Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq696 538 5e-148 seq2 461 1e-124 seq74 199 6e-46 >seq696 Length=154923 Score = 538 bits (596), Expect = 5e-148 Identities = 701/967 (72%), Gaps = 2/967 (0%) Strand=Plus/Minus Query 174495 AATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACT 174554 || ||||||||| | || ||||| |||||| | ||||| ||||| || || |||||||| Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284 Query 174555 GTATGTTTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAA 174614 ||| |||||||| ||| | | |||||| ||||| || || || || || |||||| Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224 Query 174615 CCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGT 174674 || || |||| || || | || |||||||| || || || ||||| || |||||| | Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164 Query 174675 TCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATGG 174734 || || || ||| | || || ||||| ||||||||||| || | | || |||||| Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104 Query 174735 CTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGCC 174794 || |||||||||||||||| ||||| |||| | ||||| | ||||| | Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044 Query 174795 TATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGTA 174854 |||||||| |||||||||||||| || ||| | |||||| | |||||||| || Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984 Query 174855 GCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCAA 174914 ||||| || || || |||||||| || | || || ||| | ||||||| | ||||| Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAG 924 Query 174915 GGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGTC 174974 || || || || | ||||| | || |||||||| || ||||||| ||| | || Sbjct 923 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 864 Query 174975 TTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGTC 175034 ||||| || || || ||||| | |||||||| || |||||||| || || || ||||| Sbjct 863 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 804 Query 175035 TTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTG-TCCG 175093 ||||| || || | || || ||||||||||| |||| || || | ||| || | Sbjct 803 TTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAG 745 Query 175094 TGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGAC 175153 || || || |||| ||| || || | ||||||| ||||| ||||||||||| || Sbjct 744 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAAC 685 Query 175154 CTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATT 175213 || ||||| || || || || || || || || || |||||||||||||| ||| || Sbjct 684 TTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 625 Query 175214 CAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTT 175273 |||||| || || || | || ||||||||||| || ||||| || || ||||| ||||| Sbjct 624 CAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTT 565 Query 175274 CACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGTC 175333 || || | ||| || || ||||| |||||||| ||||||||||| |||||||| || Sbjct 564 TACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 505 Query 175334 TGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGG 175393 || | || | ||||| | || | || || ||||| ||| || ||||| | ||| Sbjct 504 AGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 445 Query 175394 TCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGATTTGGCAGC 175453 ||||| |||||||| |||||||| | ||||| ||||||||||| ||||| | || || Sbjct 444 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 385 Query 175454 AGCTGAG 175460 | |||| Sbjct 384 TGTTGAG 378 Score = 461 bits (510), Expect = 1e-124 Identities = 707/1008 (70%), Gaps = 0/1008 (0%) Strand=Plus/Plus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | || | ||| | || |||||||| | Sbjct 32720 TGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCT 32779 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 32780 ATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGT 32839 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| || ||||| | || ||||||| | || ||| || ||| | || Sbjct 32840 AACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAAC 32899 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || || ||||||||| || | | | |||||| | | |||| |||||||| Sbjct 32900 CGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCC 32959 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 32960 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGC 33019 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||||||||| || ||||| | || || || ||| | ||||| |||||||| || || Sbjct 33020 TCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATC 33079 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || || || || || || |||||| |||||| || ||||| ||||| Sbjct 33080 TGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTC 33139 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || || | || ||||||||||||||| ||||||||||| || |||||||| Sbjct 33140 TGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGT 33199 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 || || || ||| ||||| | | ||| | || || || || || |||||| ||||||| Sbjct 33200 AGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCC 33259 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || |||||||||||||| || ||| |||| || | || || |||| || || ||||| Sbjct 33260 ATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGG 33319 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | |||||| |||||||| ||| ||||||||| || || || ||| ||| || Sbjct 33320 TGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTT 33379 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || | ||||| || ||||| ||||| || || |||||||| ||||| || Sbjct 33380 TAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACA 33439 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 33440 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 33499 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || ||| | || || ||||| Sbjct 33500 GGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGC 33559 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| || || ||| || || | ||||| |||||||| || ||||| |||||||| Sbjct 33560 CTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTA 33619 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 || || || || ||| | |||||||| | | || |||||||| || ||||| || Sbjct 33620 TACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCC 33679 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 33680 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 33727 >seq2 Length=19320864 Score = 461 bits (510), Expect = 1e-124 Identities = 707/1008 (70%), Gaps = 0/1008 (0%) Strand=Plus/Minus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | || | ||| | || |||||||| | Sbjct 8803682 TGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCT 8803623 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 8803622 ATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGT 8803563 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| || ||||| | || ||||||| | || ||| || ||| | || Sbjct 8803562 AACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAAC 8803503 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || || ||||||||| || | | | |||||| | | |||| |||||||| Sbjct 8803502 CGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCC 8803443 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 8803442 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGC 8803383 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||||||||| || ||||| | || || || ||| | ||||| |||||||| || || Sbjct 8803382 TCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATC 8803323 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || || || || || || |||||| |||||| || ||||| ||||| Sbjct 8803322 TGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTC 8803263 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || || | || ||||||||||||||| ||||||||||| || |||||||| Sbjct 8803262 TGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGT 8803203 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 || || || ||| ||||| | | ||| | || || || || || |||||| ||||||| Sbjct 8803202 AGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCC 8803143 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || |||||||||||||| || ||| |||| || | || || |||| || || ||||| Sbjct 8803142 ATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGG 8803083 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | |||||| |||||||| ||| ||||||||| || || || ||| ||| || Sbjct 8803082 TGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTT 8803023 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || | ||||| || ||||| ||||| || || |||||||| ||||| || Sbjct 8803022 TAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACA 8802963 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 8802962 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 8802903 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || ||| | || || ||||| Sbjct 8802902 GGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGC 8802843 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| || || ||| || || | ||||| |||||||| || ||||| |||||||| Sbjct 8802842 CTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTA 8802783 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 || || || || ||| | |||||||| | | || |||||||| || ||||| || Sbjct 8802782 TACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCC 8802723 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 8802722 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 8802675 Score = 457 bits (506), Expect = 1e-123 Identities = 706/1008 (70%), Gaps = 0/1008 (0%) Strand=Plus/Plus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | || | ||| | || |||||||| | Sbjct 9134797 TGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCT 9134856 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 9134857 ATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGT 9134916 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| || ||||| | || ||||||| | || ||| || ||| | || Sbjct 9134917 AACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAAC 9134976 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || || ||||||||| || | | | |||||| | | |||| |||||||| Sbjct 9134977 CGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCC 9135036 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 9135037 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGC 9135096 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||||||||| || ||||| | || || || ||| | ||||| |||||||| || || Sbjct 9135097 TCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATC 9135156 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || || || || || || |||||| |||||| || ||||| ||||| Sbjct 9135157 TGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTC 9135216 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || || | || ||||||||||||||| ||||||||||| || |||||||| Sbjct 9135217 TGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGT 9135276 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 || || || ||| ||||| | | ||| | || || || || || |||||| ||||||| Sbjct 9135277 AGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCC 9135336 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || |||||||||||||| || ||| |||| || | || || |||| || || ||||| Sbjct 9135337 ATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGG 9135396 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | |||||| |||||||| ||| ||||||||| || || || ||| ||| || Sbjct 9135397 TGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTT 9135456 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || | ||||| || ||||| ||||| || || ||| |||| ||||| || Sbjct 9135457 TAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCACA 9135516 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 9135517 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 9135576 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || ||| | || || ||||| Sbjct 9135577 GGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGC 9135636 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| || || ||| || || | ||||| |||||||| || ||||| |||||||| Sbjct 9135637 CTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTA 9135696 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 || || || || ||| | |||||||| | | || |||||||| || ||||| || Sbjct 9135697 TACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCC 9135756 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 9135757 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 9135804 Score = 421 bits (466), Expect = 1e-112 Identities = 695/1008 (69%), Gaps = 20/1008 (2%) Strand=Plus/Plus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | || | ||| | || |||||||| | Sbjct 12218225 TGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCT 12218284 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 12218285 ATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGT 12218344 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| || ||||| | || ||||||| | || ||| || ||| | || Sbjct 12218345 AACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAAC 12218404 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || || ||||||||| || ||||| |||||||| Sbjct 12218405 CGCTGCAGTTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGTCC 12218444 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 12218445 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGC 12218504 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||||||||| || ||||| | || || || ||| | ||||| |||||||| || || Sbjct 12218505 TCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATC 12218564 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || || || || || || |||||| |||||| || ||||| ||||| Sbjct 12218565 TGTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTC 12218624 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || || | || ||||||||||||||| ||||||||||| || |||||||| Sbjct 12218625 TGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGT 12218684 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 || || || ||| ||||| | | ||| | || || || || || |||||| ||||||| Sbjct 12218685 AGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCC 12218744 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || |||||||||||||| || ||| |||| || | || || |||| || || |||| Sbjct 12218745 ATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGT 12218804 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | |||||| |||||||| ||| ||||||||| || || || ||| ||| || Sbjct 12218805 TGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTT 12218864 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || | ||||| || ||||| ||||| || || |||||||| ||||| || Sbjct 12218865 TAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACA 12218924 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 12218925 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 12218984 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || ||| | || || ||||| Sbjct 12218985 GGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGC 12219044 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| ||||| | | || || | ||||| |||||||| || ||||| |||||||| Sbjct 12219045 CTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTA 12219104 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 || || || || ||| | |||||||| | | || |||||| | || ||||| || Sbjct 12219105 TACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCC 12219164 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 12219165 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 12219212 >seq74 Length=21493 Score = 199 bits (220), Expect = 6e-46 Identities = 245/336 (73%), Gaps = 9/336 (3%) Strand=Plus/Minus Query 175125 GGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTC 175184 ||||||| ||||| ||||||||| | || || ||||| || || || ||||| || || Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944 Query 175185 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTA 175244 || || |||||||||| | ||||||| || || || | || ||||||||| Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893 Query 175245 GCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTC 175304 || || ||||| || || ||||| ||||| || || | ||| || ||| ||||| ||| Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833 Query 175305 AACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAAC 175364 ||||| ||||||||||| |||||||| || || | || | ||||| | || | || Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773 Query 175365 ACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAAT 175424 || ||||| ||| || ||||| | || |||| |||||||| |||||||| | ||| Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713 Query 175425 GCACACAACTTCCCACTAGATTTGGCAGCAGCTGAG 175460 || ||||||||||| ||||| | || || | |||| Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729923249612480