Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq6 109 5e-19
seq4 96.9 3e-15
seq7 95.1 1e-14
seq2 95.1 1e-14
seq3 86.0 5e-12
>seq6
Length=25113588
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | || || |||||||| || |||||||| || |||| | || ||
Sbjct 8749026 ACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCCAGTGTGCGACCATCCTCT 8749085
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| ||||| || | || || | ||| || ||||| || | |||||||||||
Sbjct 8749086 AGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCCTGA 8749145
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| ||| | | || | ||||||| | ||||| ||||| || || | |||
Sbjct 8749146 ATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCTAGGGTGATTGTTTTA 8749205
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || ||||| ||||||||||||||||||
Sbjct 8749206 CCAGTGAGAGTCTTCACAAAGATTTGCATA 8749235
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || ||||| ||||||||||| || | |||| | || ||
Sbjct 22901557 ACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTCA 22901498
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || ||| | ||||||||||| || ||||| || | ||| || || || |
Sbjct 22901497 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 22901438
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| |||| | | || | ||||| | | || || || || || || | ||
Sbjct 22901437 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTTC 22901378
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||||| ||||| || || ||||||
Sbjct 22901377 CCGGTCAGAGTCTTCACGAAAATCTGCATA 22901348
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
|||||||| | ||||| ||||| || ||||||||||| || ||| || | |||||
Sbjct 10622298 ACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAGTCAGCGAGTGTA-CGACCATCTTC 10622240
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|||||||| || ||| | || || | ||| || || || || | |||||||||||
Sbjct 10622239 AAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCTGGTGGGATTCCCTCTTTATCCTG 10622180
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|||||| ||| | | || | |||||||| ||||| || ||||| || | |||
Sbjct 10622179 GATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGAGTGATTGTTTT 10622120
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| || ||||||||||| ||||||
Sbjct 10622119 ACCAGTCAATGTCTTCACAAAGATCTGCATA 10622089
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
||||| |||| || || |||||||| | ||||| || || ||||| |||||||| ||
Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || ||||||| || || || |||||| | || | | ||| || ||||| ||
Sbjct 22900831 AAAGTTCTGC-CGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 22900773
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||||||| || ||||||| ||| | | || | ||||| | | || ||
Sbjct 22900772 AATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 22900713
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | ||| |||| || || |||| || || || ||||||||||||
Sbjct 22900712 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 22900664
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || || || || |||||||| || | ||| | || ||
Sbjct 22901329 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTCA 22901270
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || ||| | ||||||||||| || ||||| || | || || || || |
Sbjct 22901269 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 22901210
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| |||| | | || | ||||| | | || ||||| ||||| || | |||
Sbjct 22901209 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATCGTCTTG 22901150
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| |||| ||| || || ||||| |||||| ||
Sbjct 22901149 CCAGTCAAAGTCTTGACGAAGATCTGCATACCT 22901117
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| || |||||||| ||| ||| | | || | |||||
Sbjct 905894 ACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTCAAGGTACGACCATCTTCT 905953
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||||||||||||| | || | | ||| || ||||| || | || || || ||
Sbjct 905954 AGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 906013
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | | || | ||||| | | ||||| || ||||| || | |||
Sbjct 906014 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTG 906073
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || ||||||||||||||||||||
Sbjct 906074 CCAGTGAGTGTTTTCACAAAGATTTGCAT 906102
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097
|||||||| | || || || || || || ||||| || || || | || | || ||
Sbjct 10622982 ACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG-CAAGTGTCCGACCATCCTC 10622924
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|||||||| || ||| | ||||| | |||||| ||||| || || || || || ||
Sbjct 10622923 AAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGACCCCTTCCTTGTCCTG 10622864
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|||||| || | | | || | ||||||| | ||||| || | ||| |||| ||
Sbjct 10622863 AATCTTGGCCTTGACGTTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTAATAGTCTT 10622804
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| |||| ||| |||||||||||||||||
Sbjct 10622803 GCCTGTCAAAGTCTTCACAAAGATTTGCAT 10622774
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
||||| || | ||||| ||||| || | ||||| || || ||||| |||||||| ||
Sbjct 22758569 CCTCCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22758628
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || | ||||| || ||||| ||||| | || | | ||| || ||||| ||
Sbjct 22758629 AAAGTTCTGC-CATCTTCAAGTTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGG 22758687
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||||||| || ||||||| ||| | | || | ||||| | | || ||
Sbjct 22758688 GATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 22758747
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | ||| |||| || || |||| || || || ||||||||||||
Sbjct 22758748 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 22758796
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || ||||||||| || | || | || ||
Sbjct 23404855 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCA 23404796
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | ||||||||||| || ||||| || | ||| || ||||| |
Sbjct 23404795 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGG 23404736
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| |||| | | || | ||||| | | || || || || || |||| ||
Sbjct 23404735 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCCAGCGTGATAGTCTTC 23404676
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||||||| ||||| || || |||||
Sbjct 23404675 CCGGTCAGAGTCTTCACGAAAATCTGCAT 23404647
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
|||||||| | ||||| ||||| || || |||||||| || ||| | |||| ||
Sbjct 905438 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTC-CGTCCTC 905496
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||||| |||||||| | || || | |||||| ||||| || | || || || ||
Sbjct 905497 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 905556
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||||| ||| | | || | ||||||| ||||| || || || || | |||
Sbjct 905557 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 905616
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || ||||||||||| ||||||
Sbjct 905617 ACCAGTGAGGGTCTTCACAAAGATCTGCATA 905647
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
||||| || | || || || || || || |||||||| ||| | || ||| | || ||
Sbjct 23404627 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCTAAGGT-GCGGCCATCCTC 23404569
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|||||||| || ||| | ||||||||||| || || || || | || || || ||
Sbjct 23404568 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTG 23404509
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||||| |||| | || | ||||||| | || ||||| || || || | ||
Sbjct 23404508 GATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTT 23404449
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| ||| || |||||||| ||||||
Sbjct 23404448 ACCGGTCAAAGTCTTGACAAAGATCTGCATA 23404418
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || || || || |||||||| || |||| | || ||
Sbjct 22758359 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 22758418
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | ||||||||||| || ||||| || | ||| || || || |
Sbjct 22758419 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 22758478
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| |||| | | || | ||||| | | || || || | || || | ||
Sbjct 22758479 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATGGTCTTT 22758538
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| || ||||||||||| || || |||||| ||
Sbjct 22758539 CCGGTGAGAGTTTTCACGAAAATCTGCATACCT 22758571
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || |||| ||||| || | || | ||||| || || ||||| ||||| || |||
Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| || || | || || ||||||||||| ||| | ||||| | |||||| || || ||
Sbjct 905252 AAAGTC-CGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || || || || ||||| || | | || | ||||||| | || ||
Sbjct 905311 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 905370
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | |||||| | ||||| || || || ||||||||||| ||||||
Sbjct 905371 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 905419
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| ||||| || || ||||| ||| || |||| | || ||
Sbjct 22886738 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCCAAAGTGCGACCATCCTCA 22886679
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | ||||||||||| || ||| || | ||| || || || |
Sbjct 22886678 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAAGGGATACCTTCCTTGTCCTGG 22886619
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| |||| | | || | ||||| | | || ||||| || || || | ||
Sbjct 22886618 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTT 22886559
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| |||| ||| || || ||||| |||||| ||
Sbjct 22886558 CCGGTCAAAGTCTTGACGAAGATCTGCATACCT 22886526
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| ||||| || || ||||| ||| || |||| | || ||
Sbjct 23069747 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCCAAAGTGCGACCATCCTCA 23069688
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | ||||||||||| || ||| || | ||| || || || |
Sbjct 23069687 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAAGGGATACCTTCCTTGTCCTGG 23069628
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| |||| | | || | ||||| | | || ||||| || || || | ||
Sbjct 23069627 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTT 23069568
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| |||| ||| || || ||||| |||||| ||
Sbjct 23069567 CCGGTCAAAGTCTTGACGAAGATCTGCATACCT 23069535
>seq4
Length=23328337
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109
||| || || || || || ||||| ||| | | | || ||||||||||||| || ||
Sbjct 22908927 CGTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCC 22908868
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
|||| |||| | ||||| |||||||| || | ||| || || || ||||||| ||
Sbjct 22908867 GGCGAAAATCAATCGCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 22908808
Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229
| | || | ||||| | || || || || ||||| || | || ||||| || ||
Sbjct 22908807 GACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGT 22908748
Query 27230 TTTCACAAAGATTTGCAT 27247
|||||| ||||| |||||
Sbjct 22908747 TTTCACGAAGATCTGCAT 22908730
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| || |||||||| ||| || | | || | |||||
Sbjct 15771815 ACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCCAAGGTACGACCATCTTCT 15771874
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||||||||||||| | || | | ||| || ||||| || | || || || ||
Sbjct 15771875 AGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 15771934
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | | || | ||||| | | ||||| || ||||| || | |||
Sbjct 15771935 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTG 15771994
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || ||||||||||||||||||||
Sbjct 15771995 CCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
|||||||| | ||||| ||||| || || |||||||| || ||| | |||| ||
Sbjct 15771359 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTC-CGTCCTC 15771417
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||||| |||||||| | || || | |||||| ||||| || | || || || ||
Sbjct 15771418 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 15771477
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||||| ||| | | || | ||||||| ||||| || || || || | |||
Sbjct 15771478 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 15771537
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || ||||||||||| ||||||
Sbjct 15771538 ACCAGTGAGGGTCTTCACAAAGATCTGCATA 15771568
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || |||| ||||| || | || | ||||| || || ||||| ||||| || |||
Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| || || | || || ||||||||||| ||| | ||||| | |||||| || || ||
Sbjct 15771173 AAAGTC-CGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || || || || ||||| || | | || | ||||||| | || ||
Sbjct 15771232 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 15771291
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | |||||| | ||||| || || || ||||||||||| ||||||
Sbjct 15771292 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 15771340
>seq7
Length=24649197
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| || | || | || || || ||||| || ||||| || | | |||| |
Sbjct 18993684 CGCAACACAAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCA 18993743
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| || || || || || ||| | || || | |||||| ||||| || | || |||||
Sbjct 18993744 TCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTG 18993803
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||| ||||| | | || | ||||||| | |||||||||||||| ||
Sbjct 18993804 TCTTGAATCTTAGCTTTCACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATG 18993863
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| || || |||||||||||||| || |||||
Sbjct 18993864 GTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 18993898
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || ||||| ||||| || | | |||| |||| || ||||| ||||||
Sbjct 18994158 GTCGACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGACCGTCCTCAAGCTGCTTACCG 18994217
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || | ||| || ||||| || | || || ||||| ||||| |||
Sbjct 18994218 GCAAAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTAGCTTTA 18994277
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
|| | || | ||||||| | ||||| || | |||||| | |||||| || || |||
Sbjct 18994278 AGATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCAGTGAGGGTT 18994337
Query 27231 TTCACAAAGATTTGCAT 27247
||||||||||| |||||
Sbjct 18994338 TTCACAAAGATCTGCAT 18994354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| ||||| | || | ||| | ||| | || || || || || || ||||| ||
Sbjct 18994354 TGCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAG 18994413
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | || | || |||||||| ||||||||| | || || | |||||| |||| |
Sbjct 18994414 CAAGAGTACGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGTTGGTCCGTAG 18994473
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | || || || || |||||||| || | | | || | || |||| | ||| |
Sbjct 18994474 GGATTCCTTCCTTGTCTTCGATCTTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGA 18994533
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || ||||| | || || || ||||| || ||||||||||||||
Sbjct 18994534 CCTCAAGGGTTATCGTCTTCCCTGTAAGAGTCTTAACAAAGATTTGCAT 18994582
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||||| | ||||| || | || || || || ||||||||||| ||
Sbjct 18994582 TGCCACCTCTCAACCTAAGAACCAAGTGGAGGGTTGACTCCTTCTGAATATTGTAATCAG 18994641
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
|| | || |||| || || ||||||||||| | || || | ||| || ||||||
Sbjct 18994642 CCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCA 18994701
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | || || || || |||||| || | | || | ||||| | | ||| |
Sbjct 18994702 GGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCGGAGCTTTCGA 18994761
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || |||||||| | ||||| || ||||| || || ||||| ||||||
Sbjct 18994762 CCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCATA 18994811
>seq2
Length=19320864
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
|||||||| | ||||| |||||||| || ||||| || ||| | || || | || ||
Sbjct 9126492 ACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCTAAAGTA-CGACCATCCTC 9126550
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
||||| |||||||| | ||||| | |||||||||||| || | ||| || || ||
Sbjct 9126551 AAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGGATACCTTCCTTGTCTTG 9126610
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||| || | | || | |||||||| | ||||| || | ||| || | ||
Sbjct 9126611 AATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTT 9126670
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || |||||||| || ||||||
Sbjct 9126671 TCCAGTGAGGGTCTTCACAAAAATCTGCATA 9126701
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || ||||| || || | || | || |||
Sbjct 9214589 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCG 9214648
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||||||||| ||| | ||||| | |||||| || ||||| | ||||| || ||
Sbjct 9214649 AGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGCGGGATCCCCTCCTTGTCCTGA 9214708
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | | || | ||||||| | ||||| || | || |||| |||
Sbjct 9214709 ATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTG 9214768
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| ||| ||||||||||||||||||
Sbjct 9214769 CCTGTCAAAGTCTTCACAAAGATTTGCATA 9214798
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097
||||| || | || || || || || || ||||| || ||| | || || | || ||
Sbjct 9125808 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTC-CGACCATCCTC 9125866
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|||||||||||| ||| | ||||| | |||||| || || || | ||||| || ||
Sbjct 9125867 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 9125926
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||| || | | | || | ||||||| | ||||| || | || || | ||
Sbjct 9125927 AATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTT 9125986
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| |||| |||||||||||| |||||||||
Sbjct 9125987 GCCTGTCAAAGTTTTCACAAATATTTGCATA 9126017
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || ||||| || ||||| || | | |||| | ||||| ||||| ||||||
Sbjct 9215057 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCAAGCTGCTTACCG 9215116
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || | |||||| || || || | ||||| || || ||||| ||
Sbjct 9215117 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTG 9215176
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||||| | ||||| || | || || | ||||| |||| ||||
Sbjct 9215177 ACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTTGCCTGTCAAAGTT 9215236
Query 27231 TTCACAAAGATTTGCATA 27248
|||||||| |||||||||
Sbjct 9215237 TTCACAAATATTTGCATA 9215254
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| || | || | ||||| || || || || |||||||| || | || |
Sbjct 9215267 CGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCGACCA 9215326
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| |||||||||||||| ||| | ||||| | |||||| || || || | || || ||
Sbjct 9215327 TCCTCGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTG 9215386
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| ||| | | || | |||||||| | ||||| || | ||| ||
Sbjct 9215387 TCCTGGATCTTAGCTTTAACATTATCGATAGTGTCTGAGCTCTCAACCTCCAAAGTAATG 9215446
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || || || || || |||||||| || ||||||
Sbjct 9215447 GTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCATA 9215482
>seq3
Length=24464547
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| ||||| || ||||| || | || || | ||| || || || || | || ||||||
Sbjct 3876998 TCCTCGAGTTGCTTACCTGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTA 3877057
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||||| || | | | || | ||||||| | ||| || || ||||||||
Sbjct 3877058 TCTTGGATCTTGGCCTTGACGTTGTCAATTGTGTCTGAGCTTTCGACCTCAAGAGTTATG 3877117
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || ||||| ||||| |||||||||||||||||
Sbjct 3877118 GTCTTTCCCGTAAGAGTCTTCACAAAGATTTGCAT 3877152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424930795493952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |