||||||| || | || | || |||| | ||| | || || || Sbjct 33554 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 33495 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || ||||| Sbjct 33494 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 33435 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 33434 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 33375 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| || ||||| | || || Sbjct 33374 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 33336 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| | || | || |||| || || || Sbjct 33335 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 33276 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 33275 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 33216 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| ||||||||||| Sbjct 33215 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 33156 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || |||| | || || || || | |||||||||||| ||| || || Sbjct 33155 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 33096 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | |||||||| | | ||| |||||||| | | | Sbjct 33095 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 33036 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| ||||||||| || | ||| |||||||| || Sbjct 33035 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 32976 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 32975 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 32916 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||| || || || || | ||| ||| || | ||||| Sbjct 32915 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 32856 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 32855 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 32796 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||||||||| |||| || || || || || ||| |||||| Sbjct 32795 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 32736 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 32735 GTCATCCATAATATCAAA 32718 >seq2 Length=19320864 Score = 390 bits (432), Expect = 1e-103 Identities = 709/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 9135811 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 9135752 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 9135751 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 9135692 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || ||||| ||||| ||||| | || || || || || ||||| || || | Sbjct 9135691 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 9135632 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| | |||||||| || | || | || |||| | ||| | || || || Sbjct 9135631 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 9135572 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || ||||| Sbjct 9135571 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 9135512 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || ||||| || || | ||| |||||||||||| | || || || | || || Sbjct 9135511 CCAAAAGCTGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 9135452 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| || ||||| | || || Sbjct 9135451 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 9135413 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| | || | || |||| || || || Sbjct 9135412 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 9135353 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 9135352 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 9135293 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| ||||||||||| Sbjct 9135292 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 9135233 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || |||| | || || || || | |||||||||||| ||| || || Sbjct 9135232 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 9135173 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | |||||||| | | ||| |||||||| | | | Sbjct 9135172 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 9135113 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| ||||||||| || | ||| |||||||| || Sbjct 9135112 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 9135053 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 9135052 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 9134993 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||| || || || || | ||| ||| || | ||||| Sbjct 9134992 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 9134933 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 9134932 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 9134873 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||||||||| |||| || || || || || ||| |||||| Sbjct 9134872 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 9134813 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 9134812 GTCATCCATAATATCAAA 9134795 Score = 385 bits (426), Expect = 6e-102 Identities = 708/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 8802668 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 8802727 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 8802728 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 8802787 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || ||||| ||||| ||||| | || || || || || ||||| || || | Sbjct 8802788 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 8802847 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| | |||||||| || | || | || |||| | ||| | || || || Sbjct 8802848 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 8802907 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || ||||| Sbjct 8802908 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 8802967 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 8802968 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 8803027 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| || ||||| | || || Sbjct 8803028 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 8803066 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| | || | || |||| || || || Sbjct 8803067 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 8803126 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 8803127 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 8803186 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| ||||||||||| Sbjct 8803187 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 8803246 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || |||| | || || || || | |||||||||||| ||| || || Sbjct 8803247 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 8803306 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | |||||||| | | ||| |||||||| | | | Sbjct 8803307 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 8803366 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| ||||||||| || | ||| |||||||| || Sbjct 8803367 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 8803426 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 8803427 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 8803486 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||| || || || || | ||| ||| || | ||||| Sbjct 8803487 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 8803546 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 8803547 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 8803606 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||||||||| |||| || || || || || ||| |||||| Sbjct 8803607 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 8803666 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 8803667 GTCATCCATAATATCAAA 8803684 Score = 354 bits (392), Expect = 9e-93 Identities = 700/1038 (67%), Gaps = 41/1038 (4%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 12219219 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 12219160 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 12219159 ATCTTGAGCCGTCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 12219100 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || ||||| ||||| ||||| | || || | || |||||||| || || | Sbjct 12219099 AGTCTCAAATTCTGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCACG 12219040 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| | |||||||| || | || | || |||| | ||| | || || || Sbjct 12219039 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 12218980 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || ||||| Sbjct 12218979 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 12218920 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 12218919 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 12218860 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| ||| ||| | |||||| | || || Sbjct 12218859 ACGGAA---TGTA-TTTG-----CACCATCACCA------------TCTTCAAATAAAGT 12218821 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||| ||||||| || ||||| | || | || |||| || || || Sbjct 12218820 ATTTTCTACAGTAGCAACATGAATAGCGCATAGCAGAGCCGCGCCAAGTACACCGGCGAC 12218761 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 12218760 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 12218701 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| ||||||||||| Sbjct 12218700 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 12218641 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || |||| | || || || || | |||||||||||| ||| || || Sbjct 12218640 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 12218581 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 |||| | ||| || || | |||||||| | | ||| |||||||| | | | Sbjct 12218580 TGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 12218521 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| ||||||||| || | ||| |||||||| || Sbjct 12218520 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 12218461 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || || || || | |||| Sbjct 12218460 ATCTCCTTGTGCTTCAGGACCCCACAG-----------TAGGA--------GT-AGCAGG 12218421 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||| || || || || | ||| ||| || | ||||| Sbjct 12218420 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 12218361 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 12218360 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 12218301 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||||||||| |||| || || || || || ||| |||||| Sbjct 12218300 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 12218241 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 12218240 GTCATCCATAATATCAAA 12218223 Score = 86.0 bits (94), Expect = 7e-12 Identities = 167/244 (68%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 124789 CCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGAT 124848 |||||| ||||| || || | || ||||| || | |||| || ||||| || || Sbjct 8835271 CCAGATCGGGTAAAAATGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCGGAAAT 8835212 Query 124849 GATGTTGTTACCATATAAGAA-AGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGA 124907 || ||||| || || ||||| ||| || | || ||||| | || || || ||||| | Sbjct 8835211 AATATTGTTTCCGTA-AAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTA 8835153 Query 124908 CAGGAGGTGCTGCAATAAATGCAACGATGAAACATGCTGCTGCTGTGAGTAAGCATGGAA 124967 | ||||| || ||||| ||||| | | ||| | | ||| || | |||| || | Sbjct 8835152 CTGGAGGAGCAGCAATGAATGCGATAACAAAAACGGAAGTTGCGGTCAATAAGGTAGGGA 8835093 Query 124968 TCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTTGTTGATGTTACCCACTCAC 125027 |||| | |||||||||||| |||| |||| | ||| | || |||| ||| | || Sbjct 8835092 TCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTAC 8835033 Query 125028 AGAA 125031 |||| Sbjct 8835032 AGAA 8835029 >seq74 Length=21493 Score = 208 bits (230), Expect = 9e-49 Identities = 273/378 (72%), Gaps = 9/378 (2%) Strand=Plus/Plus Query 124033 TGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAAC 124092 || || |||| ||| ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct 10671 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 10730 Query 124093 TTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTT 124152 ||||||||| ||||| | | ||| | || |||| |||| || | | || | Sbjct 10731 TTCCATACCAAAGTTAGTACGGTTAATAATATCAGCCCAAGTATTAATAACACGCCCTTG 10790 Query 124153 AGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212 | |||||| ||||||||||| || ||||||||||| | |||||| ||||| |||| || Sbjct 10791 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAAT 10850 Query 124213 ACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACT 124272 ||| | || || ||||| | || ||| || || || | |||| |||||| || | | Sbjct 10851 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 10910 Query 124273 TCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGC 124332 | || |||||||| || ||||||| | || ||||| ||||| || || || Sbjct 10911 ACGAGAATTGTTGAA--------AC-GGAAGATCAATCGGCCAAAATAACCATGAGCAGC 10961 Query 124333 TACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTG 124392 ||| |||||||| |||| ||||||||| ||||| | ||||| | || || || | Sbjct 10962 TACAATGTTGTAAGTTTATTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATT 11021 Query 124393 CTCTGTTGTTTCTCTGAT 124410 ||| | ||||| ||||| Sbjct 11022 TTCTATGGTTTCCCTGAT 11039 >seq7 Length=24649197 Score = 131 bits (144), Expect = 2e-25 Identities = 172/234 (74%), Gaps = 16/234 (7%) Strand=Plus/Minus Query 139315 CTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTT 139374 |||| || || |||||||| || || |||||||| || ||||||||||| |||||||| | Sbjct 3494811 CTTGAGCAGTACAGATGTTGCTAGTGGCTTTGTCCCTCCTAATATGCTGTTCTCTAGTCT 3494752 Query 139375 GTAGTGCTAATCTGTATGCAG-GATTGCCTTCGCTG-----TCCACTGACTGA--CCTAC 139426 | | || | || |||| | |||| ||| ||| || || ||| | || | Sbjct 3494751 GCATAGCCA-----TACGCAGAGCTTGCTTTC-CTGAAGAATCAAC--ACTAATACCAAT 3494700 Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486 ||| || ||||| ||| |||||||||||| | || || || ||||| ||||||||||| Sbjct 3494699 AATCCTCCCAGGCATCATTCTCTTATACTCTTGTGAAGTAGCCAAGAACGCAGCATGAGG 3494640 Query 139487 ACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 ||||| || ||||| |||| |||||||||||| ||| ||| ||||||| Sbjct 3494639 GCCTCCATAACCCATCGGAACACCAAACCTTTGAGCCGAACCAACAACAATATC 3494586 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||||| | ||| || |||||||| ||||| | |||||||| ||||||||||| Sbjct 3496671 AAATGGTGCCAAATGATTCTTCACACCAATGGGACCCATACCAGGACCACCACCTCCATG 3496612 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||||||||||| ||||| || | ||| ||||| || ||||| || ||| Sbjct 3496611 AGGAATACAGAAGGTCTTGTGGAGATTGAGATGGCACACATCCGCTCCA 3496563 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||||||||| || || || || ||||||| | || || || || | || || | || Sbjct 3494270 CATTGCCTCCGCAGCAGCGGTCCCTTCATCCAGAAGCGAAGCATTCGACATAGGAAGCCC 3494211 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || ||||| | ||| ||| |||||| | | ||| | | |||||||| || Sbjct 3494210 GGTGAGATCGGTGATCACCGTCTGGAAATTGAGCAGCGATTCGAGACGACCCTGAGAGAT 3494151 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||||||||| |||||||| ||||||||| |||||||| Sbjct 3494150 CTCAGCTTGATAAGGAGTGTATTGAGTGTACCAAGCTGGATTCTC 3494106 >seq4 Length=23328337 Score = 109 bits (120), Expect = 6e-19 Identities = 169/234 (72%), Gaps = 18/234 (8%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || || |||||||| ||||| ||||| || || | |||||||| || ||||| || Sbjct 5644138 TGAGCGGTACAGATGTTGCTGGTAGCTTTATCCCTGCGGATATGCTGTTCCCTAGTCTGC 5644197 Query 139377 AGTGCTAATCTGTATGCAG-GATTGCCTTCGCTG-----TC--CACTGACTGACCTACAA 139428 | || | || ||| | |||| ||| | | || |||| || ||| | || Sbjct 5644198 ATAGCCA-----TACGCAAAGCTTGC-TTCCCGGAAGAATCAACACTAAC--ACCAATAA 5644249 Query 139429 TTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGAC 139488 |||| ||||| ||| |||||||||||| | || || || ||||| ||||||||||||| Sbjct 5644250 TTCTCCCAGGCATCATTCTCTTATACTCTTGTGAAGTAGCCAAGAAAGCAGCATGAGGAC 5644309 Query 139489 CTCCGTATCCCATAGGAATACCAAACCTTTGCATACTA-CCTACAGCAATATCA 139541 | || || ||||| |||| ||||||||| || | | | || ||| |||||||| Sbjct 5644310 CACCATAACCCATGGGAACACCAAACCTCTG-ACCCGACCCAACAACAATATCA 5644362 Score = 100 bits (110), Expect = 3e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || || || ||||||| | | || ||||| | || ||||| || Sbjct 5644677 CATCGCTTCCGCAGCCGCCGTACCTTCATCAAGCAACGAAGCGTTCGACATCGGTAAACC 5644736 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || || | ||| |||||||||| |||| ||| | ||||| ||||| || Sbjct 5644737 GGTGAGATCAGTAATAACCGTCTGGTAATTGAGCAAAGATTCAAGCCTTCCTTGAGAAAT 5644796 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGC 140036 |||||||||||| ||||| || || |||||| ||||||||| | || || ||| Sbjct 5644797 CTCAGCTTGATAAGGAGTATATTGAGTATACCAAGCAGGATTCTCCATAATATTACGC 5644854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993362713920