Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq696 569 2e-157
seq2 509 2e-139
seq74 244 1e-59
>seq696
Length=154923
Score = 569 bits (630), Expect = 2e-157
Identities = 708/967 (73%), Gaps = 2/967 (0%)
Strand=Plus/Minus
Query 159987 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 160046
||||| || || | || ||||| || || ||||||| || || | ||| | |||||
Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284
Query 160047 ATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAA 160106
| ||| || |||| ||| | |||||||| || || || || || || || ||||||
Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224
Query 160107 CCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCT 160166
|| || |||| || || | || || ||||| || || || ||||| || |||| ||
Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164
Query 160167 TCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGG 160226
|| || |||||| | || || || || ||||||||||| ||||| ||||||| |||
Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104
Query 160227 CTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGCA 160286
|| || ||||||||||||| |||| | || | ||||| | | || | |
Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044
Query 160287 TATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTA 160346
|||||||| ||||||||||||||| | |||| | |||||||| || ||||| ||
Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984
Query 160347 GCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAA 160406
|||||||| ||||| || || || || ||||||| ||| | | ||||| | |||||
Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAG 924
Query 160407 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 160466
|| ||| || |||| ||||||||| || |||||||||||||| |||| ||| |||||
Sbjct 923 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 864
Query 160467 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTA 160526
||||| || || ||||| || |||||||| || || |||||| | || || ||||| |||
Sbjct 863 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 804
Query 160527 TTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC-G 160585
||||| || || | || ||||||||| || | || ||||| | | | || |
Sbjct 803 TTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCAG 745
Query 160586 TGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGAC 160645
||||| || |||| || || || | ||||| | ||||| ||||| ||||| ||
Sbjct 744 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAAC 685
Query 160646 CTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATT 160705
|||||||| || || || || ||||| || || || ||||||||||||||||| ||
Sbjct 684 TTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 625
Query 160706 CAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTT 160765
|||||| || ||||| | || |||||| | || || ||||| ||||| || || |||||
Sbjct 624 CAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTT 565
Query 160766 CACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 160825
|||||| | ||| |||| || ||||| |||||||| || |||||||| |||||||| ||
Sbjct 564 TACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 505
Query 160826 CATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTGG 160885
| | ||| ||||||| ||||| | || || ||||| || | | || ||||||
Sbjct 504 AGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 445
Query 160886 TCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTGC 160945
||||||||||||||||||||||| ||||| || ||||||||||| || ||||| |||||
Sbjct 444 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 385
Query 160946 TGCTGAG 160952
|| ||||
Sbjct 384 TGTTGAG 378
Score = 509 bits (564), Expect = 2e-139
Identities = 726/1019 (71%), Gaps = 2/1019 (0%)
Strand=Plus/Plus
Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777
Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807
|| | || |||| ||| ||| | ||| | || |||||| | || || ||||| ||
Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837
Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 161867
| ||| |||||||| ||||| | || ||||||||| | || ||| || ||| |
Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897
Query 161868 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 161926
|| || ||||| ||||| ||| | | | | |||||| || || || || |||||
Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 32956
Query 161927 TCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 161986
|||||| || ||||| ||||| || ||| ||| | || || || ||| ||||||
Sbjct 32957 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 33016
Query 161987 GGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACG 162046
|| ||||| || || ||||| |||| || || ||| | ||||| |||||||| || ||
Sbjct 33017 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 33076
Query 162047 TCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 162106
| || | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 33077 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 33136
Query 162107 CAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 162166
|||||||| || || ||| | ||||| || ||||||| || || || |||||
Sbjct 33137 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 33196
Query 162167 GGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAA 162226
|| || || || ||| ||||| | | ||| | ||||| || ||||| ||||| ||||
Sbjct 33197 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 33256
Query 162227 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCA 162286
||| || |||||||||||||| || ||| |||| || | || || |||| ||||||||
Sbjct 33257 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 33316
Query 162287 CGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 162346
|| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 33317 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 33376
Query 162347 GTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 162406
||| | | || || | ||||| |||||||| |||||||| || |||||||| |||||
Sbjct 33377 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 33436
Query 162407 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 162466
|| ||||| || |||| ||||| || || || ||| | ||||| || ||||| |||||
Sbjct 33437 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 33496
Query 162467 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 162526
|| || | ||| |||||| || |||| | | ||||| ||| | ||||| ||
Sbjct 33497 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 33556
Query 162527 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTT 162586
||| || || ||||| ||||| ||| | ||||| |||||||| || ||||| || ||
Sbjct 33557 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 33616
Query 162587 CTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCA 162646
||| ||||| || ||||| | || ||||| | ||||| ||| | || || || ||
Sbjct 33617 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 33676
Query 162647 ACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705
|| ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||||
Sbjct 33677 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 33735
>seq2
Length=19320864
Score = 509 bits (564), Expect = 2e-139
Identities = 726/1019 (71%), Gaps = 2/1019 (0%)
Strand=Plus/Minus
Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625
Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807
|| | || |||| ||| ||| | ||| | || |||||| | || || ||||| ||
Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565
Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 161867
| ||| |||||||| ||||| | || ||||||||| | || ||| || ||| |
Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505
Query 161868 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 161926
|| || ||||| ||||| ||| | | | | |||||| || || || || |||||
Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 8803446
Query 161927 TCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 161986
|||||| || ||||| ||||| || ||| ||| | || || || ||| ||||||
Sbjct 8803445 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 8803386
Query 161987 GGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACG 162046
|| ||||| || || ||||| |||| || || ||| | ||||| |||||||| || ||
Sbjct 8803385 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 8803326
Query 162047 TCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 162106
| || | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 8803325 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 8803266
Query 162107 CAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 162166
|||||||| || || ||| | ||||| || ||||||| || || || |||||
Sbjct 8803265 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 8803206
Query 162167 GGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAA 162226
|| || || || ||| ||||| | | ||| | ||||| || ||||| ||||| ||||
Sbjct 8803205 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 8803146
Query 162227 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCA 162286
||| || |||||||||||||| || ||| |||| || | || || |||| ||||||||
Sbjct 8803145 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 8803086
Query 162287 CGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 162346
|| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 8803085 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 8803026
Query 162347 GTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 162406
||| | | || || | ||||| |||||||| |||||||| || |||||||| |||||
Sbjct 8803025 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 8802966
Query 162407 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 162466
|| ||||| || |||| ||||| || || || ||| | ||||| || ||||| |||||
Sbjct 8802965 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8802906
Query 162467 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 162526
|| || | ||| |||||| || |||| | | ||||| ||| | ||||| ||
Sbjct 8802905 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 8802846
Query 162527 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTT 162586
||| || || ||||| ||||| ||| | ||||| |||||||| || ||||| || ||
Sbjct 8802845 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 8802786
Query 162587 CTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCA 162646
||| ||||| || ||||| | || ||||| | ||||| ||| | || || || ||
Sbjct 8802785 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8802726
Query 162647 ACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705
|| ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||||
Sbjct 8802725 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 8802667
Score = 506 bits (560), Expect = 2e-138
Identities = 725/1019 (71%), Gaps = 2/1019 (0%)
Strand=Plus/Plus
Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854
Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807
|| | || |||| ||| ||| | ||| | || |||||| | || || ||||| ||
Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914
Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 161867
| ||| |||||||| ||||| | || ||||||||| | || ||| || ||| |
Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974
Query 161868 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 161926
|| || ||||| ||||| ||| | | | | |||||| || || || || |||||
Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 9135033
Query 161927 TCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 161986
|||||| || ||||| ||||| || ||| ||| | || || || ||| ||||||
Sbjct 9135034 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 9135093
Query 161987 GGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACG 162046
|| ||||| || || ||||| |||| || || ||| | ||||| |||||||| || ||
Sbjct 9135094 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 9135153
Query 162047 TCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 162106
| || | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 9135154 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 9135213
Query 162107 CAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 162166
|||||||| || || ||| | ||||| || ||||||| || || || |||||
Sbjct 9135214 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 9135273
Query 162167 GGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAA 162226
|| || || || ||| ||||| | | ||| | ||||| || ||||| ||||| ||||
Sbjct 9135274 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 9135333
Query 162227 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCA 162286
||| || |||||||||||||| || ||| |||| || | || || |||| ||||||||
Sbjct 9135334 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 9135393
Query 162287 CGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 162346
|| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 9135394 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 9135453
Query 162347 GTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 162406
||| | | || || | ||||| |||||||| |||||||| || ||| |||| |||||
Sbjct 9135454 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTC 9135513
Query 162407 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 162466
|| ||||| || |||| ||||| || || || ||| | ||||| || ||||| |||||
Sbjct 9135514 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 9135573
Query 162467 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 162526
|| || | ||| |||||| || |||| | | ||||| ||| | ||||| ||
Sbjct 9135574 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 9135633
Query 162527 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTT 162586
||| || || ||||| ||||| ||| | ||||| |||||||| || ||||| || ||
Sbjct 9135634 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 9135693
Query 162587 CTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCA 162646
||| ||||| || ||||| | || ||||| | ||||| ||| | || || || ||
Sbjct 9135694 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 9135753
Query 162647 ACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705
|| ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||||
Sbjct 9135754 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 9135812
Score = 461 bits (510), Expect = 8e-125
Identities = 710/1018 (70%), Gaps = 20/1018 (2%)
Strand=Plus/Plus
Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282
Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807
|| | || |||| ||| ||| | ||| | || |||||| | || || ||||| ||
Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342
Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 161867
| ||| |||||||| ||||| | || ||||||||| | || ||| || ||| |
Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402
Query 161868 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGT 161927
|| || ||||| ||||| ||| || || || ||||||
Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGT 12218442
Query 161928 CCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 161987
||||| || ||||| ||||| || ||| ||| | || || || ||| ||||||
Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502
Query 161988 GCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACGT 162047
|| ||||| || || ||||| |||| || || ||| | ||||| |||||||| || ||
Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562
Query 162048 CTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTC 162107
| || | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 12218563 TCTGTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 12218622
Query 162108 AGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGG 162167
|||||||| || || ||| | ||||| || ||||||| || || || |||||
Sbjct 12218623 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 12218682
Query 162168 GTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAAC 162227
|| || || || ||| ||||| | | ||| | ||||| || ||||| ||||| |||||
Sbjct 12218683 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 12218742
Query 162228 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCAC 162287
|| || |||||||||||||| || ||| |||| || | || || |||| ||||||||
Sbjct 12218743 CCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCAT 12218802
Query 162288 GGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCG 162347
| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 12218803 GTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 12218862
Query 162348 TTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCG 162407
||| | | || || | ||||| |||||||| |||||||| || |||||||| |||||
Sbjct 12218863 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 12218922
Query 162408 CAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTG 162467
|| ||||| || |||| ||||| || || || ||| | ||||| || ||||| |||||
Sbjct 12218923 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 12218982
Query 162468 CCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGT 162527
|| || | ||| |||||| || |||| | | ||||| ||| | ||||| |||
Sbjct 12218983 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 12219042
Query 162528 GCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTC 162587
|| || || || || |||| ||| | ||||| |||||||| || ||||| || |||
Sbjct 12219043 GCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 12219102
Query 162588 TACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAA 162647
|| ||||| || ||||| | || ||||| | ||||| ||| | | || || ||
Sbjct 12219103 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAG 12219162
Query 162648 CCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705
|| ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||||
Sbjct 12219163 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 12219220
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 161090 GAAGGTAACCAAGTTGTTCAATGTGAACCAGACCAGTACATTTTAGATGCAGCAGAAGAG 161149
|||||| | |||| ||| | ||||| ||| ||| || | || || || || ||
Sbjct 2824614 GAAGGTGAGCAAGAGGTTGAGTGTGACGACGACGTTTACGTTCTTGACGCGGCCGAGGAA 2824555
Query 161150 GCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGTGCAGGTAAA 161209
|| ||| | ||| | || ||||| ||||||||| |||| || |||||| ||||||
Sbjct 2824554 GCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGTTCTTGTTCAAGCTGTGCTGGTAAA 2824495
Query 161210 ATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGACCAGATTGAA 161269
|| | || || | || || |||||||||||| ||| | |||||||| |||||||
Sbjct 2824494 GTTGTGTCTGGATCTGTTGATCAGTCTGACCAGAGTTTCCTTGATGATGAGCAGATTGGT 2824435
Query 161270 TCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305
|| || || | || |||| ||| |||||||||
Sbjct 2824434 CAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACT 2824399
>seq74
Length=21493
Score = 244 bits (270), Expect = 1e-59
Identities = 255/336 (76%), Gaps = 9/336 (3%)
Strand=Plus/Minus
Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676
||||| | ||||||||||| ||| | || |||||||| || || || |||||||| ||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTG 160736
|| || |||||||||| | ||||||| || ||||| | || |||||| |
Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 160737 GCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 160796
|| || ||||| ||||| || || ||||| |||||| | ||| ||||||| ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 160797 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAAC 160856
||||| || |||||||| |||||||| || | | ||| ||||||| ||||| | ||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 160857 ACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 160916
|| ||||| || | | || ||| || |||||||||||||||||||||| |||||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 160917 GCACACAACTTCCCACTCGACCTCGCTGCTGCTGAG 160952
|| ||||||||||| || ||||| ||||||| ||||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559499132315200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |