Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq696 563 1e-155
seq2 563 1e-155
>seq696
Length=154923
Score = 563 bits (624), Expect = 1e-155
Identities = 729/1004 (73%), Gaps = 2/1004 (0%)
Strand=Plus/Plus
Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008
||||||||||| | |||| ||||| || ||||| ||||||||||| || | ||
Sbjct 32728 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 32787
Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068
|||| ||| ||| | || | || |||||| | || || ||| | ||||| || |
Sbjct 32788 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 32847
Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128
|||| || ||||| | || ||||||||| | |||||| || ||| | || || || |
Sbjct 32848 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 32907
Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188
| || || |||||| || | | | |||||| | | |||| ||||||||||| | |
Sbjct 32908 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 32967
Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248
| || |||| || ||||| ||| | || || |||||| ||| || ||||||||||
Sbjct 32968 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 33027
Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307
| || ||||| |||| || || ||| | ||||| |||||||| || || ||| || |
Sbjct 33028 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 33087
Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367
| || ||||| ||||| || || || ||||||| ||||| || || ||| ||| ||
Sbjct 33088 -TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 33146
Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427
|| || || ||||| || ||||| |||||||||||||||| |||||||| |||||
Sbjct 33147 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 33206
Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487
|| ||| ||||| | || || || ||||| || || || |||||| | ||||| |||||
Sbjct 33207 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 33266
Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547
||||||||||| || ||| | ||||| | |||||||| | ||||||||||| | |||
Sbjct 33267 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 33326
Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607
||||| ||||| || | ||||||||| || ||||| ||||| || || || |
Sbjct 33327 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 33386
Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667
|| |||| || || || ||||| ||||| || || ||||| |||||||| || |||||
Sbjct 33387 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 33446
Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727
|||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || |
Sbjct 33447 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 33506
Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787
||| | ||| | | || |||| | | || |||||| | || || ||||| |||||
Sbjct 33507 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 33566
Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847
|| || || || ||| | ||||| |||||||| || || ||||| |||||||| ||
Sbjct 33567 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 33626
Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907
|| |||||| | || ||||| | ||||||||| |||| || ||||| || ||||||
Sbjct 33627 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 33686
Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
||| | || ||||| || || || ||||| |||| ||||| ||
Sbjct 33687 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 33730
Score = 536 bits (594), Expect = 1e-147
Identities = 702/968 (73%), Gaps = 3/968 (0%)
Strand=Plus/Minus
Query 177585 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 177644
||||| || || | || ||||| || || ||||||| || || | ||| | ||||||
Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284
Query 177645 ATCTGCTTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGAA 177704
| || || |||| ||| | |||||||| || || || || || || || ||||||
Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224
Query 177705 CCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCT 177764
|| || |||| || || | || || ||||| || || || ||||| || | || ||
Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164
Query 177765 TCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGG 177824
|| || |||||| | || || || || ||||||||||| ||||| ||||||| |||
Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104
Query 177825 CTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCA 177884
|| || ||||||||||||| |||| | || | ||||| | | || | |
Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044
Query 177885 TATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTT 177944
|||||||| ||||||||||||||| | |||||| |||||||| || ||||| |||
Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984
Query 177945 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCA 178003
||||| || || ||||||||||| || | || || ||||| | ||||||| | |||||
Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTTGATCTATCCAATTGGTCA 925
Query 178004 AGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 178063
|| || || |||| ||||||||| || |||||||||||||| |||| ||| ||||
Sbjct 924 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 865
Query 178064 ATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGT 178123
|||||| || || ||||| || ||||||||||| || |||||| | ||||| ||||| ||
Sbjct 864 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 805
Query 178124 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCG 178183
|||||| || || ||||| |||||||||||| | || |||||| | || |
Sbjct 804 ATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 745
Query 178184 TGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAAC 178243
|| || ||||||| ||| || || | ||||||| ||||| ||||||||||||||
Sbjct 744 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAAC 685
Query 178244 ATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTT 178303
|| ||||| || || || || ||||| || || || ||||||||||||||||| ||
Sbjct 684 TTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 625
Query 178304 CAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 178363
|||||| || ||||| | || |||||| | || || ||||| ||||| || || |||||
Sbjct 624 CAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTT 565
Query 178364 CACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 178423
|| || | ||| | || ||||| || ||||| ||||| ||||| |||||||| ||
Sbjct 564 TACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 505
Query 178424 CATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGG 178483
| | || | ||||||||||| | || || ||||| || | | ||||||||
Sbjct 504 AGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 445
Query 178484 TCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGCAG 178543
|| || |||||||| ||||| ||| | ||| || || |||||||| || || || || |
Sbjct 444 CCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCACAACTTCCCTCTAGACCTAGCTG 386
Query 178544 CAGCTGAG 178551
| | ||||
Sbjct 385 CTGTTGAG 378
>seq2
Length=19320864
Score = 563 bits (624), Expect = 1e-155
Identities = 729/1004 (73%), Gaps = 2/1004 (0%)
Strand=Plus/Minus
Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008
||||||||||| | |||| ||||| || ||||| ||||||||||| || | ||
Sbjct 8803674 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 8803615
Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068
|||| ||| ||| | || | || |||||| | || || ||| | ||||| || |
Sbjct 8803614 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 8803555
Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128
|||| || ||||| | || ||||||||| | |||||| || ||| | || || || |
Sbjct 8803554 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 8803495
Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188
| || || |||||| || | | | |||||| | | |||| ||||||||||| | |
Sbjct 8803494 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 8803435
Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248
| || |||| || ||||| ||| | || || |||||| ||| || ||||||||||
Sbjct 8803434 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 8803375
Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307
| || ||||| |||| || || ||| | ||||| |||||||| || || ||| || |
Sbjct 8803374 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 8803315
Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367
| || ||||| ||||| || || || ||||||| ||||| || || ||| ||| ||
Sbjct 8803314 -TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 8803256
Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427
|| || || ||||| || ||||| |||||||||||||||| |||||||| |||||
Sbjct 8803255 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 8803196
Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487
|| ||| ||||| | || || || ||||| || || || |||||| | ||||| |||||
Sbjct 8803195 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 8803136
Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547
||||||||||| || ||| | ||||| | |||||||| | ||||||||||| | |||
Sbjct 8803135 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 8803076
Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607
||||| ||||| || | ||||||||| || ||||| ||||| || || || |
Sbjct 8803075 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 8803016
Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667
|| |||| || || || ||||| ||||| || || ||||| |||||||| || |||||
Sbjct 8803015 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 8802956
Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727
|||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || |
Sbjct 8802955 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 8802896
Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787
||| | ||| | | || |||| | | || |||||| | || || ||||| |||||
Sbjct 8802895 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 8802836
Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847
|| || || || ||| | ||||| |||||||| || || ||||| |||||||| ||
Sbjct 8802835 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 8802776
Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907
|| |||||| | || ||||| | ||||||||| |||| || ||||| || ||||||
Sbjct 8802775 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 8802716
Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
||| | || ||||| || || || ||||| |||| ||||| ||
Sbjct 8802715 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 8802672
Score = 560 bits (620), Expect = 1e-154
Identities = 728/1004 (73%), Gaps = 2/1004 (0%)
Strand=Plus/Plus
Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008
||||||||||| | |||| ||||| || ||||| ||||||||||| || | ||
Sbjct 9134805 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 9134864
Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068
|||| ||| ||| | || | || |||||| | || || ||| | ||||| || |
Sbjct 9134865 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 9134924
Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128
|||| || ||||| | || ||||||||| | |||||| || ||| | || || || |
Sbjct 9134925 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 9134984
Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188
| || || |||||| || | | | |||||| | | |||| ||||||||||| | |
Sbjct 9134985 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 9135044
Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248
| || |||| || ||||| ||| | || || |||||| ||| || ||||||||||
Sbjct 9135045 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 9135104
Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307
| || ||||| |||| || || ||| | ||||| |||||||| || || ||| || |
Sbjct 9135105 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 9135164
Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367
| || ||||| ||||| || || || ||||||| ||||| || || ||| ||| ||
Sbjct 9135165 -TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 9135223
Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427
|| || || ||||| || ||||| |||||||||||||||| |||||||| |||||
Sbjct 9135224 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 9135283
Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487
|| ||| ||||| | || || || ||||| || || || |||||| | ||||| |||||
Sbjct 9135284 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 9135343
Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547
||||||||||| || ||| | ||||| | |||||||| | ||||||||||| | |||
Sbjct 9135344 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 9135403
Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607
||||| ||||| || | ||||||||| || ||||| ||||| || || || |
Sbjct 9135404 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 9135463
Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667
|| |||| || || || ||||| ||||| || || ||| | |||||||| || |||||
Sbjct 9135464 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTT 9135523
Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727
|||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || |
Sbjct 9135524 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 9135583
Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787
||| | ||| | | || |||| | | || |||||| | || || ||||| |||||
Sbjct 9135584 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 9135643
Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847
|| || || || ||| | ||||| |||||||| || || ||||| |||||||| ||
Sbjct 9135644 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 9135703
Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907
|| |||||| | || ||||| | ||||||||| |||| || ||||| || ||||||
Sbjct 9135704 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 9135763
Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
||| | || ||||| || || || ||||| |||| ||||| ||
Sbjct 9135764 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 9135807
Score = 515 bits (570), Expect = 5e-141
Identities = 715/1004 (71%), Gaps = 22/1004 (2%)
Strand=Plus/Plus
Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008
||||||||||| | |||| ||||| || ||||| ||||||||||| || | ||
Sbjct 12218233 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 12218292
Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068
|||| ||| ||| | || | || |||||| | || || ||| | ||||| || |
Sbjct 12218293 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 12218352
Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128
|||| || ||||| | || ||||||||| | |||||| || ||| | || || || |
Sbjct 12218353 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 12218412
Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188
| || || |||||| || ||||| ||||||||||| | |
Sbjct 12218413 TTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGTCCTGAAGCAC 12218452
Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248
| || |||| || ||||| ||| | || || |||||| ||| || ||||||||||
Sbjct 12218453 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 12218512
Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307
| || ||||| |||| || || ||| | ||||| |||||||| || || ||| || |
Sbjct 12218513 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 12218572
Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367
| || || || ||||| || || || ||||||| ||||| || || ||| ||| ||
Sbjct 12218573 -TGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 12218631
Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427
|| || || ||||| || ||||| |||||||||||||||| |||||||| |||||
Sbjct 12218632 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 12218691
Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487
|| ||| ||||| | || || || ||||| || || || |||||| | ||||| |||||
Sbjct 12218692 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 12218751
Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547
||||||||||| || ||| | || || | |||||||| | |||||||||| | |||
Sbjct 12218752 ATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACT 12218811
Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607
||||| ||||| || | ||||||||| || ||||| ||||| || || || |
Sbjct 12218812 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 12218871
Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667
|| |||| || || || ||||| ||||| || || ||||| |||||||| || |||||
Sbjct 12218872 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 12218931
Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727
|||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || |
Sbjct 12218932 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 12218991
Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787
||| | ||| | | || |||| | | || |||||| | || || ||||| |||||
Sbjct 12218992 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 12219051
Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847
||||| | || ||| | ||||| |||||||| || || ||||| |||||||| ||
Sbjct 12219052 TTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 12219111
Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907
|| |||||| | || ||||| | ||||||||| || | || ||||| || ||||||
Sbjct 12219112 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAA 12219171
Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
||| | || ||||| || || || ||||| |||| ||||| ||
Sbjct 12219172 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 12219215
Score = 141 bits (156), Expect = 1e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597
||| | ||||| || || || ||||| || || ||| | || ||||| || |||||||||
Sbjct 2824578 TACGTTCTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGT 2824519
Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657
| ||||| | ||||||||||||| | || ||| |||| ||||||||||||||| |
Sbjct 2824518 TCTTGTTCAAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTGATCAGTCTGACCAGAGT 2824459
Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717
|||||||||||||| || |||| ||| ||| | | ||||| | || || || ||
Sbjct 2824458 TTCCTTGATGATGAGCAGATTGGTCAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACT 2824399
Query 138718 TCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACT 138755
|| ||| || |||||||| | ||||| ||||| ||
Sbjct 2824398 TCTGATGTTACCATTGAAACCCACAAAGAAGACGACCT 2824361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605661930695360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |