Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq696 607 1e-168 seq2 506 2e-138 seq74 221 1e-52 >seq696 Length=154923 Score = 607 bits (672), Expect = 1e-168 Identities = 738/1003 (74%), Gaps = 2/1003 (0%) Strand=Plus/Minus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 ||||| | ||| |||| ||| | || ||| | || |||| ||||| ||||| || Sbjct 1370 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1311 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGTTTCATCGTTGCTTTCGTAGCAGCACCT 178980 ||||| ||||| || | | |||||| | ||| || | || ||| | || || ||| Sbjct 1310 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1251 Query 178981 CCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAAC 179040 || || |||||||| || || |||||||| || |||| || || | || |||||||| Sbjct 1250 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 1191 Query 179041 ATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATC 179100 || || || ||||| || | || | ||| || |||||| | || || ||||| ||| Sbjct 1190 ATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 1131 Query 179101 TGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGTC 179160 |||||||| ||||| | ||||| ||||| || ||||||||||||| |||| | || Sbjct 1130 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 1071 Query 179161 TTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGT 179220 | ||||| | | || | | |||||||| ||||||||||||||| || |||| Sbjct 1070 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1011 Query 179221 CTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCA 179280 || ||||||||||| ||||| |||||||| || || || || || ||||||| ||| Sbjct 1010 CTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 951 Query 179281 GTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATC 179340 || ||| | ||||||| | ||||| || ||| ||||||| ||||||||| || ||| Sbjct 950 GTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 891 Query 179341 TCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCG 179400 ||||||||||| |||| ||| |||||||||| || || |||||||| ||||||||||| Sbjct 890 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 831 Query 179401 TTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGA 179460 || || ||| | ||||| ||||| |||||||| || || ||||| ||||||||| || Sbjct 830 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGT 771 Query 179461 AGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATGG 179519 | || ||||| | | ||| || | ||||| || || | || || || | || Sbjct 770 TCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 712 Query 179520 TTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGG 179579 ||| | ||||| ||||||||||| || || ||||| || || || || || || || || Sbjct 711 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 652 Query 179580 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGC 179639 || ||||||||||||||||| || ||||| || || ||||| || |||||| | || Sbjct 651 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 592 Query 179640 TGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAA 179699 || |||||||| || || || ||||| |||||| | || | || ||||| ||||| Sbjct 591 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 532 Query 179700 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACAC 179759 ||| || |||||||| |||||||| || | |||| ||||||||||||| |||| || Sbjct 531 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 472 Query 179760 ATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGC 179819 ||||| || | | |||||||| | |||||||||||||||||||| ||||| || Sbjct 471 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 412 Query 179820 ACACAACTTCCCACTCGACCTTGCTGCTGCTGAGTCTACACCT 179862 ||||||||||| || ||||| ||||||| |||| || || || Sbjct 411 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCATCT 369 Score = 506 bits (560), Expect = 2e-138 Identities = 700/980 (71%), Gaps = 0/980 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 |||||||| || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 32748 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32807 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| || || || | || Sbjct 32808 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 32867 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCT 180230 ||||||| | |||||| || ||| | || || || || || || |||||| | | Sbjct 32868 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 32927 Query 180231 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGG 180290 | | |||||| | | |||| ||||||||||| | || || |||| || ||| Sbjct 32928 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 32987 Query 180291 TGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGA 180350 || ||| | || || || ||| ||| || ||||||||||| || ||||| |||| || Sbjct 32988 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 33047 Query 180351 TTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATT 180410 |||||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 33048 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATC 33107 Query 180411 GCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAG 180470 |||||||||||||| || ||||| ||||| || || || || || ||||| ||||| Sbjct 33108 GCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAA 33167 Query 180471 TCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTT 180530 || ||||||||||||| || |||||| ||||| || || ||| ||||| | |||||| Sbjct 33168 TCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTT 33227 Query 180531 CTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATA 180590 | || || || || || ||||| | ||||| || |||||||||||||| || ||| || Sbjct 33228 TTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTA 33287 Query 180591 CTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAA 180650 || || | || |||||| || || ||||| | ||||| || || || | | |||| Sbjct 33288 CTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAA 33347 Query 180651 GATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTAC 180710 ||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 33348 GATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTAT 33407 Query 180711 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAG 180770 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 33408 TCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAA 33467 Query 180771 CGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATT 180830 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || || Sbjct 33468 CGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTT 33527 Query 180831 GGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGA 180890 || | | ||||| ||| | ||||| ||||| || || ||||| || || ||| | Sbjct 33528 GGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGT 33587 Query 180891 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGA 180950 ||||| |||||||| || || ||||| ||||| || || || || || || || ||||| Sbjct 33588 GCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGT 33647 Query 180951 CTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAA 181010 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 33648 ATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 33707 Query 181011 GTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 33708 GTTCTACCACGTGGAAACGC 33727 >seq2 Length=19320864 Score = 506 bits (560), Expect = 2e-138 Identities = 700/980 (71%), Gaps = 0/980 (0%) Strand=Plus/Minus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 |||||||| || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 8803654 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8803595 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| || || || | || Sbjct 8803594 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 8803535 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCT 180230 ||||||| | |||||| || ||| | || || || || || || |||||| | | Sbjct 8803534 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 8803475 Query 180231 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGG 180290 | | |||||| | | |||| ||||||||||| | || || |||| || ||| Sbjct 8803474 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 8803415 Query 180291 TGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGA 180350 || ||| | || || || ||| ||| || ||||||||||| || ||||| |||| || Sbjct 8803414 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 8803355 Query 180351 TTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATT 180410 |||||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 8803354 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATC 8803295 Query 180411 GCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAG 180470 |||||||||||||| || ||||| ||||| || || || || || ||||| ||||| Sbjct 8803294 GCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAA 8803235 Query 180471 TCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTT 180530 || ||||||||||||| || |||||| ||||| || || ||| ||||| | |||||| Sbjct 8803234 TCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTT 8803175 Query 180531 CTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATA 180590 | || || || || || ||||| | ||||| || |||||||||||||| || ||| || Sbjct 8803174 TTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTA 8803115 Query 180591 CTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAA 180650 || || | || |||||| || || ||||| | ||||| || || || | | |||| Sbjct 8803114 CTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAA 8803055 Query 180651 GATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTAC 180710 ||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 8803054 GATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTAT 8802995 Query 180711 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAG 180770 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 8802994 TCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAA 8802935 Query 180771 CGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATT 180830 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || || Sbjct 8802934 CGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTT 8802875 Query 180831 GGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGA 180890 || | | ||||| ||| | ||||| ||||| || || ||||| || || ||| | Sbjct 8802874 GGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGT 8802815 Query 180891 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGA 180950 ||||| |||||||| || || ||||| ||||| || || || || || || || ||||| Sbjct 8802814 GCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGT 8802755 Query 180951 CTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAA 181010 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 8802754 ATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 8802695 Query 181011 GTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 8802694 GTTCTACCACGTGGAAACGC 8802675 Score = 500 bits (554), Expect = 1e-136 Identities = 699/980 (71%), Gaps = 0/980 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 |||||||| || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 9134825 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 9134884 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| || || || | || Sbjct 9134885 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 9134944 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCT 180230 ||||||| | |||||| || ||| | || || || || || || |||||| | | Sbjct 9134945 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 9135004 Query 180231 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGG 180290 | | |||||| | | |||| ||||||||||| | || || |||| || ||| Sbjct 9135005 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 9135064 Query 180291 TGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGA 180350 || ||| | || || || ||| ||| || ||||||||||| || ||||| |||| || Sbjct 9135065 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 9135124 Query 180351 TTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATT 180410 |||||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 9135125 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATC 9135184 Query 180411 GCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAG 180470 |||||||||||||| || ||||| ||||| || || || || || ||||| ||||| Sbjct 9135185 GCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAA 9135244 Query 180471 TCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTT 180530 || ||||||||||||| || |||||| ||||| || || ||| ||||| | |||||| Sbjct 9135245 TCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTT 9135304 Query 180531 CTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATA 180590 | || || || || || ||||| | ||||| || |||||||||||||| || ||| || Sbjct 9135305 TTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTA 9135364 Query 180591 CTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAA 180650 || || | || |||||| || || ||||| | ||||| || || || | | |||| Sbjct 9135365 CTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAA 9135424 Query 180651 GATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTAC 180710 ||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 9135425 GATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTAT 9135484 Query 180711 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAG 180770 || |||||||| || ||| |||| ||||| || ||||| || |||| ||||| || || Sbjct 9135485 TCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAA 9135544 Query 180771 CGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATT 180830 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || || Sbjct 9135545 CGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTT 9135604 Query 180831 GGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGA 180890 || | | ||||| ||| | ||||| ||||| || || ||||| || || ||| | Sbjct 9135605 GGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGT 9135664 Query 180891 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGA 180950 ||||| |||||||| || || ||||| ||||| || || || || || || || ||||| Sbjct 9135665 GCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGT 9135724 Query 180951 CTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAA 181010 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 9135725 ATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 9135784 Query 181011 GTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 9135785 GTTCTACCACGTGGAAACGC 9135804 Score = 455 bits (504), Expect = 4e-123 Identities = 686/980 (70%), Gaps = 20/980 (2%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 |||||||| || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 12218253 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 12218312 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| || || || | || Sbjct 12218313 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 12218372 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCT 180230 ||||||| | |||||| || ||| | || || || || || || |||||| Sbjct 12218373 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTA----- 12218427 Query 180231 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGG 180290 || ||||| ||||||||||| | || || |||| || ||| Sbjct 12218428 ---------------CTCCTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 12218472 Query 180291 TGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGA 180350 || ||| | || || || ||| ||| || ||||||||||| || ||||| |||| || Sbjct 12218473 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 12218532 Query 180351 TTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATT 180410 |||||| |||| || |||||||| || || | || | || || || ||||| || Sbjct 12218533 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCATATAATGCAATC 12218592 Query 180411 GCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAG 180470 |||||||||||||| || ||||| ||||| || || || || || ||||| ||||| Sbjct 12218593 GCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAA 12218652 Query 180471 TCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTT 180530 || ||||||||||||| || |||||| ||||| || || ||| ||||| | |||||| Sbjct 12218653 TCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTT 12218712 Query 180531 CTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATA 180590 | || || || || || ||||| | ||||| || |||||||||||||| || ||| || Sbjct 12218713 TTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTA 12218772 Query 180591 CTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAA 180650 || || | || |||||| || || |||| | ||||| || || || | | |||| Sbjct 12218773 CTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGTAGAAAATACTTTATTTGAA 12218832 Query 180651 GATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTAC 180710 ||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 12218833 GATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTAT 12218892 Query 180711 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAG 180770 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 12218893 TCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAA 12218952 Query 180771 CGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATT 180830 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || || Sbjct 12218953 CGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTT 12219012 Query 180831 GGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGA 180890 || | | ||||| ||| | ||||| ||||| || || || || | || ||| | Sbjct 12219013 GGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAATCTGT 12219072 Query 180891 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGA 180950 ||||| |||||||| || || ||||| ||||| || || || || || || || ||||| Sbjct 12219073 GCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGT 12219132 Query 180951 CTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAA 181010 | ||||| ||| || | || ||||| || || |||||| | || |||||||| || Sbjct 12219133 ATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 12219192 Query 181011 GTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 12219193 GTTCTACCACGTGGAAACGC 12219212 >seq74 Length=21493 Score = 221 bits (244), Expect = 1e-52 Identities = 255/345 (74%), Gaps = 9/345 (3%) Strand=Plus/Minus Query 179518 GGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTC 179577 ||||| | ||||| ||||||||| | || || ||||| || || || ||||| || || Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944 Query 179578 GGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTT 179637 || || |||||||||| | | ||||| || || ||||| || |||||| | Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893 Query 179638 GCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTC 179697 || || |||||||| || || || ||||| |||||| | || | || ||||| ||| Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833 Query 179698 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAAC 179757 ||||| || |||||||| |||||||| || | |||| ||||||| ||||| |||| Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773 Query 179758 ACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAAC 179817 || ||||| || | | |||||| | || |||||||||||||||||||| ||||| Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713 Query 179818 GCACACAACTTCCCACTCGACCTTGCTGCTGCTGAGTCTACACCT 179862 || ||||||||||| || ||||| ||||||| |||| || || || Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCATCT 10668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610324290132480