Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq696 93.3 2e-14
seq2 93.3 2e-14
>seq696
Length=154923
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 36621 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 36680
Query 50170 CTGCTCTACTCCGC 50183
||||||||| ||||
Sbjct 36681 CTGCTCTACCCCGC 36694
>seq2
Length=19320864
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 8799781 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 8799722
Query 50170 CTGCTCTACTCCGC 50183
||||||||| ||||
Sbjct 8799721 CTGCTCTACCCCGC 8799708
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 9138700 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 9138759
Query 50170 CTGCTCTACTCCGC 50183
||||||||| ||||
Sbjct 9138760 CTGCTCTACCCCGC 9138773
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 12222079 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 12222138
Query 50170 CTGCTCTACTCCGC 50183
||||||||| ||||
Sbjct 12222139 CTGCTCTACCCCGC 12222152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181601699049552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |