Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq696 535 5e-147
seq2 390 1e-103
seq74 208 9e-49
seq7 131 2e-25
seq4 109 6e-19
>seq696
Length=154923
Score = 535 bits (592), Expect = 5e-147
Identities = 720/1000 (72%), Gaps = 2/1000 (0%)
Strand=Plus/Plus
Query 124033 TGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAAC 124092
|| || |||| ||| ||||||||||| ||||||||||| ||||| | ||||||||||||
Sbjct 372 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 431
Query 124093 TTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTT 124152
||||||||| | ||| || | ||| | || |||| |||| || | | ||| |
Sbjct 432 TTCCATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTG 491
Query 124153 AGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212
| |||||| ||||||||||| || ||||||||||| | |||||| ||||| || | ||
Sbjct 492 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAAT 551
Query 124213 ACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACT 124272
||| | || || ||||| | || ||| || || || | |||| |||||| || | |
Sbjct 552 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 611
Query 124273 TCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGC 124332
| || |||||||| |||||| |||||||| | || ||||| |||||||| || ||
Sbjct 612 ACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGC 671
Query 124333 TACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTG 124392
||| |||||||| |||||||||||||| ||||| | ||||| | || || || |
Sbjct 672 TACAATGTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATT 731
Query 124393 CTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAA 124452
||||| ||||| ||||| | | ||| || || | ||||||||||| || || |
Sbjct 732 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAG 791
Query 124453 AGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATG 124512
|| || ||||| | || ||||| ||| |||||| || || ||||| |||||||| ||
Sbjct 792 GGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTG 851
Query 124513 CTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATC 124572
||| || ||||| || | |||||||||||||||||| ||||| || || |||||||||||
Sbjct 852 CTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 911
Query 124573 AGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGG 124632
||| || |||||||||| ||| || | ||||| ||||| ||||| | || ||
Sbjct 912 AGAAAAACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGG 971
Query 124633 TGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTG 124692
|||||||| ||||| |||||||||||||| || | | | | ||||||||||
Sbjct 972 AGCTGAATATGCAACCGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTC 1031
Query 124693 TCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACC 124752
| ||||| || | | ||||| | ||||| | || | | | |||||||||
Sbjct 1032 ACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACC 1091
Query 124753 ACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCC 124812
||| || || | |||||||||||| | ||| ||||||||||| ||||| || || | ||
Sbjct 1092 ACCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACC 1151
Query 124813 GATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAA-AG 124871
||||| || | |||| || ||||| || || || ||||| || || ||||| ||
Sbjct 1152 AATAGCTGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTA-AAGAAGAG 1210
Query 124872 AACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAA 124931
| || | || ||||| | || || || ||||| || ||||| || ||||| ||||| |
Sbjct 1211 ATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGA 1270
Query 124932 CGATGAAACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAA 124991
|| ||| | | ||| || | |||| || ||||| | |||||||||||| ||||
Sbjct 1271 TAATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAA 1330
Query 124992 CATAAATTCTGTTGTTTGTTGATGTTACCCACTCACAGAA 125031
|||| | ||| | || |||| ||| | ||||||
Sbjct 1331 TGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1370
Score = 385 bits (426), Expect = 6e-102
Identities = 708/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||||| || || || ||||||| || || ||||| || ||
Sbjct 33734 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 33675
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | |||||| || || ||||||||
Sbjct 33674 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 33615
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || ||||| ||||| ||||| | || || || || || ||||| || || |
Sbjct 33614 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 33555
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | |||||||| || | || | || |||| | ||| | || || ||
Sbjct 33554 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 33495
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || |||||
Sbjct 33494 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 33435
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | ||| || || | ||| |||||||||||| | || || || | || ||
Sbjct 33434 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 33375
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| | || ||| || ||||| | || ||
Sbjct 33374 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 33336
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||||||||||| || ||||| | || | || |||| || || ||
Sbjct 33335 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 33276
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| |||||||| || || || ||||| | || | ||| |
Sbjct 33275 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 33216
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || || || ||||| || || || |||||||||| |||||||||||
Sbjct 33215 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 33156
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| || || |||| | || || || || | |||||||||||| ||| || ||
Sbjct 33155 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 33096
Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585
||||| | ||| || || | |||||||| | | ||| |||||||| | | |
Sbjct 33095 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 33036
Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645
|| | || || | || ||||| ||||||||| || | ||| |||||||| ||
Sbjct 33035 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 32976
Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705
||||||||||||||| ||||| || |||| | | ||| | | | | ||||
Sbjct 32975 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 32916
Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765
|| || ||||| || ||||| || || || || | ||| ||| || | |||||
Sbjct 32915 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 32856
Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825
||||||||||| || || ||||| || ||| ||||||||| || | | | ||| ||
Sbjct 32855 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 32796
Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885
|||||| | || || ||||||||||| |||| || || || || || ||| ||||||
Sbjct 32795 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 32736
Query 123886 GTCGTCAAGAACATCAAA 123903
||| || | || ||||||
Sbjct 32735 GTCATCCATAATATCAAA 32718
>seq2
Length=19320864
Score = 390 bits (432), Expect = 1e-103
Identities = 709/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||||| || || || ||||||| || || ||||| || ||
Sbjct 9135811 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 9135752
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | |||||| || || ||||||||
Sbjct 9135751 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 9135692
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || ||||| ||||| ||||| | || || || || || ||||| || || |
Sbjct 9135691 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 9135632
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | |||||||| || | || | || |||| | ||| | || || ||
Sbjct 9135631 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 9135572
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || |||||
Sbjct 9135571 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 9135512
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || ||||| || || | ||| |||||||||||| | || || || | || ||
Sbjct 9135511 CCAAAAGCTGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 9135452
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| | || ||| || ||||| | || ||
Sbjct 9135451 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 9135413
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||||||||||| || ||||| | || | || |||| || || ||
Sbjct 9135412 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 9135353
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| |||||||| || || || ||||| | || | ||| |
Sbjct 9135352 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 9135293
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || || || ||||| || || || |||||||||| |||||||||||
Sbjct 9135292 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 9135233
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| || || |||| | || || || || | |||||||||||| ||| || ||
Sbjct 9135232 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 9135173
Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585
||||| | ||| || || | |||||||| | | ||| |||||||| | | |
Sbjct 9135172 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 9135113
Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645
|| | || || | || ||||| ||||||||| || | ||| |||||||| ||
Sbjct 9135112 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 9135053
Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705
||||||||||||||| ||||| || |||| | | ||| | | | | ||||
Sbjct 9135052 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 9134993
Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765
|| || ||||| || ||||| || || || || | ||| ||| || | |||||
Sbjct 9134992 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 9134933
Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825
||||||||||| || || ||||| || ||| ||||||||| || | | | ||| ||
Sbjct 9134932 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 9134873
Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885
|||||| | || || ||||||||||| |||| || || || || || ||| ||||||
Sbjct 9134872 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 9134813
Query 123886 GTCGTCAAGAACATCAAA 123903
||| || | || ||||||
Sbjct 9134812 GTCATCCATAATATCAAA 9134795
Score = 385 bits (426), Expect = 6e-102
Identities = 708/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Plus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||||| || || || ||||||| || || ||||| || ||
Sbjct 8802668 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 8802727
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | |||||| || || ||||||||
Sbjct 8802728 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 8802787
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || ||||| ||||| ||||| | || || || || || ||||| || || |
Sbjct 8802788 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 8802847
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | |||||||| || | || | || |||| | ||| | || || ||
Sbjct 8802848 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 8802907
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || |||||
Sbjct 8802908 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 8802967
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | ||| || || | ||| |||||||||||| | || || || | || ||
Sbjct 8802968 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 8803027
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| | || ||| || ||||| | || ||
Sbjct 8803028 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 8803066
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||||||||||| || ||||| | || | || |||| || || ||
Sbjct 8803067 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 8803126
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| |||||||| || || || ||||| | || | ||| |
Sbjct 8803127 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 8803186
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || || || ||||| || || || |||||||||| |||||||||||
Sbjct 8803187 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 8803246
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| || || |||| | || || || || | |||||||||||| ||| || ||
Sbjct 8803247 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 8803306
Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585
||||| | ||| || || | |||||||| | | ||| |||||||| | | |
Sbjct 8803307 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 8803366
Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645
|| | || || | || ||||| ||||||||| || | ||| |||||||| ||
Sbjct 8803367 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 8803426
Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705
||||||||||||||| ||||| || |||| | | ||| | | | | ||||
Sbjct 8803427 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 8803486
Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765
|| || ||||| || ||||| || || || || | ||| ||| || | |||||
Sbjct 8803487 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 8803546
Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825
||||||||||| || || ||||| || ||| ||||||||| || | | | ||| ||
Sbjct 8803547 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 8803606
Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885
|||||| | || || ||||||||||| |||| || || || || || ||| ||||||
Sbjct 8803607 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 8803666
Query 123886 GTCGTCAAGAACATCAAA 123903
||| || | || ||||||
Sbjct 8803667 GTCATCCATAATATCAAA 8803684
Score = 354 bits (392), Expect = 9e-93
Identities = 700/1038 (67%), Gaps = 41/1038 (4%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||||| || || || ||||||| || || ||||| || ||
Sbjct 12219219 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 12219160
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | |||||| || || ||||||||
Sbjct 12219159 ATCTTGAGCCGTCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 12219100
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || ||||| ||||| ||||| | || || | || |||||||| || || |
Sbjct 12219099 AGTCTCAAATTCTGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCACG 12219040
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | |||||||| || | || | || |||| | ||| | || || ||
Sbjct 12219039 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 12218980
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || |||||
Sbjct 12218979 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 12218920
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | ||| || || | ||| |||||||||||| | || || || | || ||
Sbjct 12218919 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 12218860
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| ||| ||| | |||||| | || ||
Sbjct 12218859 ACGGAA---TGTA-TTTG-----CACCATCACCA------------TCTTCAAATAAAGT 12218821
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||| ||||||| || ||||| | || | || |||| || || ||
Sbjct 12218820 ATTTTCTACAGTAGCAACATGAATAGCGCATAGCAGAGCCGCGCCAAGTACACCGGCGAC 12218761
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| |||||||| || || || ||||| | || | ||| |
Sbjct 12218760 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 12218701
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || || || ||||| || || || |||||||||| |||||||||||
Sbjct 12218700 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 12218641
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| || || |||| | || || || || | |||||||||||| ||| || ||
Sbjct 12218640 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 12218581
Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585
|||| | ||| || || | |||||||| | | ||| |||||||| | | |
Sbjct 12218580 TGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 12218521
Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645
|| | || || | || ||||| ||||||||| || | ||| |||||||| ||
Sbjct 12218520 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 12218461
Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705
||||||||||||||| ||||| || || || || | ||||
Sbjct 12218460 ATCTCCTTGTGCTTCAGGACCCCACAG-----------TAGGA--------GT-AGCAGG 12218421
Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765
|| || ||||| || ||||| || || || || | ||| ||| || | |||||
Sbjct 12218420 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 12218361
Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825
||||||||||| || || ||||| || ||| ||||||||| || | | | ||| ||
Sbjct 12218360 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 12218301
Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885
|||||| | || || ||||||||||| |||| || || || || || ||| ||||||
Sbjct 12218300 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 12218241
Query 123886 GTCGTCAAGAACATCAAA 123903
||| || | || ||||||
Sbjct 12218240 GTCATCCATAATATCAAA 12218223
Score = 86.0 bits (94), Expect = 7e-12
Identities = 167/244 (68%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 124789 CCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGAT 124848
|||||| ||||| || || | || ||||| || | |||| || ||||| || ||
Sbjct 8835271 CCAGATCGGGTAAAAATGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCGGAAAT 8835212
Query 124849 GATGTTGTTACCATATAAGAA-AGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGA 124907
|| ||||| || || ||||| ||| || | || ||||| | || || || ||||| |
Sbjct 8835211 AATATTGTTTCCGTA-AAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTA 8835153
Query 124908 CAGGAGGTGCTGCAATAAATGCAACGATGAAACATGCTGCTGCTGTGAGTAAGCATGGAA 124967
| ||||| || ||||| ||||| | | ||| | | ||| || | |||| || |
Sbjct 8835152 CTGGAGGAGCAGCAATGAATGCGATAACAAAAACGGAAGTTGCGGTCAATAAGGTAGGGA 8835093
Query 124968 TCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTTGTTGATGTTACCCACTCAC 125027
|||| | |||||||||||| |||| |||| | ||| | || |||| ||| | ||
Sbjct 8835092 TCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTAC 8835033
Query 125028 AGAA 125031
||||
Sbjct 8835032 AGAA 8835029
>seq74
Length=21493
Score = 208 bits (230), Expect = 9e-49
Identities = 273/378 (72%), Gaps = 9/378 (2%)
Strand=Plus/Plus
Query 124033 TGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAAC 124092
|| || |||| ||| ||||||||||| ||||||||||| ||||| | ||||||||||||
Sbjct 10671 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 10730
Query 124093 TTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTT 124152
||||||||| ||||| | | ||| | || |||| |||| || | | || |
Sbjct 10731 TTCCATACCAAAGTTAGTACGGTTAATAATATCAGCCCAAGTATTAATAACACGCCCTTG 10790
Query 124153 AGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212
| |||||| ||||||||||| || ||||||||||| | |||||| ||||| |||| ||
Sbjct 10791 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAAT 10850
Query 124213 ACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACT 124272
||| | || || ||||| | || ||| || || || | |||| |||||| || | |
Sbjct 10851 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 10910
Query 124273 TCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGC 124332
| || |||||||| || ||||||| | || ||||| ||||| || || ||
Sbjct 10911 ACGAGAATTGTTGAA--------AC-GGAAGATCAATCGGCCAAAATAACCATGAGCAGC 10961
Query 124333 TACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTG 124392
||| |||||||| |||| ||||||||| ||||| | ||||| | || || || |
Sbjct 10962 TACAATGTTGTAAGTTTATTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATT 11021
Query 124393 CTCTGTTGTTTCTCTGAT 124410
||| | ||||| |||||
Sbjct 11022 TTCTATGGTTTCCCTGAT 11039
>seq7
Length=24649197
Score = 131 bits (144), Expect = 2e-25
Identities = 172/234 (74%), Gaps = 16/234 (7%)
Strand=Plus/Minus
Query 139315 CTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTT 139374
|||| || || |||||||| || || |||||||| || ||||||||||| |||||||| |
Sbjct 3494811 CTTGAGCAGTACAGATGTTGCTAGTGGCTTTGTCCCTCCTAATATGCTGTTCTCTAGTCT 3494752
Query 139375 GTAGTGCTAATCTGTATGCAG-GATTGCCTTCGCTG-----TCCACTGACTGA--CCTAC 139426
| | || | || |||| | |||| ||| ||| || || ||| | || |
Sbjct 3494751 GCATAGCCA-----TACGCAGAGCTTGCTTTC-CTGAAGAATCAAC--ACTAATACCAAT 3494700
Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486
||| || ||||| ||| |||||||||||| | || || || ||||| |||||||||||
Sbjct 3494699 AATCCTCCCAGGCATCATTCTCTTATACTCTTGTGAAGTAGCCAAGAACGCAGCATGAGG 3494640
Query 139487 ACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540
||||| || ||||| |||| |||||||||||| ||| ||| |||||||
Sbjct 3494639 GCCTCCATAACCCATCGGAACACCAAACCTTTGAGCCGAACCAACAACAATATC 3494586
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220
|||||||| | ||| || |||||||| ||||| | |||||||| |||||||||||
Sbjct 3496671 AAATGGTGCCAAATGATTCTTCACACCAATGGGACCCATACCAGGACCACCACCTCCATG 3496612
Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269
||||||||||| ||||| || | ||| ||||| || ||||| || |||
Sbjct 3496611 AGGAATACAGAAGGTCTTGTGGAGATTGAGATGGCACACATCCGCTCCA 3496563
Score = 91.5 bits (100), Expect = 2e-13
Identities = 119/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||||||||| || || || || ||||||| | || || || || | || || | ||
Sbjct 3494270 CATTGCCTCCGCAGCAGCGGTCCCTTCATCCAGAAGCGAAGCATTCGACATAGGAAGCCC 3494211
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| || || ||||| | ||| ||| |||||| | | ||| | | |||||||| ||
Sbjct 3494210 GGTGAGATCGGTGATCACCGTCTGGAAATTGAGCAGCGATTCGAGACGACCCTGAGAGAT 3494151
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023
|||||||||||| |||||||| ||||||||| ||||||||
Sbjct 3494150 CTCAGCTTGATAAGGAGTGTATTGAGTGTACCAAGCTGGATTCTC 3494106
>seq4
Length=23328337
Score = 109 bits (120), Expect = 6e-19
Identities = 169/234 (72%), Gaps = 18/234 (8%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| || || |||||||| ||||| ||||| || || | |||||||| || ||||| ||
Sbjct 5644138 TGAGCGGTACAGATGTTGCTGGTAGCTTTATCCCTGCGGATATGCTGTTCCCTAGTCTGC 5644197
Query 139377 AGTGCTAATCTGTATGCAG-GATTGCCTTCGCTG-----TC--CACTGACTGACCTACAA 139428
| || | || ||| | |||| ||| | | || |||| || ||| | ||
Sbjct 5644198 ATAGCCA-----TACGCAAAGCTTGC-TTCCCGGAAGAATCAACACTAAC--ACCAATAA 5644249
Query 139429 TTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGAC 139488
|||| ||||| ||| |||||||||||| | || || || ||||| |||||||||||||
Sbjct 5644250 TTCTCCCAGGCATCATTCTCTTATACTCTTGTGAAGTAGCCAAGAAAGCAGCATGAGGAC 5644309
Query 139489 CTCCGTATCCCATAGGAATACCAAACCTTTGCATACTA-CCTACAGCAATATCA 139541
| || || ||||| |||| ||||||||| || | | | || ||| ||||||||
Sbjct 5644310 CACCATAACCCATGGGAACACCAAACCTCTG-ACCCGACCCAACAACAATATCA 5644362
Score = 100 bits (110), Expect = 3e-16
Identities = 129/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| || || || || || || ||||||| | | || ||||| | || ||||| ||
Sbjct 5644677 CATCGCTTCCGCAGCCGCCGTACCTTCATCAAGCAACGAAGCGTTCGACATCGGTAAACC 5644736
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| || || || || | ||| |||||||||| |||| ||| | ||||| ||||| ||
Sbjct 5644737 GGTGAGATCAGTAATAACCGTCTGGTAATTGAGCAAAGATTCAAGCCTTCCTTGAGAAAT 5644796
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGC 140036
|||||||||||| ||||| || || |||||| ||||||||| | || || |||
Sbjct 5644797 CTCAGCTTGATAAGGAGTATATTGAGTATACCAAGCAGGATTCTCCATAATATTACGC 5644854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578993362713920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |