Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 2e-27
seq6 122 2e-22
seq4 122 2e-22
seq2 118 2e-21
seq7 114 2e-20
seq3 93.3 8e-14
>seq1
Length=33132539
Score = 138 bits (152), Expect = 2e-27
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||| ||||||| ||||| |||| ||| | || | |||||| ||| || || || |
Sbjct 10397125 ACCTCCTCTCAGACGAAGCACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGC 10397066
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| ||||| ||| || |||||||||||||| || ||||| | || ||||| || ||
Sbjct 10397065 GAGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGG 10397006
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
||||||||||| ||||| || || | ||| | ||| || || || || || |||||
Sbjct 10397005 GATTCCTTCTTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAAC 10396946
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366
||||| ||||| || || || ||||| ||||| || || || |||||||| ||
Sbjct 10396945 CTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTCTT 10396892
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| ||||| || ||||| | || | ||||| || || || ||
Sbjct 29080843 ATACCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCT 29080784
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| | ||| || | ||||| || || || |||| |||||||||||| |||
Sbjct 29080783 GCAAGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGA 29080724
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| || || | ||| | || ||| || || ||| |||
Sbjct 29080723 GGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTCTCG 29080664
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || |||||||| || ||||| || | ||||| |||||
Sbjct 29080663 ACTTCTAGGGTAATGGTTTTACCGGTGAGCGTCTTGATGAATATCTGCAT 29080614
>seq6
Length=25113588
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| || || |||||
Sbjct 905417 ATACCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCA 905476
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| || || | || || |||||||| || | |||||||| || |||
Sbjct 905477 GCAAGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGA 905536
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || || || || |||| ||| | ||| ||| || || ||| ||||
Sbjct 905537 GGAATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCA 905596
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || |||||||| || || || || ||||| || |||||
Sbjct 905597 ACCTCGAGGGTAATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 905646
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| ||||| |||||
Sbjct 10622319 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAGTCA 10622260
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| || | ||||| || || || || | |||||| || || ||
Sbjct 10622259 GCGAGTGTACGACCATCTTCAAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCTGGT 10622200
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| |||||||| || || || | ||| | ||| |||||| || ||| ||||
Sbjct 10622199 GGGATTCCCTCTTTATCCTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCA 10622140
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || |||||||| || | || || ||||| || |||||
Sbjct 10622139 ACCTCGAGAGTGATTGTTTTACCAGTCAATGTCTTCACAAAGATCTGCAT 10622090
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || ||||| |||| || | || | ||||| ||||| || |||
Sbjct 905873 ATACCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCG 905932
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| |||| ||||| ||||| || ||||||||||| || || |||
Sbjct 905933 GTCAAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGA 905992
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| || || || || ||||
Sbjct 905993 GGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 906052
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| ||||| ||||||||
Sbjct 906053 ACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 906102
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | || | |||||| || || |||||
Sbjct 8749005 ATACCACCTCTAAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCA 8749064
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| |||| || || || ||||| || | ||||| || || ||
Sbjct 8749065 GCCAGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGT 8749124
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| |||||||| || || || | ||| | ||| ||| || || || ||||
Sbjct 8749125 GGGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCA 8749184
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || |||||||| || || || || ||||| ||||||||
Sbjct 8749185 ACCTCTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATTTGCAT 8749234
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || ||||| |||| || | || | ||||| || || || |||
Sbjct 10622091 ATACCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCG 10622032
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | ||| |||| ||||| ||||| || |||||||| || || || ||
Sbjct 10622031 GCCAAAGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCTAGA 10621972
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| ||| || || || ||||
Sbjct 10621971 GGAATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 10621912
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| ||||| ||||||||
Sbjct 10621911 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACAAAAATTTGCAT 10621862
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| || || || | ||| | ||| || || || |||||
Sbjct 905645 ATACCACCACGAAGACGAAGGACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCA 905704
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| ||| || | || || |||||||| || | ||||| || || |||
Sbjct 905705 GCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 905764
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| || || || || | ||| | || |||||| || || ||||
Sbjct 905765 GGGATTCCTTCTTTGTCCTGAATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCA 905824
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | ||| || || || || || || || || ||||| || |||||
Sbjct 905825 ACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 905874
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || || || |||| ||| | ||| | ||||| ||||| || ||
Sbjct 8749461 ATACCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCA 8749520
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | ||| |||| || || || || || || ||||| || || || |||
Sbjct 8749521 GCCAAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGA 8749580
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| || || || || ||||
Sbjct 8749581 GGAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 8749640
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || ||||| || || ||||| ||||| | ||||||
Sbjct 8749641 ACCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 8749690
Score = 84.2 bits (92), Expect = 4e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || || ||||||||||| || || || ||||| || || ||||| || ||||| ||
Sbjct 22901048 ATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTT 22900989
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || |||| || | || |||||| || ||| ||| || || | || ||
Sbjct 22900988 ATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTGAT 22900929
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| || |||||
Sbjct 22900928 GGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893
>seq4
Length=23328337
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| || || |||||
Sbjct 15771338 ATACCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCA 15771397
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| || || | || || |||||||| || | |||||||| || |||
Sbjct 15771398 GCAAGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGA 15771457
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || || || || |||| ||| | ||| ||| || || ||| ||||
Sbjct 15771458 GGAATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCA 15771517
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || |||||||| || || || || ||||| || |||||
Sbjct 15771518 ACCTCGAGGGTAATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 15771567
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || ||||| |||| || | || | ||||| ||||| || |||
Sbjct 15771794 ATACCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCG 15771853
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| |||| ||||| ||||| || ||||||||||| || || |||
Sbjct 15771854 GCCAAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGA 15771913
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| || || || || ||||
Sbjct 15771914 GGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 15771973
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| ||||| ||||||||
Sbjct 15771974 ACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| || || || | ||| | ||| || || || |||||
Sbjct 15771566 ATACCACCACGAAGACGAAGGACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCA 15771625
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| ||| || | || || |||||||| || | ||||| || || |||
Sbjct 15771626 GCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 15771685
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| || || || || | ||| | || |||||| || || ||||
Sbjct 15771686 GGGATTCCTTCTTTGTCCTGAATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCA 15771745
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | ||| || || || || || || || || ||||| || |||||
Sbjct 15771746 ACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 15771795
>seq2
Length=19320864
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| || || || ||
Sbjct 9126471 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCA 9126530
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| ||| || | | ||| || | || || |||||||| || | |||||||||||| |||
Sbjct 9126531 GCTAAAGTACGACCATCCTCAAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGA 9126590
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | ||| |||||| || || ||||
Sbjct 9126591 GGGATACCTTCCTTGTCTTGAATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCA 9126650
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || || || || || || || || ||||| || |||||
Sbjct 9126651 ACCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 9126700
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | ||||| |||||| ||||| || ||
Sbjct 9126699 ATACCACCTCTAAGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCA 9126758
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | || || | || || || ||||| || | ||||| ||||| |||
Sbjct 9126759 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 9126818
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| ||||| || || || | ||| | ||| ||||||||| ||| |||
Sbjct 9126819 GGGATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCA 9126878
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || ||||| || || | ||| || ||||| || |||||
Sbjct 9126879 ACCTCCAAAGTAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 9126928
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | ||||| |||||| ||||| || ||
Sbjct 9215480 ATACCACCTCTAAGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCA 9215539
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | || || | || || || ||||| || | ||||| ||||| |||
Sbjct 9215540 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 9215599
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| ||||| || || || | ||| | ||| ||||||||| ||| |||
Sbjct 9215600 GGGATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCA 9215659
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || ||||| || || | ||| || ||||| || |||||
Sbjct 9215660 ACCTCCAAAGTAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 9215709
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || | || |||| ||| | ||| | || || ||||| || ||
Sbjct 9126927 ATACCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCT 9126986
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| ||||| ||||| || || || || |||||||| || ||||||
Sbjct 9126987 GCCAAGGTACGACCATCTTCTAACTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGA 9127046
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || || | || | ||| ||| || || || ||||
Sbjct 9127047 GGAATACCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 9127106
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| || || ||||||||
Sbjct 9127107 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 9127156
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || | || |||| ||| | ||| | || || ||||| || ||
Sbjct 9215708 ATACCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCT 9215767
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| ||||| ||||| || || || || |||||||| || ||||||
Sbjct 9215768 GCCAAGGTACGACCATCTTCTAACTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGA 9215827
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || || | || | ||| ||| || || || ||||
Sbjct 9215828 GGAATACCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 9215887
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| || || ||||||||
Sbjct 9215888 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 9215937
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||| || ||||| || | ||||||||| || || || || || || || || || ||
Sbjct 9214880 TGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATC 9214939
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|| | ||| | ||| |||||||||||| ||||| || | |||||| ||||| ||
Sbjct 9214940 TTAGCTTTAACATTATCGATAGTATCGGAACTTTCAACCTCCAAAGTTATGGTTTTCCCG 9214999
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || ||||| || |||||
Sbjct 9215000 GTAAGGGTCTTCACAAAGATCTGCAT 9215025
Score = 84.2 bits (92), Expect = 4e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||| || || || || | ||||||||| || || || || || || || || || ||
Sbjct 9126099 TGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATC 9126158
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|| | || | ||| |||||||||||| ||||| || | |||||| ||||| ||
Sbjct 9126159 TTAGCCTTAACATTATCGATAGTATCGGAACTTTCAACCTCCAAAGTTATGGTTTTCCCG 9126218
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || |||||||| || |||||
Sbjct 9126219 GTAAGGGTCTTTACAAAGATCTGCAT 9126244
>seq7
Length=24649197
Score = 114 bits (126), Expect = 2e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| || || || || || | ||||||||| || ||||| |||||||||||
Sbjct 18993743 ATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTT 18993802
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||||| || || | ||| | || ||| || || || ||||||||||||||| ||
Sbjct 18993803 GTCTTGAATCTTAGCTTTCACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAAT 18993862
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || ||||| |||||||| |||||
Sbjct 18993863 GGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 18993898
Score = 104 bits (114), Expect = 4e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
||||| |||| ||| | || | ||||| || || || || | || |||| | |
Sbjct 18993912 CGAAGAACCAAATGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCTAGGGTTCGACCA 18993971
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||| || || || || || | |||||| || || | ||| ||| |||| |||
Sbjct 18993972 TCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGCAGGGATTTCTTCCTTA 18994031
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || || | ||| | ||| ||| || || || |||||||||||| || ||
Sbjct 18994032 TCTTGAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATG 18994091
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| | || || || ||||| ||||||||||||||
Sbjct 18994092 GTTCTGCCAGTAAGGGTTTTCACAAATATTTGCAT 18994126
Score = 96.9 bits (106), Expect = 6e-15
Identities = 163/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || ||||||||||| | ||| |||| || | || | ||| || ||||||
Sbjct 18994575 ATTTGCATGCCACCTCTCAACCTAAGAACCAAGTGGAGGGTTGACTCCTTCTGAATATTG 18994634
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || | || || | | || || | |||||| |||||||| || | |||||| ||
Sbjct 18994635 TAATCAGCCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGG 18994694
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || | |||||||| || ||||| || || | || | ||| ||| || |||||
Sbjct 18994695 TCCGGCAGGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCGGAG 18994754
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || |||||||| || || || || || || || || || || |||||
Sbjct 18994755 CTTTCGACCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 18994810
Score = 91.5 bits (100), Expect = 3e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || || || || | || | |||||| |||||| || || | ||| || | | |
Sbjct 18993456 CGGAGAACAAGGTGAAGAGTCGACTCTTTCTGAATATTGTAATCCGCTAAAGTACGACCA 18993515
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | |||||||||||||| |||| ||||| || || ||| ||| ||||||||
Sbjct 18993516 TCCTCGAGCTGTTTTCCGGCAAAGATTAGCCTCTGCTGGTCCGGAACTATCCCTTCTTTG 18993575
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| |||| || ||| ||||| || ||| || || || || ||
Sbjct 18993576 TCCTGAATCTTGGCCTTTACGTTGTCAATCGTATCAGAGCTCTCGACCTCAAGTGTGATG 18993635
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || | || || ||||| || |||||
Sbjct 18993636 GTCTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 18993670
>seq3
Length=24464547
Score = 93.3 bits (102), Expect = 8e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| || || ||||| || | ||||| || |||||||| |||||||||||
Sbjct 3876997 ATCCTCGAGTTGCTTACCTGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTT 3877056
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
|||||| || |||| || | || ||| || || || || || || ||||||||
Sbjct 3877057 ATCTTGGATCTTGGCCTTGACGTTGTCAATTGTGTCTGAGCTTTCGACCTCAAGAGTTAT 3877116
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| ||||||||
Sbjct 3877117 GGTCTTTCCCGTAAGAGTCTTCACAAAGATTTGCAT 3877152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899646573006720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |