Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq696 695 0.0
seq2 572 2e-158
seq74 250 3e-61
>seq696
Length=154923
Score = 695 bits (770), Expect = 0.0
Identities = 752/994 (76%), Gaps = 2/994 (0%)
Strand=Plus/Minus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
|||||||||||| |||| || || || ||| | || | || ||||| || || ||
Sbjct 1370 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1311
Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGTTTCATCATCGCCTTCATCGGTGCTCC 164046
||||| |||| ||| | | | || ||| | ||| || ||||| ||||| | ||||||
Sbjct 1310 ATGAT-CCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 1252
Query 164047 TCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 164106
||| || || || ||||| || || ||||| || |||| || || | || ||||||||
Sbjct 1251 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 1192
Query 164107 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 164166
|| || || ||||| |||| ||| ||||| ||||| ||| |||| || ||||| ||
Sbjct 1191 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 1132
Query 164167 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 164226
||||||||| ||| | || |||||||| |||||||||||||||| |||| ||||
Sbjct 1131 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 1072
Query 164227 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 164286
| ||||| | |||| | | ||| ||||||||||||||||||||| || |||
Sbjct 1071 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1012
Query 164287 TCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 164346
||| |||||||||||||||||| || ||||| || |||||||| || || |||| |||
Sbjct 1011 TCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 952
Query 164347 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 164406
|| ||| || ||||||| | ||||| || ||| ||||||| |||||||| || ||
Sbjct 951 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 892
Query 164407 CTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCC 164466
|||||| || ||||||| ||| | || |||||||||||||||||||| || ||||||||
Sbjct 891 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 832
Query 164467 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 164526
|| || ||| | || ||||| ||||| || ||||| || || || ||||| ||||| ||
Sbjct 831 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 772
Query 164527 TTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGG 164586
||| |||| |||||| || | | || ||||| |||||||| || || | ||
Sbjct 771 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 712
Query 164587 TTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGG 164646
||||| || || || ||||||||||| |||||||| || || ||||||||||| |||||
Sbjct 711 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 652
Query 164647 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGC 164706
|| |||| |||||||| ||| |||||||| || ||||| | || |||||| | ||
Sbjct 651 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 592
Query 164707 AGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAA 164766
|| ||||| || || ||||| |||||||||||| | || |||| || ||||| |||||
Sbjct 591 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 532
Query 164767 CCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACAC 164826
||| || |||||||| |||||||| || | | ||| |||| || ||||| | || ||
Sbjct 531 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 472
Query 164827 CTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGC 164886
||||| || || | ||||||||| || || |||||||| ||||| || ||||||||
Sbjct 471 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 412
Query 164887 TCACAACTTCCCTCTCGACCTTGCTGCTGCTGAG 164920
||||||||||||||| ||||| ||||||| ||||
Sbjct 411 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 378
Score = 572 bits (634), Expect = 2e-158
Identities = 723/991 (73%), Gaps = 2/991 (0%)
Strand=Plus/Plus
Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239
|| ||||| ||||||||||| || |||||||| || | || ||||| ||| ||| |
Sbjct 32745 AGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTC 32804
Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299
||| | ||||||||| | || || || || || || || ||||||||||| ||| |
Sbjct 32805 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTG 32864
Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359
|| ||||||||| | || ||| || ||| | || || |||||||||||||| || |
Sbjct 32865 GCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAAT 32924
Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419
| | | |||||| | || | || ||||||||||| | ||||| || || | ||
Sbjct 32925 AGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 32984
Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479
||||| ||| | || || || ||| ||||||| || |||||||| || || ||| | |||
Sbjct 32985 TGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATA 33044
Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538
||||| ||| | || || |||||||| || ||| || || | | || ||||| |||||
Sbjct 33045 GGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGC 33103
Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598
|| || ||||||||||| |||||||| || ||| ||| || || || ||||| || ||
Sbjct 33104 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 33163
Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 165658
||||| |||||||| || || || || || || || || || |||||| | ||
Sbjct 33164 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 33223
Query 165659 CTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGG 165718
||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || ||
Sbjct 33224 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 33283
Query 165719 TATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTA 165778
| | | |||| || |||| | || |||||||||| ||| ||||| |||||||| |
Sbjct 33284 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 33343
Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838
|||||||||||| ||||| || ||| || ||| | ||||| | || |||||
Sbjct 33344 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 33403
Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898
|||||| |||||||| |||||||| || ||||| || || ||||| ||||||| |||
Sbjct 33404 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 33463
Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958
||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 33464 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 33523
Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 166018
| |||| | | ||||| || | || || ||||| ||||| || || || ||||| ||
Sbjct 33524 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 33583
Query 166019 TAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGA 166078
| || || || |||||||| ||||| || |||||||| ||||| || || | || ||
Sbjct 33584 CCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 33643
Query 166079 AGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGA 166138
||| | ||||| ||| |||| || ||| || |||||||| ||| || | ||||||||
Sbjct 33644 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 33703
Query 166139 AGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
|| || | ||| | || ||||| ||||||
Sbjct 33704 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 33734
>seq2
Length=19320864
Score = 572 bits (634), Expect = 2e-158
Identities = 723/991 (73%), Gaps = 2/991 (0%)
Strand=Plus/Minus
Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239
|| ||||| ||||||||||| || |||||||| || | || ||||| ||| ||| |
Sbjct 8803657 AGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTC 8803598
Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299
||| | ||||||||| | || || || || || || || ||||||||||| ||| |
Sbjct 8803597 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTG 8803538
Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359
|| ||||||||| | || ||| || ||| | || || |||||||||||||| || |
Sbjct 8803537 GCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAAT 8803478
Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419
| | | |||||| | || | || ||||||||||| | ||||| || || | ||
Sbjct 8803477 AGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 8803418
Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479
||||| ||| | || || || ||| ||||||| || |||||||| || || ||| | |||
Sbjct 8803417 TGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATA 8803358
Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538
||||| ||| | || || |||||||| || ||| || || | | || ||||| |||||
Sbjct 8803357 GGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGC 8803299
Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598
|| || ||||||||||| |||||||| || ||| ||| || || || ||||| || ||
Sbjct 8803298 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 8803239
Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 165658
||||| |||||||| || || || || || || || || || |||||| | ||
Sbjct 8803238 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 8803179
Query 165659 CTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGG 165718
||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || ||
Sbjct 8803178 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 8803119
Query 165719 TATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTA 165778
| | | |||| || |||| | || |||||||||| ||| ||||| |||||||| |
Sbjct 8803118 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 8803059
Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838
|||||||||||| ||||| || ||| || ||| | ||||| | || |||||
Sbjct 8803058 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 8802999
Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898
|||||| |||||||| |||||||| || ||||| || || ||||| ||||||| |||
Sbjct 8802998 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 8802939
Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958
||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 8802938 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 8802879
Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 166018
| |||| | | ||||| || | || || ||||| ||||| || || || ||||| ||
Sbjct 8802878 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 8802819
Query 166019 TAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGA 166078
| || || || |||||||| ||||| || |||||||| ||||| || || | || ||
Sbjct 8802818 CCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 8802759
Query 166079 AGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGA 166138
||| | ||||| ||| |||| || ||| || |||||||| ||| || | ||||||||
Sbjct 8802758 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 8802699
Query 166139 AGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
|| || | ||| | || ||||| ||||||
Sbjct 8802698 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 8802668
Score = 567 bits (628), Expect = 8e-157
Identities = 722/991 (73%), Gaps = 2/991 (0%)
Strand=Plus/Plus
Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239
|| ||||| ||||||||||| || |||||||| || | || ||||| ||| ||| |
Sbjct 9134822 AGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTC 9134881
Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299
||| | ||||||||| | || || || || || || || ||||||||||| ||| |
Sbjct 9134882 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTG 9134941
Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359
|| ||||||||| | || ||| || ||| | || || |||||||||||||| || |
Sbjct 9134942 GCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAAT 9135001
Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419
| | | |||||| | || | || ||||||||||| | ||||| || || | ||
Sbjct 9135002 AGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 9135061
Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479
||||| ||| | || || || ||| ||||||| || |||||||| || || ||| | |||
Sbjct 9135062 TGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATA 9135121
Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538
||||| ||| | || || |||||||| || ||| || || | | || ||||| |||||
Sbjct 9135122 GGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGC 9135180
Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598
|| || ||||||||||| |||||||| || ||| ||| || || || ||||| || ||
Sbjct 9135181 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 9135240
Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 165658
||||| |||||||| || || || || || || || || || |||||| | ||
Sbjct 9135241 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 9135300
Query 165659 CTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGG 165718
||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || ||
Sbjct 9135301 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 9135360
Query 165719 TATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTA 165778
| | | |||| || |||| | || |||||||||| ||| ||||| |||||||| |
Sbjct 9135361 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 9135420
Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838
|||||||||||| ||||| || ||| || ||| | ||||| | || |||||
Sbjct 9135421 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 9135480
Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898
|||||| |||||||| |||||| | || ||||| || || ||||| ||||||| |||
Sbjct 9135481 TTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 9135540
Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958
||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 9135541 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 9135600
Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 166018
| |||| | | ||||| || | || || ||||| ||||| || || || ||||| ||
Sbjct 9135601 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 9135660
Query 166019 TAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGA 166078
| || || || |||||||| ||||| || |||||||| ||||| || || | || ||
Sbjct 9135661 CCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 9135720
Query 166079 AGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGA 166138
||| | ||||| ||| |||| || ||| || |||||||| ||| || | ||||||||
Sbjct 9135721 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 9135780
Query 166139 AGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
|| || | ||| | || ||||| ||||||
Sbjct 9135781 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 9135811
Score = 531 bits (588), Expect = 6e-146
Identities = 711/991 (72%), Gaps = 22/991 (2%)
Strand=Plus/Plus
Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239
|| ||||| ||||||||||| || |||||||| || | || ||||| ||| ||| |
Sbjct 12218250 AGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTC 12218309
Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299
||| | ||||||||| | || || || || || || || ||||||||||| ||| |
Sbjct 12218310 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTG 12218369
Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359
|| ||||||||| | || ||| || ||| | || || |||||||||||||| ||
Sbjct 12218370 GCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGC---- 12218425
Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419
| || || || ||||||||||| | ||||| || || | ||
Sbjct 12218426 ----------------TACTCCTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 12218469
Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479
||||| ||| | || || || ||| ||||||| || |||||||| || || ||| | |||
Sbjct 12218470 TGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATA 12218529
Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538
||||| ||| | || || |||||||| || ||| || || | | || || || |||||
Sbjct 12218530 GGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCATATAATGC 12218588
Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598
|| || ||||||||||| |||||||| || ||| ||| || || || ||||| || ||
Sbjct 12218589 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 12218648
Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 165658
||||| |||||||| || || || || || || || || || |||||| | ||
Sbjct 12218649 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 12218708
Query 165659 CTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGG 165718
||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || ||
Sbjct 12218709 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 12218768
Query 165719 TATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTA 165778
| | | |||| || |||| | || ||||||| || ||| ||||| |||||||| |
Sbjct 12218769 TGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGTAGAAAATACTTTATT 12218828
Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838
|||||||||||| ||||| || ||| || ||| | ||||| | || |||||
Sbjct 12218829 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 12218888
Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898
|||||| |||||||| |||||||| || ||||| || || ||||| ||||||| |||
Sbjct 12218889 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 12218948
Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958
||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 12218949 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 12219008
Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 166018
| |||| | | ||||| || | || || ||||| ||||| ||||| || |||| ||
Sbjct 12219009 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAAT 12219068
Query 166019 TAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGA 166078
| || || || |||||||| ||||| || |||||||| ||||| || || | || ||
Sbjct 12219069 CTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 12219128
Query 166079 AGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGA 166138
||| | ||||| ||| || | || ||| || |||||||| ||| || | ||||||||
Sbjct 12219129 AGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 12219188
Query 166139 AGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
|| || | ||| | || ||||| ||||||
Sbjct 12219189 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 12219219
Score = 127 bits (140), Expect = 2e-24
Identities = 176/244 (72%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
|||||||||||| |||| || || || ||| | || | || ||||| || || ||
Sbjct 8835029 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8835088
Query 163988 ATGATTCCCTGCC-TGCTGGCAGCGACTACATGTTTCATCATCGCCTTCATCGGTGCTCC 164046
|||| ||||| || | || | || ||| | ||| | ||||| ||||| | ||||||
Sbjct 8835089 ATGA-TCCCTACCTTATTGACCGCAACTTCCGTTTTTGTTATCGCATTCATTGCTGCTCC 8835147
Query 164047 TCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 164106
||| || || || ||||| || || ||||| || |||| || || | || ||||||||
Sbjct 8835148 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 8835207
Query 164107 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 164166
|| || || ||||| |||| ||| ||||| ||||| ||| |||| || ||||| ||
Sbjct 8835208 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 8835267
Query 164167 CTGG 164170
||||
Sbjct 8835268 CTGG 8835271
>seq74
Length=21493
Score = 250 bits (276), Expect = 3e-61
Identities = 274/366 (75%), Gaps = 9/366 (2%)
Strand=Plus/Minus
Query 164555 GAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACC 164614
|| |||| |||||||| || || | ||||||| || ||||| |||||| ||||
Sbjct 11033 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAATAAACT 10974
Query 164615 TACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTC 164674
|||||||| || || ||||| ||||| ||||| || |||| |||| | ||
Sbjct 10973 TACAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCGTT---------TC 10923
Query 164675 AACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTT 164734
||||| || ||||| | || |||||| | || || ||||| || || ||||| ||||||
Sbjct 10922 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 10863
Query 164735 ACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCC 164794
|||||| | || ||||||| ||||| |||||||| || |||||||| |||||||| ||
Sbjct 10862 ACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 10803
Query 164795 ATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 164854
| | ||| |||| || ||||| | || || ||||| || || | |||||| ||
Sbjct 10802 GTAGTTGATAGTCAAGGGCGTGTTATTAATACTTGGGCTGATATTATTAACCGTACTAAC 10743
Query 164855 CTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCT 164914
| || |||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||
Sbjct 10742 TTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 10683
Query 164915 GCTGAG 164920
| ||||
Sbjct 10682 GTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557649548406720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |