Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq696 590 7e-164
seq2 549 2e-151
seq74 205 1e-47
seq1 96.9 4e-15
>seq696
Length=154923
Score = 590 bits (654), Expect = 7e-164
Identities = 726/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Minus
Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110
||||| | ||| |||| ||| | |||||| | || |||| ||||| ||||| |
Sbjct 1370 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1311
Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGCTTCATTGTTGCATTCGTAGCAGCACCT 157170
||||| || || || | | |||||| | || ||| | |||||| | || || |||
Sbjct 1310 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1251
Query 157171 CCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAAC 157230
|| || ||||| || |||||||| ||||| ||| |||| ||||| | || || |||||
Sbjct 1250 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 1191
Query 157231 ATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATC 157290
|| || || ||||| || ||||| |||| || || ||| | || || ||||| |||
Sbjct 1190 ATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 1131
Query 157291 TGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTC 157350
|||||||| ||||| ||||||| ||||| |||||||||||||||| |||| | ||
Sbjct 1130 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 1071
Query 157351 TTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGT 157410
| ||||| | | || | | |||||||| ||||||||||||||| || ||||
Sbjct 1070 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1011
Query 157411 TTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCA 157470
| |||||||| || ||||| ||||| || || || || || || ||||||| |||
Sbjct 1010 CTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 951
Query 157471 GTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 157530
|| ||| | ||||||| | ||||| || ||| || |||| ||||||||| || |||
Sbjct 950 GTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 891
Query 157531 TCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCG 157590
||||||||||| |||| |||| | || |||||||| |||||||| ||||||||||| ||
Sbjct 890 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 831
Query 157591 TTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGA 157650
|| |||||| | || || ||||| |||||||| || || | || ||||||||| ||
Sbjct 830 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGT 771
Query 157651 AGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATGG 157709
| || |||| || | ||| || | ||||| || |||| || || || | ||
Sbjct 770 TCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 712
Query 157710 TTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGG 157769
||||| ||||| ||||||||||| || |||||||| || ||||| |||||||| || ||
Sbjct 711 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 652
Query 157770 TCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGC 157829
|| ||||||||||||| ||| |||||||| | | | || |||||| | ||
Sbjct 651 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 592
Query 157830 CGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 157889
|| ||||| || || || || ||||| ||||| | || | || || ||||| |||||
Sbjct 591 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 532
Query 157890 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 157949
||| || |||||||| |||||||| || | ||||| |||| || ||||| | || ||
Sbjct 531 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 472
Query 157950 CTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 158009
||||| ||| | | ||||| ||| ||||||||||||||||||||||| ||||| ||
Sbjct 471 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 412
Query 158010 ACACAACTTCCCACTGGATCTTGCTGCTG 158038
||||||||||| || || || |||||||
Sbjct 411 TCACAACTTCCCTCTAGACCTAGCTGCTG 383
Score = 549 bits (608), Expect = 2e-151
Identities = 730/1011 (72%), Gaps = 2/1011 (0%)
Strand=Plus/Plus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | ||| | || |||||| | || || || || ||
Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTT 158954
| || |||||||| |||||| | || | ||||||| | || ||| || ||| |
Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897
Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014
|| || |||||||| ||||| ||| || | | | |||||| | || | || ||||||
Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32957
Query 159015 CCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 159074
||||| || ||||| ||||| | ||| ||| | || || || ||| ||||||
Sbjct 32958 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 33017
Query 159075 GCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 159133
|| |||||||| || || || |||| ||||| ||| | || || |||||||| || ||
Sbjct 33018 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 33077
Query 159134 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159193
||| || | | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 33078 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 33136
Query 159194 CAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 159253
|||||||| || || ||||| ||||| || ||||||| || || || |||||
Sbjct 33137 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 33196
Query 159254 GGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAA 159313
|| || || ||||| | ||| | ||||| | |||||||| || ||||||||| | ||
Sbjct 33197 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 33256
Query 159314 CCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCA 159373
||| || |||||||||||||| || ||| | || || | || || |||| ||||||||
Sbjct 33257 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 33316
Query 159374 TGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 159433
||| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 33317 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 33376
Query 159434 GTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 159493
||| | ||||||||| || || |||||||| |||||||| || |||||||| |||||
Sbjct 33377 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 33436
Query 159494 GCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGT 159553
|| ||||| || |||| ||||| || || || ||| | |||||||||||||| |||||
Sbjct 33437 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 33496
Query 159554 GCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCG 159613
|| || | ||| |||||| | |||| | | ||||| ||| | || || ||
Sbjct 33497 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 33556
Query 159614 TGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTT 159673
||| || || ||||| || || ||| | ||||| ||||||||||||||||| || ||
Sbjct 33557 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 33616
Query 159674 CTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 159733
||| || || || |||||| | || ||||| | ||||||||| |||| || |||||
Sbjct 33617 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 33676
Query 159734 ACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
|| ||||||||| | || ||||| || || ||||||||| | || |||||
Sbjct 33677 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 33727
>seq2
Length=19320864
Score = 549 bits (608), Expect = 2e-151
Identities = 730/1011 (72%), Gaps = 2/1011 (0%)
Strand=Plus/Minus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | ||| | || |||||| | || || || || ||
Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTT 158954
| || |||||||| |||||| | || | ||||||| | || ||| || ||| |
Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505
Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014
|| || |||||||| ||||| ||| || | | | |||||| | || | || ||||||
Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 8803445
Query 159015 CCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 159074
||||| || ||||| ||||| | ||| ||| | || || || ||| ||||||
Sbjct 8803444 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 8803385
Query 159075 GCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 159133
|| |||||||| || || || |||| ||||| ||| | || || |||||||| || ||
Sbjct 8803384 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 8803325
Query 159134 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159193
||| || | | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 8803324 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 8803266
Query 159194 CAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 159253
|||||||| || || ||||| ||||| || ||||||| || || || |||||
Sbjct 8803265 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 8803206
Query 159254 GGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAA 159313
|| || || ||||| | ||| | ||||| | |||||||| || ||||||||| | ||
Sbjct 8803205 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 8803146
Query 159314 CCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCA 159373
||| || |||||||||||||| || ||| | || || | || || |||| ||||||||
Sbjct 8803145 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 8803086
Query 159374 TGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 159433
||| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 8803085 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 8803026
Query 159434 GTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 159493
||| | ||||||||| || || |||||||| |||||||| || |||||||| |||||
Sbjct 8803025 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 8802966
Query 159494 GCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGT 159553
|| ||||| || |||| ||||| || || || ||| | |||||||||||||| |||||
Sbjct 8802965 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8802906
Query 159554 GCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCG 159613
|| || | ||| |||||| | |||| | | ||||| ||| | || || ||
Sbjct 8802905 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 8802846
Query 159614 TGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTT 159673
||| || || ||||| || || ||| | ||||| ||||||||||||||||| || ||
Sbjct 8802845 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 8802786
Query 159674 CTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 159733
||| || || || |||||| | || ||||| | ||||||||| |||| || |||||
Sbjct 8802785 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8802726
Query 159734 ACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
|| ||||||||| | || ||||| || || ||||||||| | || |||||
Sbjct 8802725 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 8802675
Score = 545 bits (604), Expect = 3e-150
Identities = 729/1011 (72%), Gaps = 2/1011 (0%)
Strand=Plus/Plus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | ||| | || |||||| | || || || || ||
Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTT 158954
| || |||||||| |||||| | || | ||||||| | || ||| || ||| |
Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974
Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014
|| || |||||||| ||||| ||| || | | | |||||| | || | || ||||||
Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 9135034
Query 159015 CCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 159074
||||| || ||||| ||||| | ||| ||| | || || || ||| ||||||
Sbjct 9135035 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 9135094
Query 159075 GCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 159133
|| |||||||| || || || |||| ||||| ||| | || || |||||||| || ||
Sbjct 9135095 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 9135154
Query 159134 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159193
||| || | | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 9135155 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 9135213
Query 159194 CAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 159253
|||||||| || || ||||| ||||| || ||||||| || || || |||||
Sbjct 9135214 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 9135273
Query 159254 GGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAA 159313
|| || || ||||| | ||| | ||||| | |||||||| || ||||||||| | ||
Sbjct 9135274 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 9135333
Query 159314 CCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCA 159373
||| || |||||||||||||| || ||| | || || | || || |||| ||||||||
Sbjct 9135334 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 9135393
Query 159374 TGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 159433
||| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 9135394 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 9135453
Query 159434 GTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 159493
||| | ||||||||| || || |||||||| |||||||| || ||| |||| |||||
Sbjct 9135454 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTC 9135513
Query 159494 GCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGT 159553
|| ||||| || |||| ||||| || || || ||| | |||||||||||||| |||||
Sbjct 9135514 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 9135573
Query 159554 GCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCG 159613
|| || | ||| |||||| | |||| | | ||||| ||| | || || ||
Sbjct 9135574 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 9135633
Query 159614 TGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTT 159673
||| || || ||||| || || ||| | ||||| ||||||||||||||||| || ||
Sbjct 9135634 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 9135693
Query 159674 CTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 159733
||| || || || |||||| | || ||||| | ||||||||| |||| || |||||
Sbjct 9135694 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 9135753
Query 159734 ACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
|| ||||||||| | || ||||| || || ||||||||| | || |||||
Sbjct 9135754 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 9135804
Score = 500 bits (554), Expect = 9e-137
Identities = 717/1011 (71%), Gaps = 22/1011 (2%)
Strand=Plus/Plus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | ||| | || |||||| | || || || || ||
Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTT 158954
| || |||||||| |||||| | || | ||||||| | || ||| || ||| |
Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402
Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014
|| || |||||||| ||||| ||||| || || || ||||||
Sbjct 12218403 ACCGCTGCAGTTTCTACTCC------TGCTA--------------CTCCTACTGTGGGGT 12218442
Query 159015 CCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 159074
||||| || ||||| ||||| | ||| ||| | || || || ||| ||||||
Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502
Query 159075 GCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 159133
|| |||||||| || || || |||| ||||| ||| | || || |||||||| || ||
Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562
Query 159134 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159193
||| || | | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 12218563 TCTGTTCAAT-TGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 12218621
Query 159194 CAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 159253
|||||||| || || ||||| ||||| || ||||||| || || || |||||
Sbjct 12218622 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 12218681
Query 159254 GGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAA 159313
|| || || ||||| | ||| | ||||| | |||||||| || ||||||||| | ||
Sbjct 12218682 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 12218741
Query 159314 CCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCA 159373
||| || |||||||||||||| || ||| | || || | || || |||| ||||||||
Sbjct 12218742 CCCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCA 12218801
Query 159374 TGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 159433
|| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 12218802 TGTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 12218861
Query 159434 GTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 159493
||| | ||||||||| || || |||||||| |||||||| || |||||||| |||||
Sbjct 12218862 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 12218921
Query 159494 GCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGT 159553
|| ||||| || |||| ||||| || || || ||| | |||||||||||||| |||||
Sbjct 12218922 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 12218981
Query 159554 GCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCG 159613
|| || | ||| |||||| | |||| | | ||||| ||| | || || ||
Sbjct 12218982 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 12219041
Query 159614 TGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTT 159673
||| || || || || | || ||| | ||||| ||||||||||||||||| || ||
Sbjct 12219042 TGCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTT 12219101
Query 159674 CTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 159733
||| || || || |||||| | || ||||| | ||||||||| || | || |||||
Sbjct 12219102 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCA 12219161
Query 159734 ACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
|| ||||||||| | || ||||| || || ||||||||| | || |||||
Sbjct 12219162 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 12219212
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 158205 AGTGTGAAGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACT 158264
||||||| || || ||| |||| ||||| || || ||||| ||| | ||| | |
Sbjct 2824595 AGTGTGACGACGACGTTTACGTTCTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCAT 2824536
Query 158265 ACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTG 158324
||||||| ||||||||| |||| || ||||| |||||| |||| |||||| ||||||
Sbjct 2824535 ACTCTTGCCGTGCTGGTTCTTGTTCAAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTG 2824476
Query 158325 ATCAGAGTGATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGT 158384
||||| ||| ||| ||||| || ||||| || || | ||| |||||||| || |
Sbjct 2824475 ATCAGTCTGACCAGAGTTTCCTTGATGATGAGCAGATTGGTCAAGGGTTTGTTCTCACTT 2824416
Query 158385 GTGTAGCATATCCAACATCTGAT 158407
||| || ||||| || ||||||
Sbjct 2824415 GTGCTGCTTATCCTACTTCTGAT 2824393
>seq74
Length=21493
Score = 205 bits (226), Expect = 1e-47
Identities = 243/331 (73%), Gaps = 9/331 (3%)
Strand=Plus/Minus
Query 157708 GGTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTC 157767
||||||| ||||||||||||||| | || |||||||| || ||||| || ||||| ||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 157768 GGTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTC 157827
|| || ||||||||| | ||||||| | | | || |||||| |
Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 157828 GCCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTC 157887
|| || ||||| || || || || ||||| ||||| | || | ||||| ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 157888 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 157947
||||| || |||||||| |||||||| || | ||||| |||| || ||||| | ||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 157948 ACCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 158007
|| ||||| ||| | | ||||| || |||||||||||||||||||||| |||||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 158008 GCACACAACTTCCCACTGGATCTTGCTGCTG 158038
|| ||||||||||| || || || |||||||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTG 10682
>seq1
Length=33132539
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 158180 ACTCCTGAGGGAGAAACAGTTATCCAGTGTGAAGAGGATCAATACATTCTAGACGCAGCA 158239
|| |||||||||||| || | |||| ||||| ||| | | | || ||||| ||
Sbjct 4367137 ACACCTGAGGGAGAACAAGAAGTGGAGTGCGAAGAAGATGTCTTCGTCCTCGACGCTGCT 4367196
Query 158240 GAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGCA 158299
|| ||||| ||| |||| | ||||| || ||||| ||| ||||||| || ||
Sbjct 4367197 GAGGAAGCCGGAATTGACTTGCCGTACTCATGCCGTGCCGGTTCTTGCTCAAGTTGCGCC 4367256
Query 158300 GGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCGTTCCTAGACGATGATCAA 158359
|| ||| | || ||||| || |||| ||| || ||| ||| |||||||||| ||
Sbjct 4367257 GGGAAAGTCGTCTCTGGCTCTATTGACCAGTCGGACCAGAGCTTCTTAGACGATGAACAG 4367316
Query 158360 ATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACATCTGAT 158407
||| | ||| | ||| | || ||||| || ||||| || ||||||
Sbjct 4367317 ATCAGCGAAGGCTATGTCTTGACCTGTGTGGCTTATCCGACTTCTGAT 4367364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545268856119680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |