Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 2e-12
>seq7
Length=24649197
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/194 (71%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 59929 aaaaaGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGCATCA----TTTGCACAACGT 59984
|||||||||||||||| ||| | ||||| | ||| | ||| || || | |
Sbjct 21840556 AAAAAGCAGAATGGGCTATGAAATGGATCAAC---GGATC-TCAAAGCTTCGCTGAGAGA 21840501
Query 59985 CTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTC 60044
|| |||||||||| ||||| ||||| || ||||||||||| || ||| | || |||
Sbjct 21840500 ATCGTAGCTTTTGCTTGCGTTGAAGGTATATTCTTCTCTGGTAGCTTTTGTTCGATATTC 21840441
Query 60045 TGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGG 60104
||| | || || || || | ||||| || || | ||||| ||||| ||||||| |
Sbjct 21840440 TGGTTGAAGAAACGAGGTTTAATGCCTGGACTCACATTCTCTAACGAATTGATTTCGAGA 21840381
Query 60105 GACGAGGGCCTCCA 60118
||||| || || ||
Sbjct 21840380 GACGAAGGTCTTCA 21840367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520027834240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |