Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6 109 5e-19 seq4 96.9 3e-15 seq7 95.1 1e-14 seq2 95.1 1e-14 seq3 86.0 5e-12 >seq6 Length=25113588 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || |||||||| || |||||||| || |||| | || || Sbjct 8749026 ACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCCAGTGTGCGACCATCCTCT 8749085 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| || | || || | ||| || ||||| || | ||||||||||| Sbjct 8749086 AGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCCTGA 8749145 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | ||||||| | ||||| ||||| || || | ||| Sbjct 8749146 ATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCTAGGGTGATTGTTTTA 8749205 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| |||||||||||||||||| Sbjct 8749206 CCAGTGAGAGTCTTCACAAAGATTTGCATA 8749235 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || ||||| ||||||||||| || | |||| | || || Sbjct 22901557 ACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTCA 22901498 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||||||||| || ||||| || | ||| || || || | Sbjct 22901497 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 22901438 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || || || || || || | || Sbjct 22901437 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTTC 22901378 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||| ||||| || || |||||| Sbjct 22901377 CCGGTCAGAGTCTTCACGAAAATCTGCATA 22901348 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| ||||| || ||||||||||| || ||| || | ||||| Sbjct 10622298 ACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAGTCAGCGAGTGTA-CGACCATCTTC 10622240 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | || || | ||| || || || || | ||||||||||| Sbjct 10622239 AAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCTGGTGGGATTCCCTCTTTATCCTG 10622180 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| ||| | | || | |||||||| ||||| || ||||| || | ||| Sbjct 10622179 GATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGAGTGATTGTTTT 10622120 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || ||||||||||| |||||| Sbjct 10622119 ACCAGTCAATGTCTTCACAAAGATCTGCATA 10622089 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| || || |||||||| | ||||| || || ||||| |||||||| || Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| || || || |||||| | || | | ||| || ||||| || Sbjct 22900831 AAAGTTCTGC-CGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 22900773 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| ||| | | || | ||||| | | || || Sbjct 22900772 AATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 22900713 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| || || || |||||||||||| Sbjct 22900712 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 22900664 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || |||||||| || | ||| | || || Sbjct 22901329 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTCA 22901270 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||||||||| || ||||| || | || || || || | Sbjct 22901269 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 22901210 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || ||||| ||||| || | ||| Sbjct 22901209 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATCGTCTTG 22901150 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || |||| ||| || || ||||| |||||| || Sbjct 22901149 CCAGTCAAAGTCTTGACGAAGATCTGCATACCT 22901117 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || |||||||| ||| ||| | | || | ||||| Sbjct 905894 ACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTCAAGGTACGACCATCTTCT 905953 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||||||| | || | | ||| || ||||| || | || || || || Sbjct 905954 AGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 906013 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||| | | ||||| || ||||| || | ||| Sbjct 906014 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTG 906073 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||||||||||||||| Sbjct 906074 CCAGTGAGTGTTTTCACAAAGATTTGCAT 906102 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 |||||||| | || || || || || || ||||| || || || | || | || || Sbjct 10622982 ACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG-CAAGTGTCCGACCATCCTC 10622924 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | ||||| | |||||| ||||| || || || || || || Sbjct 10622923 AAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGACCCCTTCCTTGTCCTG 10622864 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | | || | ||||||| | ||||| || | ||| |||| || Sbjct 10622863 AATCTTGGCCTTGACGTTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTAATAGTCTT 10622804 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| |||| ||| ||||||||||||||||| Sbjct 10622803 GCCTGTCAAAGTCTTCACAAAGATTTGCAT 10622774 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| || | ||||| ||||| || | ||||| || || ||||| |||||||| || Sbjct 22758569 CCTCCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22758628 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | ||||| || ||||| ||||| | || | | ||| || ||||| || Sbjct 22758629 AAAGTTCTGC-CATCTTCAAGTTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGG 22758687 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| ||| | | || | ||||| | | || || Sbjct 22758688 GATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 22758747 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| || || || |||||||||||| Sbjct 22758748 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 22758796 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||||||| || | || | || || Sbjct 23404855 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCA 23404796 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | ||| || ||||| | Sbjct 23404795 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGG 23404736 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || || || || || |||| || Sbjct 23404735 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCCAGCGTGATAGTCTTC 23404676 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| ||||| || || ||||| Sbjct 23404675 CCGGTCAGAGTCTTCACGAAAATCTGCAT 23404647 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| ||||| || || |||||||| || ||| | |||| || Sbjct 905438 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTC-CGTCCTC 905496 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| |||||||| | || || | |||||| ||||| || | || || || || Sbjct 905497 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 905556 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| ||| | | || | ||||||| ||||| || || || || | ||| Sbjct 905557 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 905616 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || ||||||||||| |||||| Sbjct 905617 ACCAGTGAGGGTCTTCACAAAGATCTGCATA 905647 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || |||||||| ||| | || ||| | || || Sbjct 23404627 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCTAAGGT-GCGGCCATCCTC 23404569 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | ||||||||||| || || || || | || || || || Sbjct 23404568 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTG 23404509 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| |||| | || | ||||||| | || ||||| || || || | || Sbjct 23404508 GATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTT 23404449 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || |||||||| |||||| Sbjct 23404448 ACCGGTCAAAGTCTTGACAAAGATCTGCATA 23404418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || |||||||| || |||| | || || Sbjct 22758359 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 22758418 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | ||| || || || | Sbjct 22758419 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 22758478 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || || || | || || | || Sbjct 22758479 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATGGTCTTT 22758538 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || ||||||||||| || || |||||| || Sbjct 22758539 CCGGTGAGAGTTTTCACGAAAATCTGCATACCT 22758571 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || |||| ||||| || | || | ||||| || || ||||| ||||| || ||| Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || || | || || ||||||||||| ||| | ||||| | |||||| || || || Sbjct 905252 AAAGTC-CGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || ||||| || | | || | ||||||| | || || Sbjct 905311 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 905370 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | |||||| | ||||| || || || ||||||||||| |||||| Sbjct 905371 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 905419 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| ||||| || || ||||| ||| || |||| | || || Sbjct 22886738 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCCAAAGTGCGACCATCCTCA 22886679 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||| || | ||| || || || | Sbjct 22886678 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAAGGGATACCTTCCTTGTCCTGG 22886619 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | ||||| | | || ||||| || || || | || Sbjct 22886618 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTT 22886559 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || |||| ||| || || ||||| |||||| || Sbjct 22886558 CCGGTCAAAGTCTTGACGAAGATCTGCATACCT 22886526 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| ||||| || || ||||| ||| || |||| | || || Sbjct 23069747 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCCAAAGTGCGACCATCCTCA 23069688 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||| || | ||| || || || | Sbjct 23069687 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAAGGGATACCTTCCTTGTCCTGG 23069628 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | ||||| | | || ||||| || || || | || Sbjct 23069627 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTT 23069568 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || |||| ||| || || ||||| |||||| || Sbjct 23069567 CCGGTCAAAGTCTTGACGAAGATCTGCATACCT 23069535 >seq4 Length=23328337 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||| ||| | | | || ||||||||||||| || || Sbjct 22908927 CGTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCC 22908868 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| |||| | ||||| |||||||| || | ||| || || || ||||||| || Sbjct 22908867 GGCGAAAATCAATCGCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 22908808 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | || | ||||| | || || || || ||||| || | || ||||| || || Sbjct 22908807 GACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGT 22908748 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||| ||||| ||||| Sbjct 22908747 TTTCACGAAGATCTGCAT 22908730 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || |||||||| ||| || | | || | ||||| Sbjct 15771815 ACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCCAAGGTACGACCATCTTCT 15771874 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||||||| | || | | ||| || ||||| || | || || || || Sbjct 15771875 AGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 15771934 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||| | | ||||| || ||||| || | ||| Sbjct 15771935 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTG 15771994 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||||||||||||||| Sbjct 15771995 CCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| ||||| || || |||||||| || ||| | |||| || Sbjct 15771359 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTC-CGTCCTC 15771417 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| |||||||| | || || | |||||| ||||| || | || || || || Sbjct 15771418 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 15771477 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| ||| | | || | ||||||| ||||| || || || || | ||| Sbjct 15771478 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 15771537 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || ||||||||||| |||||| Sbjct 15771538 ACCAGTGAGGGTCTTCACAAAGATCTGCATA 15771568 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || |||| ||||| || | || | ||||| || || ||||| ||||| || ||| Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || || | || || ||||||||||| ||| | ||||| | |||||| || || || Sbjct 15771173 AAAGTC-CGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || ||||| || | | || | ||||||| | || || Sbjct 15771232 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 15771291 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | |||||| | ||||| || || || ||||||||||| |||||| Sbjct 15771292 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 15771340 >seq7 Length=24649197 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | || | || || || ||||| || ||||| || | | |||| | Sbjct 18993684 CGCAACACAAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCA 18993743 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || || || || || ||| | || || | |||||| ||||| || | || ||||| Sbjct 18993744 TCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTG 18993803 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||||| | | || | ||||||| | |||||||||||||| || Sbjct 18993804 TCTTGAATCTTAGCTTTCACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATG 18993863 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || || |||||||||||||| || ||||| Sbjct 18993864 GTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 18993898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||| || | | |||| |||| || ||||| |||||| Sbjct 18994158 GTCGACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGACCGTCCTCAAGCTGCTTACCG 18994217 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | ||| || ||||| || | || || ||||| ||||| ||| Sbjct 18994218 GCAAAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTAGCTTTA 18994277 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 || | || | ||||||| | ||||| || | |||||| | |||||| || || ||| Sbjct 18994278 AGATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCAGTGAGGGTT 18994337 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 18994338 TTCACAAAGATCTGCAT 18994354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | ||| | ||| | || || || || || || ||||| || Sbjct 18994354 TGCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAG 18994413 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | || | || |||||||| ||||||||| | || || | |||||| |||| | Sbjct 18994414 CAAGAGTACGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGTTGGTCCGTAG 18994473 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||||| || | | | || | || |||| | ||| | Sbjct 18994474 GGATTCCTTCCTTGTCTTCGATCTTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGA 18994533 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || ||||| | || || || ||||| || |||||||||||||| Sbjct 18994534 CCTCAAGGGTTATCGTCTTCCCTGTAAGAGTCTTAACAAAGATTTGCAT 18994582 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || | ||||| | ||||| || | || || || || ||||||||||| || Sbjct 18994582 TGCCACCTCTCAACCTAAGAACCAAGTGGAGGGTTGACTCCTTCTGAATATTGTAATCAG 18994641 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || |||| || || ||||||||||| | || || | ||| || |||||| Sbjct 18994642 CCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCA 18994701 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| || | | || | ||||| | | ||| | Sbjct 18994702 GGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCGGAGCTTTCGA 18994761 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || |||||||| | ||||| || ||||| || || ||||| |||||| Sbjct 18994762 CCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCATA 18994811 >seq2 Length=19320864 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| |||||||| || ||||| || ||| | || || | || || Sbjct 9126492 ACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCTAAAGTA-CGACCATCCTC 9126550 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| |||||||| | ||||| | |||||||||||| || | ||| || || || Sbjct 9126551 AAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGGATACCTTCCTTGTCTTG 9126610 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | || | |||||||| | ||||| || | ||| || | || Sbjct 9126611 AATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTT 9126670 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || |||||||| || |||||| Sbjct 9126671 TCCAGTGAGGGTCTTCACAAAAATCTGCATA 9126701 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||| || || | || | || ||| Sbjct 9214589 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCG 9214648 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| ||| | ||||| | |||||| || ||||| | ||||| || || Sbjct 9214649 AGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGCGGGATCCCCTCCTTGTCCTGA 9214708 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||||| | ||||| || | || |||| ||| Sbjct 9214709 ATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTG 9214768 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| |||||||||||||||||| Sbjct 9214769 CCTGTCAAAGTCTTCACAAAGATTTGCATA 9214798 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || ||||| || ||| | || || | || || Sbjct 9125808 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTC-CGACCATCCTC 9125866 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||||||| ||| | ||||| | |||||| || || || | ||||| || || Sbjct 9125867 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 9125926 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | | || | ||||||| | ||||| || | || || | || Sbjct 9125927 AATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTT 9125986 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| |||||||||||| ||||||||| Sbjct 9125987 GCCTGTCAAAGTTTTCACAAATATTTGCATA 9126017 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || ||||| || | | |||| | ||||| ||||| |||||| Sbjct 9215057 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCAAGCTGCTTACCG 9215116 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | |||||| || || || | ||||| || || ||||| || Sbjct 9215117 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTG 9215176 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| | ||||| || | || || | ||||| |||| |||| Sbjct 9215177 ACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTTGCCTGTCAAAGTT 9215236 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||| ||||||||| Sbjct 9215237 TTCACAAATATTTGCATA 9215254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | || | ||||| || || || || |||||||| || | || | Sbjct 9215267 CGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCGACCA 9215326 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || |||||||||||||| ||| | ||||| | |||||| || || || | || || || Sbjct 9215327 TCCTCGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTG 9215386 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||| | | || | |||||||| | ||||| || | ||| || Sbjct 9215387 TCCTGGATCTTAGCTTTAACATTATCGATAGTGTCTGAGCTCTCAACCTCCAAAGTAATG 9215446 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || || || |||||||| || |||||| Sbjct 9215447 GTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCATA 9215482 >seq3 Length=24464547 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || ||||| || ||||| || | || || | ||| || || || || | || |||||| Sbjct 3876998 TCCTCGAGTTGCTTACCTGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTA 3877057 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | | || | ||||||| | ||| || || |||||||| Sbjct 3877058 TCTTGGATCTTGGCCTTGACGTTGTCAATTGTGTCTGAGCTTTCGACCTCAAGAGTTATG 3877117 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| ||||| ||||||||||||||||| Sbjct 3877118 GTCTTTCCCGTAAGAGTCTTCACAAAGATTTGCAT 3877152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930795493952