Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq696 562 4e-155 seq2 508 7e-139 seq74 181 1e-40 >seq696 Length=154923 Score = 562 bits (622), Expect = 4e-155 Identities = 704/966 (73%), Gaps = 0/966 (0%) Strand=Plus/Minus Query 181008 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 181067 ||||| || || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284 Query 181068 ATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAA 181127 | ||| || |||| ||| | |||||||| || || || || || || || |||||| Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224 Query 181128 CCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCT 181187 || || |||| || || | || || ||||| || || || ||||| || |||| || Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164 Query 181188 TCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGG 181247 || || |||||| | || || || || ||||||||||| ||||| ||||||| ||| Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104 Query 181248 CTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGCA 181307 || || ||||||||||||| |||| | || | ||||| | | || | | Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044 Query 181308 TACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTT 181367 || ||||| ||||| |||||||| || ||| | |||||||| || ||||| ||| Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984 Query 181368 GCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAA 181427 ||||| || ||||| || ||||| || ||||||| ||| | ||||||| | ||||| Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAG 924 Query 181428 GGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTT 181487 || ||| ||||| | ||||| || || ||||||||||| ||||||| ||| |||| Sbjct 923 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 864 Query 181488 TTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTA 181547 ||||| || |||||||||||||| ||||| || || |||||||| ||||| || |||||| Sbjct 863 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 804 Query 181548 TTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 181607 || || || || || || ||||| ||||| ||||| ||||| || ||| | || | Sbjct 803 TTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGG 744 Query 181608 GAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACA 181667 || || || |||| ||| || || | ||||||| ||||| ||||||||||| || Sbjct 743 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 684 Query 181668 TACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTC 181727 |||||||| || || || |||||||| ||||| || |||||||||||||||||| ||| Sbjct 683 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 624 Query 181728 AACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTC 181787 ||||| || ||||| | || |||||| | || || ||||| ||||| || || ||||| Sbjct 623 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 564 Query 181788 ACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCT 181847 || || | || | || || ||||| || ||||| ||||| ||||| |||||||| || Sbjct 563 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 504 Query 181848 ATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGT 181907 | | || | ||||||||||| | || || ||||| || | | |||||||| Sbjct 503 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 444 Query 181908 CTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGCA 181967 || || |||||||| ||||| || || || || ||||||||||| || || || || || Sbjct 443 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 384 Query 181968 GCTGAG 181973 | |||| Sbjct 383 GTTGAG 378 Score = 508 bits (562), Expect = 7e-139 Identities = 720/1007 (71%), Gaps = 8/1007 (1%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| ||||| || ||||| ||||||||||| || | || Sbjct 32728 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 32787 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 32788 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 32847 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| || || || | || ||||||| | |||||| || ||| | || || || | Sbjct 32848 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 32907 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 32908 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 32967 Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670 | || |||| || ||||| ||| | || || || ||| ||| || |||||||||| Sbjct 32968 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 33027 Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG-CCTGATTGGA 182729 | || ||||| | || ||||| ||| | | ||||||||||||||||| ||| || | Sbjct 33028 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAA 33086 Query 182730 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTC 182789 | ||||||| ||||| || || || |||||||| |||||||| || || ||| ||| Sbjct 33087 TTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 33146 Query 182790 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 182849 || || ||||| | || || || |||||| || ||||| |||||||| ||||| Sbjct 33147 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 33206 Query 182850 ATCTTCAGGT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTC 182906 || || | | |||| || |||| ||||||| || || |||||| | ||||| || Sbjct 33207 ATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTT 33263 Query 182907 CATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTC 182966 |||||||||||||| || ||| ||||||| | || ||||| | ||||| ||||||| Sbjct 33264 CATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCT 33323 Query 182967 ACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGAT 183026 || ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 33324 ACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAAC 33383 Query 183027 TCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATC 183086 | ||||| | || || || ||||| ||||| || || || || ||||||||||||||| Sbjct 33384 CCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATC 33443 Query 183087 TTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTC 183146 || |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 33444 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTA 33503 Query 183147 ATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTAT 183206 | ||| | ||| | | || |||| | | || || ||| | || || ||||| ||| Sbjct 33504 ACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTAT 33563 Query 183207 GATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACA 183266 || || || || || || | ||||| |||||||| || || ||||| ||||| || Sbjct 33564 GACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACT 33623 Query 183267 AAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACAT 183326 || || || ||| | || ||||| | ||||||||| |||| || ||||| || ||| Sbjct 33624 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCAT 33683 Query 183327 GAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 |||||| | || |||||||| || |||||||| | || ||||| || Sbjct 33684 GAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 33730 >seq2 Length=19320864 Score = 508 bits (562), Expect = 7e-139 Identities = 720/1007 (71%), Gaps = 8/1007 (1%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| ||||| || ||||| ||||||||||| || | || Sbjct 8803674 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 8803615 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 8803614 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 8803555 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| || || || | || ||||||| | |||||| || ||| | || || || | Sbjct 8803554 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 8803495 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 8803494 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 8803435 Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670 | || |||| || ||||| ||| | || || || ||| ||| || |||||||||| Sbjct 8803434 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 8803375 Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGA 182729 | || ||||| | || ||||| ||| | | ||||||||||||||||| ||| || | Sbjct 8803374 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAA 8803316 Query 182730 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTC 182789 | ||||||| ||||| || || || |||||||| |||||||| || || ||| ||| Sbjct 8803315 TTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 8803256 Query 182790 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 182849 || || ||||| | || || || |||||| || ||||| |||||||| ||||| Sbjct 8803255 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 8803196 Query 182850 ATCTTCAGGTTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTC 182906 || || | ||| || || |||| |||||||| | || |||||| | ||||| || Sbjct 8803195 ATATTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAATTGGACATTGAACCCATTT 8803139 Query 182907 CATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTC 182966 |||||||||||||| || ||| ||||||| | || ||||| | ||||| ||||||| Sbjct 8803138 CATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCT 8803079 Query 182967 ACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGAT 183026 || ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 8803078 ACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAAC 8803019 Query 183027 TCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATC 183086 | ||||| | || || || ||||| ||||| || || || || ||||||||||||||| Sbjct 8803018 CCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATC 8802959 Query 183087 TTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTC 183146 || |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 8802958 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTA 8802899 Query 183147 ATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTAT 183206 | ||| | ||| | | || |||| | | || || ||| | || || ||||| ||| Sbjct 8802898 ACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTAT 8802839 Query 183207 GATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACA 183266 || || || || || || | ||||| |||||||| || || ||||| ||||| || Sbjct 8802838 GACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACT 8802779 Query 183267 AAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACAT 183326 || || || ||| | || ||||| | ||||||||| |||| || ||||| || ||| Sbjct 8802778 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCAT 8802719 Query 183327 GAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 |||||| | || |||||||| || |||||||| | || ||||| || Sbjct 8802718 GAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 8802672 Score = 502 bits (556), Expect = 3e-137 Identities = 719/1007 (71%), Gaps = 8/1007 (1%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| ||||| || ||||| ||||||||||| || | || Sbjct 9134805 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 9134864 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 9134865 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 9134924 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| || || || | || ||||||| | |||||| || ||| | || || || | Sbjct 9134925 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 9134984 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 9134985 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 9135044 Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670 | || |||| || ||||| ||| | || || || ||| ||| || |||||||||| Sbjct 9135045 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 9135104 Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG-CCTGATTGGA 182729 | || ||||| | || ||||| ||| | | ||||||||||||||||| ||| || | Sbjct 9135105 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAA 9135163 Query 182730 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTC 182789 | ||||||| ||||| || || || |||||||| |||||||| || || ||| ||| Sbjct 9135164 TTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 9135223 Query 182790 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 182849 || || ||||| | || || || |||||| || ||||| |||||||| ||||| Sbjct 9135224 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 9135283 Query 182850 ATCTTCAGGT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTC 182906 || || | | |||| || |||| ||||||| || || |||||| | ||||| || Sbjct 9135284 ATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTT 9135340 Query 182907 CATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTC 182966 |||||||||||||| || ||| ||||||| | || ||||| | ||||| ||||||| Sbjct 9135341 CATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCT 9135400 Query 182967 ACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGAT 183026 || ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 9135401 ACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAAC 9135460 Query 183027 TCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATC 183086 | ||||| | || || || ||||| ||||| || || || | ||||||||||||||| Sbjct 9135461 CCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATC 9135520 Query 183087 TTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTC 183146 || |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 9135521 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTA 9135580 Query 183147 ATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTAT 183206 | ||| | ||| | | || |||| | | || || ||| | || || ||||| ||| Sbjct 9135581 ACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTAT 9135640 Query 183207 GATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACA 183266 || || || || || || | ||||| |||||||| || || ||||| ||||| || Sbjct 9135641 GACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACT 9135700 Query 183267 AAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACAT 183326 || || || ||| | || ||||| | ||||||||| |||| || ||||| || ||| Sbjct 9135701 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCAT 9135760 Query 183327 GAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 |||||| | || |||||||| || |||||||| | || ||||| || Sbjct 9135761 GAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 9135807 Score = 457 bits (506), Expect = 1e-123 Identities = 706/1007 (70%), Gaps = 28/1007 (3%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| ||||| || ||||| ||||||||||| || | || Sbjct 12218233 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 12218292 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 12218293 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 12218352 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| || || || | || ||||||| | |||||| || ||| | || || || | Sbjct 12218353 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 12218412 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610 | || || |||||| || ||||| ||||||||||| | | Sbjct 12218413 TTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGTCCTGAAGCAC 12218452 Query 182611 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 182670 | || |||| || ||||| ||| | || || || ||| ||| || |||||||||| Sbjct 12218453 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 12218512 Query 182671 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG-CCTGATTGGA 182729 | || ||||| | || ||||| ||| | | ||||||||||||||||| ||| || | Sbjct 12218513 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAA 12218571 Query 182730 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTC 182789 | |||| || ||||| || || || |||||||| |||||||| || || ||| ||| Sbjct 12218572 TTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 12218631 Query 182790 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 182849 || || ||||| | || || || |||||| || ||||| |||||||| ||||| Sbjct 12218632 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 12218691 Query 182850 ATCTTCAGGT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTC 182906 || || | | |||| || |||| ||||||| || || |||||| | ||||| || Sbjct 12218692 ATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTT 12218748 Query 182907 CATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTC 182966 |||||||||||||| || ||| |||| || | || ||||| | ||||| |||| || Sbjct 12218749 CATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCT 12218808 Query 182967 ACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGAT 183026 || ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 12218809 ACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAAC 12218868 Query 183027 TCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATC 183086 | ||||| | || || || ||||| ||||| || || || || ||||||||||||||| Sbjct 12218869 CCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATC 12218928 Query 183087 TTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTC 183146 || |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 12218929 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTA 12218988 Query 183147 ATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTAT 183206 | ||| | ||| | | || |||| | | || || ||| | || || ||||| ||| Sbjct 12218989 ACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTAT 12219048 Query 183207 GATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACA 183266 || ||||| | || || | ||||| |||||||| || || ||||| ||||| || Sbjct 12219049 GACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACT 12219108 Query 183267 AAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACAT 183326 || || || ||| | || ||||| | ||||||||| || | || ||||| || ||| Sbjct 12219109 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCAT 12219168 Query 183327 GAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 |||||| | || |||||||| || |||||||| | || ||||| || Sbjct 12219169 GAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 12219215 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 179485 CTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTTGT 179544 |||||||| || || ||||| || | ||| | |||||||| ||||||||| ||||| Sbjct 2824572 CTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGTTCTTGT 2824513 Query 179545 TCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGCGATCAATCGTTTTTG 179604 ||| |||||||||||| | | | ||||||||||||||| || || || | Sbjct 2824512 TCAAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTGATCAGTCTGACCAGAGTTTCCTT 2824453 Query 179605 GATGACGATCAAATGGAGTC-GGGATTTATTCTGACTTGCGTATCTTATCCTACTAGTGA 179663 ||||| || || || | ||| || ||| |||| ||||| | ||||||||||| ||| Sbjct 2824452 GATGATGAGCAGATTG-GTCAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACTTCTGA 2824394 Query 179664 T 179664 | Sbjct 2824393 T 2824393 >seq74 Length=21493 Score = 181 bits (200), Expect = 1e-40 Identities = 241/336 (72%), Gaps = 9/336 (3%) Strand=Plus/Minus Query 181638 GGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTT 181697 ||||||| ||||| ||||||||| | || |||||||| || || || || ||||| ||| Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944 Query 181698 GGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTC 181757 || || |||||||||| | ||||||| || ||||| | || |||||| | Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893 Query 181758 GCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTT 181817 || || ||||| ||||| || || ||||| || || | || | ||||| ||||| || Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833 Query 181818 AACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAAC 181877 ||||| ||||| ||||| |||||||| || | | || | ||||| ||||| | || Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773 Query 181878 ACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAAC 181937 || ||||| || | | |||||| | | || |||||||| ||||| || || || Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713 Query 181938 GCGCACAACTTCCCGCTTGATCTTGCAGCAGCTGAG 181973 || ||||||||||| || || || || || | |||| Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614612252826880