Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq696 569 3e-157 seq2 524 1e-143 seq74 168 9e-37 seq1 120 4e-22 >seq696 Length=154923 Score = 569 bits (630), Expect = 3e-157 Identities = 722/993 (73%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 26724 CTCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAA 26783 |||| ||||||| || || | || || || || || || | ||| || || || || | Sbjct 378 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 437 Query 26784 TCCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATC 26843 ||||| ||||||||| | || || |||||||| || | ||||| || || ||| Sbjct 438 ACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATC 497 Query 26844 AATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAG 26903 || || || || ||||| |||||||| || || ||||||||||| || | ||| | Sbjct 498 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAA 557 Query 26904 TGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGA 26963 || || ||||| || || || || ||||| || || | |||||| || || ||||| || Sbjct 558 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 617 Query 26964 GTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGAT 27023 |||||||| |||||||||||||||||| || || || || || || || || || || Sbjct 618 ATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 677 Query 27024 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGT 27083 |||||| || ||||||||||| ||||| | ||||| | || || ||| |||| || Sbjct 678 GTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 737 Query 27084 CGTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCC 27143 || || | || | ||| || |||| || ||||||||| ||||| || || Sbjct 738 GGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAGGGAGCC 797 Query 27144 ACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGC 27203 |||||||| ||||| ||||| | |||||| || ||||||||||| || ||||| || || Sbjct 798 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGC 857 Query 27204 CTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAA 27263 ||||||||||| ||| |||| |||||||||||||| || ||||||||| |||| || || Sbjct 858 CTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAA 917 Query 27264 AGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGA 27323 | || ||||| | ||||||| | ||| || ||| ||||||| || || ||||| || Sbjct 918 ACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGA 977 Query 27324 ATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCC 27383 |||||| || ||||| ||||||||||| | ||| | |||||||||||||| || Sbjct 978 ATATGCAACCGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 1037 Query 27384 CATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTT 27443 ||||||| | | || | | ||||| | || | |||| ||||||||||||| Sbjct 1038 CATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1097 Query 27444 ATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGC 27503 || | ||| ||||| | ||||| ||||||||||| ||||| || || | ||| || || Sbjct 1098 GTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAGC 1157 Query 27504 ATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGC 27563 ||| | || | || ||||| ||||| || ||||| || || | ||| || |||| Sbjct 1158 TGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGA 1217 Query 27564 AACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA 27623 ||| |||||||||||||| |||||||| || || || || || |||||||||| ||| || Sbjct 1218 AACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAA 1277 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 | |||||| | || | || |||||||||| ||||| ||||| |||| || | Sbjct 1278 AACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1337 Query 27684 ACGGTTGTTAGTTGATGTCACCCACTCACAGAA 27716 |||||| | ||| || | ||| | |||||| Sbjct 1338 ACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1370 Score = 524 bits (580), Expect = 1e-143 Identities = 729/1019 (72%), Gaps = 2/1019 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 33735 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 33676 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| || |||| Sbjct 33675 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGA 33616 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | |||||| || ||||| || || || || || ||||| |||| Sbjct 33615 AAGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 33556 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || | ||| || || | | |||| || | | ||| | ||| | || || | Sbjct 33555 GTAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTA 33496 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||||| Sbjct 33495 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTG 33436 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 33435 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 33376 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || |||||| | |||| Sbjct 33375 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCAT 33316 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || || || | ||||||| ||| || |||||||||||||| || |||| Sbjct 33315 GAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGT 33256 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || ||||| |||| Sbjct 33255 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 33196 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| || || || | ||||| || ||||| ||||| | Sbjct 33195 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAA 33136 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || || || | | || ||| Sbjct 33135 CAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGAT 33077 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| |||||||||||||||||||| | ||| || || |||||||||||| Sbjct 33076 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCA 33017 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 33016 ACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 32957 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| |||| | | |||||| | | | | |||||| || || || || || || Sbjct 32956 CCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTT 32897 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | ||| || ||| || | ||||||||| || | |||||| || ||||| || ||| Sbjct 32896 AAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACA 32837 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 32836 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGA 32777 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || ||||| |||| | |||||| |||| || ||||| Sbjct 32776 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 32718 >seq2 Length=19320864 Score = 524 bits (580), Expect = 1e-143 Identities = 729/1019 (72%), Gaps = 2/1019 (0%) Strand=Plus/Plus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 8802667 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 8802726 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| || |||| Sbjct 8802727 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGA 8802786 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | |||||| || ||||| || || || || || ||||| |||| Sbjct 8802787 AAGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 8802846 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || | ||| || || | | |||| || | | ||| | ||| | || || | Sbjct 8802847 GTAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTA 8802906 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||||| Sbjct 8802907 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTG 8802966 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 8802967 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 8803026 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || |||||| | |||| Sbjct 8803027 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCAT 8803086 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || || || | ||||||| ||| || |||||||||||||| || |||| Sbjct 8803087 GAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGT 8803146 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || ||||| |||| Sbjct 8803147 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 8803206 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| || || || | ||||| || ||||| ||||| | Sbjct 8803207 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAA 8803266 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || || || | | || ||| Sbjct 8803267 CAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAA-CAGAT 8803325 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| |||||||||||||||||||| | ||| || || |||||||||||| Sbjct 8803326 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCA 8803385 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 8803386 ACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 8803445 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| |||| | | |||||| | | | | |||||| || || || || || || Sbjct 8803446 CCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTT 8803505 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | ||| || ||| || | ||||||||| || | |||||| || ||||| || ||| Sbjct 8803506 AAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACA 8803565 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 8803566 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGA 8803625 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || ||||| |||| | |||||| |||| || ||||| Sbjct 8803626 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 8803684 Score = 518 bits (574), Expect = 4e-142 Identities = 728/1019 (71%), Gaps = 2/1019 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 9135812 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 9135753 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| || |||| Sbjct 9135752 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGA 9135693 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | |||||| || ||||| || || || || || ||||| |||| Sbjct 9135692 AAGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 9135633 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || | ||| || || | | |||| || | | ||| | ||| | || || | Sbjct 9135632 GTAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTA 9135573 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||||| Sbjct 9135572 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTG 9135513 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| | || || || ||||| ||||| || || || | ||||| | | || | Sbjct 9135512 ACCAAAAGCTGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 9135453 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || |||||| | |||| Sbjct 9135452 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCAT 9135393 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || || || | ||||||| ||| || |||||||||||||| || |||| Sbjct 9135392 GAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGT 9135333 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || ||||| |||| Sbjct 9135332 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 9135273 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| || || || | ||||| || ||||| ||||| | Sbjct 9135272 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAA 9135213 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || || || | | || ||| Sbjct 9135212 CAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGAT 9135154 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| |||||||||||||||||||| | ||| || || |||||||||||| Sbjct 9135153 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCA 9135094 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 9135093 ACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 9135034 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| |||| | | |||||| | | | | |||||| || || || || || || Sbjct 9135033 CCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTT 9134974 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | ||| || ||| || | ||||||||| || | |||||| || ||||| || ||| Sbjct 9134973 AAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACA 9134914 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 9134913 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGA 9134854 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || ||||| |||| | |||||| |||| || ||||| Sbjct 9134853 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 9134795 Score = 488 bits (540), Expect = 7e-133 Identities = 718/1019 (70%), Gaps = 22/1019 (2%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 12219220 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 12219161 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | ||||||| |||| | || | ||| || | ||||||||| || |||| Sbjct 12219160 GATCTTGAGCCGTCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGA 12219101 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | |||||| || |||| || || | ||||| ||||| |||| Sbjct 12219100 AAGTCTCAAATTCTGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCAC 12219041 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || | ||| || || | | |||| || | | ||| | ||| | || || | Sbjct 12219040 GTAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTA 12218981 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||||| Sbjct 12218980 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTG 12218921 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 12218920 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 12218861 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || |||||| | ||| Sbjct 12218860 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCAACAT 12218801 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || || || | || |||| ||| || |||||||||||||| || |||| Sbjct 12218800 GAATAGCGCATAGCAGAGCCGCGCCAAGTACACCGGCGACTCCCATCATATGAAATGGGT 12218741 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || ||||| |||| Sbjct 12218740 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 12218681 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| || || || | ||||| || ||||| ||||| | Sbjct 12218680 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAA 12218621 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || || || | | || ||| Sbjct 12218620 CAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATATGGTCGCAATTGAAC-AGAT 12218562 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| |||||||||||||||||||| | ||| || || |||||||||||| Sbjct 12218561 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCA 12218502 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 12218501 ACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 12218442 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| ||||| || |||||| || || || || || || Sbjct 12218441 CCCCACAGTAGGAG--------------------TAGCAGGAGTAGAAACTGCAGCGGTT 12218402 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | ||| || ||| || | ||||||||| || | |||||| || ||||| || ||| Sbjct 12218401 AAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACA 12218342 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 12218341 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGA 12218282 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || ||||| |||| | |||||| |||| || ||||| Sbjct 12218281 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 12218223 Score = 143 bits (158), Expect = 4e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 32621 TCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACA 32680 ||||||| | |||||||| ||||||||||||| ||||| ||| |||||||||| ||| Sbjct 2824367 TCTTCTTTGTGGGTTTCAATGGTAACATCAGAAGTAGGATAAGCAGCACAAGTGAGAACA 2824426 Query 32681 AACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCA 32740 ||||||| |||| || |||||||| | ||| ||| ||| || || || | ||| Sbjct 2824427 AACCCTTGACCAATCTGCTCATCATCAAGGAAACTCTGGTCAGACTGATCAACAGATCCA 2824486 Query 32741 GATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCA 32800 || |||| ||||| ||||| |||||| | ||| ||||| |||||||| ||||| Sbjct 2824487 GACACAACTTTACCAGCACAGCTTGAACAAGAACCAGCACGGCAAGAGTATGGCAAATCG 2824546 Query 32801 ACCCCACCTTCCTCTGCTGCATCAAGGATGTA 32832 | ||| ||||||| || || ||||| | ||| Sbjct 2824547 ATTCCAGCTTCCTCGGCCGCGTCAAGAACGTA 2824578 Score = 132 bits (146), Expect = 6e-26 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 27474 CCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAAT 27533 |||||| ||||| || || | ||| || || ||| | || | || ||||| ||||| Sbjct 8835271 CCAGATCGGGTAAAAATGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCGGAAAT 8835212 Query 27534 GATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGAC 27593 || ||||| || || | ||| || |||| ||| |||||||||||||| |||||||| || Sbjct 8835211 AATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTAC 8835152 Query 27594 GGGTGGTGCTGCGATGAATGCGACAATGAAGCAGACAGTTGCTGCTAACAGTGTTGGGAT 27653 || || || || |||||||||| || || | |||||| | || | || ||||| Sbjct 8835151 TGGAGGAGCAGCAATGAATGCGATAACAAAAACGGAAGTTGCGGTCAATAAGGTAGGGAT 8835092 Query 27654 CATCAGTACACCGAACCAACCAACATACAAACGGTTGTTAGTTGATGTCACCCACTCACA 27713 ||||| ||||| ||||| |||| || | |||||| | ||| || | ||| | ||| Sbjct 8835091 CATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACA 8835032 Query 27714 GAA 27716 ||| Sbjct 8835031 GAA 8835029 Score = 125 bits (138), Expect = 1e-23 Identities = 251/370 (68%), Gaps = 4/370 (1%) Strand=Plus/Plus Query 46986 GCGGGAAGAACATGCGAACTTTCTAGGTCAAAATTATCATTTGGACCATATAGGTTTGTA 47045 || ||||| ||||| ||| | || ||| |||||| ||||| |||||||| || || ||| Sbjct 15753399 GCAGGAAGCACATGAGAATTCTCCGGGTGAAAATTGTCATTAGGACCATAAAGATTAGTA 15753458 Query 47046 GGCATCAAAGAGATAGCATTAAATCCATACTGCTGATGGTATGCCTGACACATCTTGATA 47105 ||||| |||||| |||| |||| | ||| | || ||||| || |||| || Sbjct 15753459 GGCATGCCAGAGATCGCATCCCATCCGTGCTGAATCCGATAAGCCTGGCAAGTCTTAATC 15753518 Query 47106 CCAGCAATCTTTGCAATAGCATAAGAATCATTACTAGGTTCAAGAGGACCACTCATTAGA 47165 || || ||||| ||||||||||| | |||||| | |||||||| | | | | | | Sbjct 15753519 CCTGCGATCTTAGCAATAGCATACCACTCATTAGTTGGTTCAAGCGATGCGGTTAACAAA 15753578 Query 47166 TATTCTTCCCTAATAGGTTGTTCACATAATTTTGGATAAATGCAGGAAGAACCAAGAAAT 47225 || ||| || || | ||||| || |||||||||||||| ||||| || Sbjct 15753579 GCAGACTCAGGAATTGGCTGAGGAGCAAATTTGGGGTAAATGCAGGAAGATCCAAGGAAG 15753638 Query 47226 AAAAGTTTCTTAACACCAAACTTACGT--GCAGAATGAATGATGTTTGATTGAATCATCA 47283 | ||| ||||| ||||| || ||| ||||| || || | || | |||||| | Sbjct 15753639 AGAAGCTTCTTGACACCGTGCT--CGTAAGCAGAGTGGATCACATTGGTCTGAATCTGGA 15753696 Query 47284 AATTATCATAGATGAAGTGTCCGGGATAATCCTTATTAGCACCAATACCACCCACCTTTG 47343 ||| || ||||| | | |||||| || |||||| ||| ||||| || || | Sbjct 15753697 GATTGACACCAATGAAATCAGCAGGATAAGTGTTGTTAGCATGAATCCCACCAACTTTAG 15753756 Query 47344 CAGCAGCAAG 47353 | || || || Sbjct 15753757 CTGCTGCTAG 15753766 >seq74 Length=21493 Score = 168 bits (186), Expect = 9e-37 Identities = 238/336 (71%), Gaps = 9/336 (3%) Strand=Plus/Plus Query 26724 CTCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAA 26783 |||| ||||||| || || | || || || || || || | ||| || || || || | Sbjct 10677 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 10736 Query 26784 TCCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATC 26843 |||| || |||||| | || || |||||||| || | ||||| || || ||| Sbjct 10737 ACCAAAGTTAGTACGGTTAATAATATCAGCCCAAGTATTAATAACACGCCCTTGACTATC 10796 Query 26844 AATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAG 26903 || || || || ||||| |||||||| || || ||||||||||| ||| | ||| | Sbjct 10797 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAA 10856 Query 26904 TGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGA 26963 || || ||||| || || || || ||||| || || | |||||| || || ||||| || Sbjct 10857 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 10916 Query 26964 GTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGAT 27023 ||||||| | |||||||||| || || || || ||||| || || || || Sbjct 10917 ATTGTTGA---------AACGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAAT 10967 Query 27024 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACC 27059 |||||| || | ||||||||||||||| | ||||| Sbjct 10968 GTTGTAAGTTTATTCTTCTTGACCGAATCTGTAACC 11003 >seq1 Length=33132539 Score = 120 bits (132), Expect = 4e-22 Identities = 188/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 46995 ACATGCGAACTTTCTAGGTCAAAATTATCATTTGGACCATATAGGTTTGTAGGCATCAAA 47054 ||||| ||| | || ||| |||||||||||| |||| || || || || ||||| Sbjct 7516409 ACATGGGAATTCTCCGGGTGGAAATTATCATTTTGACCGTAGAGATTCGTGGGCATACCG 7516468 Query 47055 GAGATAGCATTAAATCCATACTGCTGATGGTATGCCTGACACATCTTGATACCAGCAATC 47114 ||||| |||| || || ||| | |||| || ||||||||||| || || || ||| Sbjct 7516469 GAGATGGCATCCCATTGATGCTGAAGCCGGTAAGCTTGACACATCTTAATCCCTGCGATC 7516528 Query 47115 TTTGCAATAGCATAAGAATCATTACTAGGTTCAAGAGGACCACTCATTAGATATTCTTCC 47174 || || || ||||| | || ||| | |||||||| || ||| | | || ||| Sbjct 7516529 TTGGCGATCGCATACCATTCGTTAGTCGGTTCAAGCGGGCCAGTGAGAAGCGCAGATTCG 7516588 Query 47175 CTAATAGGTTGTTCACATAATTTTGGATAAATGCAGGAAGAACCAAGAAATAAAAGTTTC 47234 ||| ||||| | ||||| || |||||||| || |||||||| || | |||||| Sbjct 7516589 GGAATCGGTTGAGGAGCGAATTTGGGGTAAATGCAAGAGGAACCAAGGAAGAGGAGTTTC 7516648 Query 47235 TTAACACCAAACTTACGTGCAGAATGAAT 47263 || |||||| |||| ||||| || || Sbjct 7516649 TTCACACCATGCTTATAAGCAGAGTGGAT 7516677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665488610198720