Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 3e-14
>seq3
Length=24464547
Score = 93.3 bits (102), Expect = 3e-14
Identities = 130/181 (72%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 111730 TAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGT 111789
|| ||||| ||||| || ||| |||||| || || | ||| | | | || | |||
Sbjct 23281363 TACACATGAGCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGTGA 23281422
Query 111790 GCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATA 111849
|| | |||| | || || ||| ||| ||||||||||||||||||||| |||||||||
Sbjct 23281423 GCCAGCATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAATGGCACACCAAGGCCCATA 23281482
Query 111850 TCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAA 111909
|| | || | ||||| | |||||||| |||| || || |||||| || || |||
Sbjct 23281483 TCCGCTGAACGCTGATACATTTGACATGAGAGTTCCCCTTCTGCCACATAGAACTG-CAA 23281541
Query 111910 A 111910
|
Sbjct 23281542 A 23281542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391942275321448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |