Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_021559.1
Length=179063
Score E
Sequences producing significant alignments: (Bits) Value
seq696 533 2e-146
seq2 378 8e-100
seq74 212 7e-50
>seq696
Length=154923
Score = 533 bits (590), Expect = 2e-146
Identities = 722/1001 (72%), Gaps = 4/1001 (0%)
Strand=Plus/Minus
Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294
|| ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| ||
Sbjct 1370 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1311
Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353
|||||||| | ||| | || || || | ||| ||| | |||||||| ||||||||
Sbjct 1310 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 1252
Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACA 72412
|||||| ||||| || || || | ||||| ||| | || ||| ||||| || || ||||
Sbjct 1251 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACA 1193
Query 72413 ACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCA 72472
| || || || ||||| | |||| |||| || || || || || || || || |
Sbjct 1192 ATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGA 1133
Query 72473 TCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTA 72532
|||||||||| || | | || || ||| | || ||||| |||||||| | || ||
Sbjct 1132 TCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTG 1073
Query 72533 TTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACA 72592
|| | ||||| | |||| | || || |||||| | |||||||||| | |
Sbjct 1072 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 1013
Query 72593 GACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTG 72652
| || || ||| | |||||||| || ||||| ||||| ||||| | || || ||
Sbjct 1012 GTCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 953
Query 72653 CAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 72712
| || ||| | | |||||| | |||||||| || |||||||||||||| ||||| |
Sbjct 952 CTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 893
Query 72713 TCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACC 72772
|||| ||||| |||||||| ||| | || ||||| || || |||||||| || |||||||
Sbjct 892 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 833
Query 72773 CCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACG 72832
| || || ||| ||||||||| ||| | ||||| || || || ||||| ||||| |
Sbjct 832 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATG 773
Query 72833 GTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACG 72892
|||| | || ||||| | | ||||| || || ||||| || || | || | |
Sbjct 772 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 713
Query 72893 GCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCG 72952
| || | ||||| |||||||||||||| || |||||||| |||||||| || || || |
Sbjct 712 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 653
Query 72953 GTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCG 73012
| |||| |||||||| ||||| |||||||| |||||||| ||||| |||||| | |
Sbjct 652 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 593
Query 73013 CTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCA 73072
| | | || ||||| || | ||||| || | | ||||| |||| ||||| ||||
Sbjct 592 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 533
Query 73073 ACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAA 73132
|||| || || ||||| |||||||||||||| || ||| | ||| || | |
Sbjct 532 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 473
Query 73133 CATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATG 73192
| |||| ||| || ||||| | || |||||||| |||||||||||||||||| | ||||
Sbjct 472 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 413
Query 73193 CACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACA 73233
| ||||||||||| ||||||||||| ||| |||| || ||
Sbjct 412 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 372
Score = 374 bits (414), Expect = 1e-98
Identities = 712/1049 (68%), Gaps = 21/1049 (2%)
Strand=Plus/Plus
Query 73353 AAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCG 73412
||| ||| | ||||| || | ||||| |||||| ||| || || ||||| || | |
Sbjct 32707 AAAAAGATTTATTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAG 32766
Query 73413 GATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAG 73472
| ||||||||||| || || || |||||||| || | || | || ||||||||| ||
Sbjct 32767 GTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAG 32826
Query 73473 GAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAG 73532
| || || || || || |||||||| || ||||| | || || ||| | || ||
Sbjct 32827 GTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTT 32886
Query 73533 CAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGT 73592
||||||||||| || ||||| || || |||| | || | | | ||| | | ||||
Sbjct 32887 GCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGT 32946
Query 73593 TCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTAT 73652
| || ||||| || || |||||||||||| || || |||| |||||||||||| ||||
Sbjct 32947 TACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTAT 33006
Query 73653 GGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTG 73712
|| ||||| || | || || | || | | | |||||||| ||| | | || ||||
Sbjct 33007 GGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTG 33066
Query 73713 AGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCG 73772
| |||| || |||| | || ||||| || ||| | || || || | || |
Sbjct 33067 AACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTG 33126
Query 73773 CAGTATTCACGAGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCAC 73832
| || || |||| ||||| ||||| |||| || | |||||||||| || |
Sbjct 33127 CTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGC 33186
Query 73833 CTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATA 73892
|| || ||||| || || || ||||| | || | || | || || || || |||
Sbjct 33187 CTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATT 33246
Query 73893 TAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTAT 73952
|| | || ||||||||||||||||| || || ||| |||| || | || | ||||
Sbjct 33247 GGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTAT 33306
Query 73953 GTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTG 74012
| || || |||||||| || ||| | || || || | |||||| ||
Sbjct 33307 GCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGA---------------TG 33351
Query 74013 AAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTT 74072
| | | | ||| |||| ||| | || || | || || || | ||||| ||||
Sbjct 33352 --GTGATGGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 33405
Query 74073 ATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACA 74132
|| ||| | || |||||| | || |||||||| || ||||| | || ||||| || |
Sbjct 33406 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 33465
Query 74133 AAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTA 74192
|| | | ||||| ||| ||||||| || ||||| || | ||| | |||| ||
Sbjct 33466 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 33525
Query 74193 TAGGTATCGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAA 74252
| || | || |||||||| | ||||| | || || ||||| || || || || ||
Sbjct 33526 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 33585
Query 74253 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAG 74312
| ||||| ||||| ||||| ||||| || ||||| ||||| || |||||| | || ||||
Sbjct 33586 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 33645
Query 74313 GTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAG 74372
|||| | || |||||| | || ||||| || ||||| ||| || | ||||| || |
Sbjct 33646 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 33705
Query 74373 AAGTCTTGCCACGAGGCAACGCACTATAA 74401
| || | ||||| || ||||| || |||
Sbjct 33706 AGGTTCTACCACGTGGAAACGCTCTTTAA 33734
>seq2
Length=19320864
Score = 378 bits (418), Expect = 8e-100
Identities = 713/1049 (68%), Gaps = 21/1049 (2%)
Strand=Plus/Plus
Query 73353 AAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCG 73412
||| ||| | ||||| || | ||||| |||||| ||| || || ||||| || | |
Sbjct 9134784 AAAAAGATTTATTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAG 9134843
Query 73413 GATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAG 73472
| ||||||||||| || || || |||||||| || | || | || ||||||||| ||
Sbjct 9134844 GTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAG 9134903
Query 73473 GAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAG 73532
| || || || || || |||||||| || ||||| | || || ||| | || ||
Sbjct 9134904 GTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTT 9134963
Query 73533 CAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGT 73592
||||||||||| || ||||| || || |||| | || | | | ||| | | ||||
Sbjct 9134964 GCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGT 9135023
Query 73593 TCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTAT 73652
| || ||||| || || |||||||||||| || || |||| |||||||||||| ||||
Sbjct 9135024 TACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTAT 9135083
Query 73653 GGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTG 73712
|| ||||| || | || || | || | | | |||||||| ||| | | || ||||
Sbjct 9135084 GGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTG 9135143
Query 73713 AGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCG 73772
| |||| || |||| | || ||||| || ||| | || || || | || |
Sbjct 9135144 AACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTG 9135203
Query 73773 CAGTATTCACGAGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCAC 73832
| || || |||| ||||| ||||| |||| || | |||||||||| || |
Sbjct 9135204 CTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGC 9135263
Query 73833 CTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATA 73892
|| || ||||| || || || ||||| | || | || | || || || || |||
Sbjct 9135264 CTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATT 9135323
Query 73893 TAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTAT 73952
|| | || ||||||||||||||||| || || ||| |||| || | || | ||||
Sbjct 9135324 GGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTAT 9135383
Query 73953 GTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTG 74012
| || || |||||||| || ||| | || || || | |||||| ||
Sbjct 9135384 GCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGA---------------TG 9135428
Query 74013 AAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTT 74072
| | | | ||| |||| ||| | || || | || || || | ||||| ||||
Sbjct 9135429 --GTGATGGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 9135482
Query 74073 ATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACA 74132
|| ||| | || |||||||| || |||||||| || ||||| | || ||||| || |
Sbjct 9135483 ATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 9135542
Query 74133 AAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTA 74192
|| | | ||||| ||| ||||||| || ||||| || | ||| | |||| ||
Sbjct 9135543 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 9135602
Query 74193 TAGGTATCGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAA 74252
| || | || |||||||| | ||||| | || || ||||| || || || || ||
Sbjct 9135603 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 9135662
Query 74253 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAG 74312
| ||||| ||||| ||||| ||||| || ||||| ||||| || |||||| | || ||||
Sbjct 9135663 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 9135722
Query 74313 GTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAG 74372
|||| | || |||||| | || ||||| || ||||| ||| || | ||||| || |
Sbjct 9135723 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 9135782
Query 74373 AAGTCTTGCCACGAGGCAACGCACTATAA 74401
| || | ||||| || ||||| || |||
Sbjct 9135783 AGGTTCTACCACGTGGAAACGCTCTTTAA 9135811
Score = 374 bits (414), Expect = 1e-98
Identities = 712/1049 (68%), Gaps = 21/1049 (2%)
Strand=Plus/Minus
Query 73353 AAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCG 73412
||| ||| | ||||| || | ||||| |||||| ||| || || ||||| || | |
Sbjct 8803695 AAAAAGATTTATTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAG 8803636
Query 73413 GATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAG 73472
| ||||||||||| || || || |||||||| || | || | || ||||||||| ||
Sbjct 8803635 GTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAG 8803576
Query 73473 GAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAG 73532
| || || || || || |||||||| || ||||| | || || ||| | || ||
Sbjct 8803575 GTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTT 8803516
Query 73533 CAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGT 73592
||||||||||| || ||||| || || |||| | || | | | ||| | | ||||
Sbjct 8803515 GCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGT 8803456
Query 73593 TCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTAT 73652
| || ||||| || || |||||||||||| || || |||| |||||||||||| ||||
Sbjct 8803455 TACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTAT 8803396
Query 73653 GGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTG 73712
|| ||||| || | || || | || | | | |||||||| ||| | | || ||||
Sbjct 8803395 GGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTG 8803336
Query 73713 AGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCG 73772
| |||| || |||| | || ||||| || ||| | || || || | || |
Sbjct 8803335 AACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTG 8803276
Query 73773 CAGTATTCACGAGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCAC 73832
| || || |||| ||||| ||||| |||| || | |||||||||| || |
Sbjct 8803275 CTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGC 8803216
Query 73833 CTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATA 73892
|| || ||||| || || || ||||| | || | || | || || || || |||
Sbjct 8803215 CTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATT 8803156
Query 73893 TAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTAT 73952
|| | || ||||||||||||||||| || || ||| |||| || | || | ||||
Sbjct 8803155 GGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTAT 8803096
Query 73953 GTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTG 74012
| || || |||||||| || ||| | || || || | |||||| ||
Sbjct 8803095 GCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGA---------------TG 8803051
Query 74013 AAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTT 74072
| | | | ||| |||| ||| | || || | || || || | ||||| ||||
Sbjct 8803050 --GTGATGGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 8802997
Query 74073 ATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACA 74132
|| ||| | || |||||| | || |||||||| || ||||| | || ||||| || |
Sbjct 8802996 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 8802937
Query 74133 AAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTA 74192
|| | | ||||| ||| ||||||| || ||||| || | ||| | |||| ||
Sbjct 8802936 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 8802877
Query 74193 TAGGTATCGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAA 74252
| || | || |||||||| | ||||| | || || ||||| || || || || ||
Sbjct 8802876 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 8802817
Query 74253 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAG 74312
| ||||| ||||| ||||| ||||| || ||||| ||||| || |||||| | || ||||
Sbjct 8802816 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 8802757
Query 74313 GTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAG 74372
|||| | || |||||| | || ||||| || ||||| ||| || | ||||| || |
Sbjct 8802756 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 8802697
Query 74373 AAGTCTTGCCACGAGGCAACGCACTATAA 74401
| || | ||||| || ||||| || |||
Sbjct 8802696 AGGTTCTACCACGTGGAAACGCTCTTTAA 8802668
Score = 333 bits (368), Expect = 3e-86
Identities = 700/1049 (67%), Gaps = 41/1049 (4%)
Strand=Plus/Plus
Query 73353 AAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCG 73412
||| ||| | ||||| || | ||||| |||||| ||| || || ||||| || | |
Sbjct 12218212 AAAAAGATTTATTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAG 12218271
Query 73413 GATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAG 73472
| ||||||||||| || || || |||||||| || | || | || ||||||||| ||
Sbjct 12218272 GTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAG 12218331
Query 73473 GAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAG 73532
| || || || || || |||||||| || ||||| | || || ||| | || ||
Sbjct 12218332 GTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTT 12218391
Query 73533 CAAATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGT 73592
||||||||||| || ||||| || || |||| ||| |
Sbjct 12218392 GCAATTTTTTAACCGCTGCAGTTTCTACTCCTG--------------------CTACTCC 12218431
Query 73593 TCCTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTAT 73652
| || ||||| || || |||||||||||| || || |||| |||||||||||| ||||
Sbjct 12218432 TACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTAT 12218491
Query 73653 GGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTG 73712
|| ||||| || | || || | || | | | |||||||| ||| | | || ||||
Sbjct 12218492 GGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTG 12218551
Query 73713 AGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCG 73772
| |||| || |||| | || || || || ||| | || || || | || |
Sbjct 12218552 AACTTGCTCGATCTGTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTG 12218611
Query 73773 CAGTATTCACGAGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCAC 73832
| || || |||| ||||| ||||| |||| || | |||||||||| || |
Sbjct 12218612 CTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGC 12218671
Query 73833 CTTCATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATA 73892
|| || ||||| || || || ||||| | || | || | || || || || |||
Sbjct 12218672 CTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATT 12218731
Query 73893 TAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTAT 73952
|| | || ||||||||||||||||| || || ||| ||||||| | || | ||||
Sbjct 12218732 GGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTAT 12218791
Query 73953 GTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTG 74012
| || || |||| ||| || ||| | || || || | |||||| ||
Sbjct 12218792 GCGCTATTCATGTTGCTACTGTAGAAAATACTTTATTTGAAGA---------------TG 12218836
Query 74013 AAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTT 74072
| | | | ||| |||| ||| | || || | || || || | ||||| ||||
Sbjct 12218837 --GTGATGGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 12218890
Query 74073 ATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACA 74132
|| ||| | || |||||| | || |||||||| || ||||| | || ||||| || |
Sbjct 12218891 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 12218950
Query 74133 AAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTA 74192
|| | | ||||| ||| ||||||| || ||||| || | ||| | |||| ||
Sbjct 12218951 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 12219010
Query 74193 TAGGTATCGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAA 74252
| || | || |||||||| | ||||| | || || |||||||| || | || ||
Sbjct 12219011 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAATCT 12219070
Query 74253 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAG 74312
| ||||| ||||| ||||| ||||| || ||||| ||||| || |||||| | || ||||
Sbjct 12219071 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 12219130
Query 74313 GTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAG 74372
|||| | || |||||| | || ||||| || ||||| ||| || | ||||| || |
Sbjct 12219131 GTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 12219190
Query 74373 AAGTCTTGCCACGAGGCAACGCACTATAA 74401
| || | ||||| || ||||| || |||
Sbjct 12219191 AGGTTCTACCACGTGGAAACGCTCTTTAA 12219219
Score = 107 bits (118), Expect = 2e-18
Identities = 174/245 (71%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294
|| ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| ||
Sbjct 8835029 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8835088
Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353
|||||||| | ||| | || || || | ||| || | |||||||| ||||||||
Sbjct 8835089 ATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTGTTATCGCATTCATTGCTGCTCC 8835147
Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACA 72412
|||||| ||||| || || || | ||||| ||| | || ||| ||||| || || ||||
Sbjct 8835148 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACA 8835206
Query 72413 ACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCA 72472
| || || || ||||| | |||| |||| || || || || || || || || |
Sbjct 8835207 ATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGA 8835266
Query 72473 TCTGG 72477
|||||
Sbjct 8835267 TCTGG 8835271
>seq74
Length=21493
Score = 212 bits (234), Expect = 7e-50
Identities = 249/334 (75%), Gaps = 11/334 (3%)
Strand=Plus/Minus
Query 72901 TTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTA 72960
||||| ||||||||| |||| || |||||||| ||||||||||| || || || ||||
Sbjct 10994 TTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTG 10935
Query 72961 ATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTC 73020
||||||| || |||||||| |||||||| ||||| |||||| | || | |
Sbjct 10934 ATCTTCC-GT--------TTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGG 10884
Query 73021 CCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAACCTTAAC 73080
|| ||||| || | ||||| || | | ||||| | || ||||| |||||||| ||
Sbjct 10883 CCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAAT 10824
Query 73081 GGATTCAACTTCAACCAATCAGTTGTAGAT-GCAAACGGAAAGATTGTACCAACATGGGG 73139
|| ||||| |||||||||||||| || ||| | || || | | || | | ||||
Sbjct 10823 GGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAATA-CTTGGGC 10765
Query 73140 AGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAA 73199
||| || ||||| | | ||| |||| |||||||||||||||||| | ||||| |||||
Sbjct 10764 TGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAA 10705
Query 73200 CTTCCCACTAGACCTAGCATCTGCTGAGTCTACA 73233
|||||| ||||||||||| ||| |||| || ||
Sbjct 10704 CTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 10671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572868615999680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |