Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq696 628 3e-175
seq2 628 3e-175
seq74 215 6e-51
>seq696
Length=154923
Score = 628 bits (696), Expect = 3e-175
Identities = 753/1017 (74%), Gaps = 8/1017 (1%)
Strand=Plus/Plus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | || | || |||||| | || || || || |||
Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558
| || ||||| || || || | || |||||||| | |||||| |||||| |
Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897
Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32957
Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678
||||| | ||||| || || || ||||| ||| | || || | ||| | ||||||
Sbjct 32958 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 33017
Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737
||||||||||| || ||||| | |||||||||||| |||| ||||||||| |||||||
Sbjct 33018 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 33077
Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797
||| ||| | || ||||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 33078 TCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 33136
Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857
|| ||||| || |||||||| ||||| ||| ||||||||||| |||||||| ||
Sbjct 33137 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 33196
Query 159858 GGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914
||||| || || ||| ||| |||| || |||| ||||||| || || ||||| |
Sbjct 33197 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATT 33253
Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974
||||| || |||||||||||||| || ||| |||| || | || ||| | || || ||
Sbjct 33254 GAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTAT 33313
Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034
||||||||||||||||| || || || ||||||||||| || ||||| |||||
Sbjct 33314 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 33373
Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094
|| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| ||
Sbjct 33374 TGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 33433
Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154
||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||
Sbjct 33434 GTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 33493
Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214
||| || || | ||| |||||| || |||| | | ||||| ||||| |||||
Sbjct 33494 TGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCT 33553
Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274
||||| || || ||||| ||||| || | ||||| |||||||| |||||||||||
Sbjct 33554 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGAC 33613
Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334
||||| || || || || || || || ||||| |||||||||||||||| || ||
Sbjct 33614 TTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 33673
Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 33674 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 33730
Score = 596 bits (660), Expect = 2e-165
Identities = 736/1004 (73%), Gaps = 2/1004 (0%)
Strand=Plus/Minus
Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734
|||||| | ||| ||||| || | |||||| | || |||| ||||| ||||| |
Sbjct 1371 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1312
Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGTTTCATCGTCGCCTTCGTCGCTGCTCC 157794
|||||| ||||| || | | |||||| | ||| || |||| ||| | ||||||||
Sbjct 1311 GATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 1252
Query 157795 CCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAA 157854
|| || || ||||| || || || ||||| ||| |||| || || | || || |||||
Sbjct 1251 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 1192
Query 157855 CATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCAT 157914
|| || || ||||| || |||||| ||| || || ||| | || || ||||| ||
Sbjct 1191 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 1132
Query 157915 CTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGT 157974
||||||||| ||||| |||| || ||||| || ||||||||||||| |||| | ||
Sbjct 1131 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 1072
Query 157975 ATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCG 158034
| ||||| | | || | | |||||||| |||||||||||||| || |||
Sbjct 1071 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1012
Query 158035 TTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGC 158094
| | |||||||| || ||||| || |||||||| ||||| || || || |||| |||
Sbjct 1011 TCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 952
Query 158095 AGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158154
|| ||| | ||||||| | ||||| || ||| || |||| ||||||||| || ||
Sbjct 951 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 892
Query 158155 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158214
|||||||||||| |||| ||| |||||||||| || || |||||||| |||||||||||
Sbjct 891 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 832
Query 158215 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158274
|| || ||| | ||||| ||||| |||||||| || || ||||| ||||||||||||
Sbjct 831 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 772
Query 158275 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 158333
| || ||||| | | | || | ||||| || |||| || || || | |
Sbjct 771 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 713
Query 158334 GTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCG 158393
|||| | ||||| ||||||||||| || |||||||| || || || || || || || |
Sbjct 712 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 653
Query 158394 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158453
| || |||||||||||||| ||| |||||||| || ||||| || || |||||| | |
Sbjct 652 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 593
Query 158454 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 158513
| || ||||| || || || || ||||| || || | || | || ||||| ||||
Sbjct 592 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 533
Query 158514 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158573
|||| || |||||||| |||||||| || | ||||| |||| || ||||| | || |
Sbjct 532 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 473
Query 158574 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158633
| ||||| ||| | | ||||| ||| ||||||||||||||||||||||| ||||| |
Sbjct 472 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 413
Query 158634 CACACAACTTCCCACTGGATCTTGCTGCTGCTGAGTCTACACCT 158677
| ||||||||||| || || || ||||||| |||| || || ||
Sbjct 412 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCATCT 369
>seq2
Length=19320864
Score = 628 bits (696), Expect = 3e-175
Identities = 753/1017 (74%), Gaps = 8/1017 (1%)
Strand=Plus/Minus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | || | || |||||| | || || || || |||
Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558
| || ||||| || || || | || |||||||| | |||||| |||||| |
Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505
Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 8803445
Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678
||||| | ||||| || || || ||||| ||| | || || | ||| | ||||||
Sbjct 8803444 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 8803385
Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737
||||||||||| || ||||| | |||||||||||| |||| ||||||||| |||||||
Sbjct 8803384 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 8803325
Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797
||| ||| | || ||||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 8803324 TCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 8803266
Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857
|| ||||| || |||||||| ||||| ||| ||||||||||| |||||||| ||
Sbjct 8803265 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 8803206
Query 159858 GGTAGCAGCAATCTTTAGATTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914
||||| || || ||| ||||| || || |||| |||||||| | || ||||| |
Sbjct 8803205 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAATTGGACATT 8803149
Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974
||||| || |||||||||||||| || ||| |||| || | || ||| | || || ||
Sbjct 8803148 GAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTAT 8803089
Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034
||||||||||||||||| || || || ||||||||||| || ||||| |||||
Sbjct 8803088 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 8803029
Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094
|| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| ||
Sbjct 8803028 TGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 8802969
Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154
||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||
Sbjct 8802968 GTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 8802909
Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214
||| || || | ||| |||||| || |||| | | ||||| ||||| |||||
Sbjct 8802908 TGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCT 8802849
Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274
||||| || || ||||| ||||| || | ||||| |||||||| |||||||||||
Sbjct 8802848 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGAC 8802789
Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334
||||| || || || || || || || ||||| |||||||||||||||| || ||
Sbjct 8802788 TTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 8802729
Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 8802728 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 8802672
Score = 625 bits (692), Expect = 3e-174
Identities = 752/1017 (74%), Gaps = 8/1017 (1%)
Strand=Plus/Plus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | || | || |||||| | || || || || |||
Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558
| || ||||| || || || | || |||||||| | |||||| |||||| |
Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974
Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 9135034
Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678
||||| | ||||| || || || ||||| ||| | || || | ||| | ||||||
Sbjct 9135035 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 9135094
Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737
||||||||||| || ||||| | |||||||||||| |||| ||||||||| |||||||
Sbjct 9135095 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 9135154
Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797
||| ||| | || ||||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 9135155 TCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 9135213
Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857
|| ||||| || |||||||| ||||| ||| ||||||||||| |||||||| ||
Sbjct 9135214 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 9135273
Query 159858 GGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914
||||| || || ||| ||| |||| || |||| ||||||| || || ||||| |
Sbjct 9135274 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATT 9135330
Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974
||||| || |||||||||||||| || ||| |||| || | || ||| | || || ||
Sbjct 9135331 GAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTAT 9135390
Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034
||||||||||||||||| || || || ||||||||||| || ||||| |||||
Sbjct 9135391 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 9135450
Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094
|| ||| | || ||||||| ||||| |||||||| |||||||| || ||| |||| ||
Sbjct 9135451 TGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTG 9135510
Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154
||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||
Sbjct 9135511 GTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 9135570
Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214
||| || || | ||| |||||| || |||| | | ||||| ||||| |||||
Sbjct 9135571 TGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCT 9135630
Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274
||||| || || ||||| ||||| || | ||||| |||||||| |||||||||||
Sbjct 9135631 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGAC 9135690
Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334
||||| || || || || || || || ||||| |||||||||||||||| || ||
Sbjct 9135691 TTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 9135750
Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 9135751 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 9135807
Score = 574 bits (636), Expect = 5e-159
Identities = 738/1017 (73%), Gaps = 28/1017 (3%)
Strand=Plus/Plus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | || | || |||||| | || || || || |||
Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558
| || ||||| || || || | || |||||||| | |||||| |||||| |
Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402
Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618
|| || || || || || |||||| || ||||| ||||||
Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGT 12218442
Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678
||||| | ||||| || || || ||||| ||| | || || | ||| | ||||||
Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502
Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737
||||||||||| || ||||| | |||||||||||| |||| ||||||||| |||||||
Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562
Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797
||| ||| | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 12218563 TCT-GTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 12218621
Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857
|| ||||| || |||||||| ||||| ||| ||||||||||| |||||||| ||
Sbjct 12218622 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 12218681
Query 159858 GGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914
||||| || || ||| ||| |||| || |||| ||||||| || || ||||| |
Sbjct 12218682 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATT 12218738
Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974
||||| || |||||||||||||| || ||| |||| || | || ||| | || || ||
Sbjct 12218739 GAACCCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTAT 12218798
Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034
|||| |||||||||||| || || || ||||||||||| || ||||| |||||
Sbjct 12218799 TCATGTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 12218858
Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094
|| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| ||
Sbjct 12218859 TGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 12218918
Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154
||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||
Sbjct 12218919 GTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 12218978
Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214
||| || || | ||| |||||| || |||| | | ||||| ||||| |||||
Sbjct 12218979 TGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCT 12219038
Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274
||||| || || || || |||| || | ||||| |||||||| |||||||||||
Sbjct 12219039 ACGTGCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGAC 12219098
Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334
||||| || || || || || || || ||||| |||||||||||||| | || ||
Sbjct 12219099 TTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGA 12219158
Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 12219159 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 12219215
Score = 104 bits (114), Expect = 3e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 158808 GACGGCGATCAAGTTATTCAGTGTGAGTCCGATCAGTACATTCTAGACGCTGCAGAAGAG 158867
|| || || |||| || ||||||| ||| ||| |||| ||||| || || ||
Sbjct 2824614 GAAGGTGAGCAAGAGGTTGAGTGTGACGACGACGTTTACGTTCTTGACGCGGCCGAGGAA 2824555
Query 158868 GCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGTGCCTGTTCTTCCTGTGCTGGTAAA 158927
|| ||| | ||| | || || || ||||||||| | ||||| |||||||||||||
Sbjct 2824554 GCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGTTCTTGTTCAAGCTGTGCTGGTAAA 2824495
Query 158928 CTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCATTCTTGGATGATGATCAGATTGCA 158987
|||| ||| ||||||| || || ||| ||| | |||||||| |||||||
Sbjct 2824494 GTTGTGTCTGGATCTGTTGATCAGTCTGACCAGAGTTTCCTTGATGATGAGCAGATTGGT 2824435
Query 158988 GAAGGATTTATCCTTACGTGTGTATCTTATCCCACTTCTGAT 159029
|||| ||| | || || |||| ||||||| |||||||||
Sbjct 2824434 CAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACTTCTGAT 2824393
>seq74
Length=21493
Score = 215 bits (238), Expect = 6e-51
Identities = 254/345 (74%), Gaps = 9/345 (3%)
Strand=Plus/Minus
Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392
||||| | ||||||||||||||| | || |||||||| || || || ||||| || ||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452
|| || |||||||||| | ||||||| || ||||| || || |||||| |
Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTC 158512
|| || ||||| || || || || ||||| || || | || | || ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 158513 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 158572
||||| || |||||||| |||||||| || | ||||| |||| || ||||| | ||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 158573 ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 158632
|| ||||| ||| | | ||||| || |||||||||||||||||||||| |||||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 158633 GCACACAACTTCCCACTGGATCTTGCTGCTGCTGAGTCTACACCT 158677
|| ||||||||||| || || || ||||||| |||| || || ||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCATCT 10668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 573019014691200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |