Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 113 4e-20
seq7 107 2e-18
seq4 102 8e-17
seq2 95.1 1e-14
>seq6
Length=25113588
Score = 113 bits (124), Expect = 4e-20
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||||||||||| ||| || || ||||||||||||||| ||||| |
Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | |||| || || ||||| |||||||| |||| | ||| ||||||| |||
Sbjct 22900831 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 22900772
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||| |||||| || | || |||| || | | | ||||| ||| |||
Sbjct 22900771 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 22900716
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| || || || || || |||| |||||| ||||| || |||||
Sbjct 22900715 CACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22900665
Score = 113 bits (124), Expect = 4e-20
Identities = 167/233 (72%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||| || || || ||||||||| ||||| |||||||
Sbjct 23404874 GCCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 23404815
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| || || | || || |||||||| || ||||| || || ||||| ||||||| ||
Sbjct 23404814 CAAAGTACGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 23404755
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACT 41810
| | ||||| ||| ||| || ||||| || | || | |||| |||| |
Sbjct 23404754 GATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTC---T 23404699
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||||| ||| || || || || ||||| ||||| |||||||||||||||
Sbjct 23404698 CCACCTCCAGCGTGATAGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATG 23404646
Score = 109 bits (120), Expect = 5e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| || |||| || || || ||||||||| ||||| ||||| |
Sbjct 23404417 CCACCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 23404358
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || ||||||||||||||||| |||| | ||| ||||||| ||
Sbjct 23404357 AAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 23404298
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| || ||||| ||| ||| || |||| ||| | | | || || ||| |||
Sbjct 23404297 ATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCAATGGTATCAGAGCT---CTC 23404242
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || || || || || ||||| ||||| ||||||||
Sbjct 23404241 TACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 23404191
Score = 102 bits (112), Expect = 8e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| ||||| ||||| | ||||| | | || ||
Sbjct 22758815 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCC 22758874
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| |||||| |||||||| |||| | ||| || |||| |||| | |||||| || ||
Sbjct 22758875 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCT-TG 22758933
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
| | || || | ||| | | | |||||| ||||||||| | || ||||| ||
Sbjct 22758934 AATCTTGGCCTTCACGTTGTCGATAGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTT 22758993
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || ||||| ||||||||||||||
Sbjct 22758994 CCCCGTTAGGGTCTTGACGAAAATCTGCAT 22759023
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| ||||| |
Sbjct 22758341 CCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 22758400
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||||| | || || |||||||| || ||||| || || ||||| ||||||| ||
Sbjct 22758401 AAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 22758460
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTC 41811
| | ||||||||| ||| || ||||| || | || | |||| |||| ||
Sbjct 22758461 ATACCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTC---TC 22758516
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || || || || || || || ||||||||||||||
Sbjct 22758517 TACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAAATCTGCAT 22758567
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || |||||| || || || ||||| |
Sbjct 22901575 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCC 22901516
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || ||||| || || ||||| || || ||||| ||||||| ||
Sbjct 22901515 AAGGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 22901456
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTC 41811
| | ||||||||| ||| || ||||| || | || | |||| |||| ||
Sbjct 22901455 ATACCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTC---TC 22901400
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || || || || || ||||| ||||| ||||||||||||||
Sbjct 22901399 TACCTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCAT 22901349
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| ||||| ||||| | ||||| | | || ||
Sbjct 22900645 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCC 22900586
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| |||||| |||||||| |||| | ||| || |||| |||| | |||||| || |
Sbjct 22900585 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCTTGG 22900526
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||||| || | | | ||||| |||||| || | || || |||||
Sbjct 22900525 ATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTCTCCACTTCAAGAGTAATAGTTTT 22900467
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || ||||| ||||||||||||||
Sbjct 22900466 TCCCGTTAGGGTCTTGACGAAAATCTGCAT 22900437
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| || || || ||||||||| ||||| || || |
Sbjct 22901119 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 22901060
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || | || || | ||| || |||||||| |||| | ||| ||||||| ||
Sbjct 22901059 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 22901000
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814
| | ||||| ||| ||| || ||||| || | || |||||| ||||||
Sbjct 22900999 ATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTCTCCAC 22900941
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || || ||||| || |||||||||||
Sbjct 22900940 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || || ||| ||||| ||||| ||||| | || || |
Sbjct 905429 AGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTT 905488
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || |||||||| ||||| || || || | ||||||||||| |||| | |||
Sbjct 905489 CCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCC 905548
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823
|||||| || | || |||| || | | ||||| ||| ||||| | ||
Sbjct 905549 TTGTCC-TGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGT 905607
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||||||| || || ||||| || || ||||||||
Sbjct 905608 AATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 905646
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||| || || || || |||||||||||||| || || |
Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
| || || | || || ||||| || || ||||| || || | ||||||||| | |||
Sbjct 905252 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGGG 905311
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811
| | || ||||||||| ||| | || || | || | | | ||| || || |||
Sbjct 905312 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGAC-ATTATCAATTGTGTCT-GAGCTCTC 905367
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| ||||| || || || || || ||||| || || ||||||||
Sbjct 905368 CACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418
Score = 86.0 bits (94), Expect = 6e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| || || || ||||||||||||||| ||||| |
Sbjct 22758569 CCTCCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22758628
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | | || || || || || ||||| || |||| | ||| ||||||| ||
Sbjct 22758629 AAAGTTCTGCCATCTTCAAGTTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGG 22758688
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||| |||||| || | || |||| || | | | ||||| ||| |||
Sbjct 22758689 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 22758744
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| || || || || || |||| |||||| ||||| || |||||
Sbjct 22758745 CACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22758795
Score = 86.0 bits (94), Expect = 6e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || || || ||||||||||||||| || || |
Sbjct 23404189 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGCC 23404130
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | | || || || ||||| |||||||| |||| | ||| ||||||| ||
Sbjct 23404129 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 23404070
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||| |||| | || | || |||| ||| | | | ||||| ||| |||
Sbjct 23404069 ATACCCTCTTTGT-CTTGGATCTTGGCTTTCACGTTGTCGATGGTGTCAGAGCT---CTC 23404014
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| || || || || || |||| ||||| || |||||||||||
Sbjct 23404013 CACCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 23403963
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| ||| || || ||||||||| ||||| || || |
Sbjct 10623000 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 10622941
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || ||||| || || ||||| || || | ||||||||||| ||
Sbjct 10622940 AGTGTCCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 10622881
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
|| | ||||||||| ||| | || || | ||| | | ||||| ||| |||
Sbjct 10622880 ACCCCTTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATCGTGTCTGAGCT---CTC 10622825
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| || || || || || |||| ||||| || || || ||||||
Sbjct 10622824 AACCTCCAAAGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCATG 10622773
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| || || |
Sbjct 8748324 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 8748383
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754
|| || || | || || ||||| || || ||||| || || | |||||||||| | |||
Sbjct 8748384 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 8748443
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811
| | || ||||||||| ||| | || || | || | | | ||| || || |||
Sbjct 8748444 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGAC-ATTATCAATTGTGTCT-GAGCTCTC 8748499
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || ||||| |||| |||||||| || || |||||
Sbjct 8748500 AACCTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTTACAAAGATTTGCAT 8748550
>seq7
Length=24649197
Score = 107 bits (118), Expect = 2e-18
Identities = 168/233 (72%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || || || || ||||||||||||||| || || |
Sbjct 18994127 GCCCCCGCGAAGACGAAGGACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCTGC 18994186
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753
|||||||| |||| || |||||||| ||||| || || || | ||| |||||| | ||
Sbjct 18994187 AAGGGTGCGACCGTCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGAGG 18994246
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CT 41810
|| | || ||||| | | ||| | || |||| || | || | ||| || || ||
Sbjct 18994247 GATCCCT-TCCTTAT-CTTGAATCTTAGCTTTAAGATTGTCA-ATTGTGTCT-GAGCTCT 18994302
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| ||||||| ||||| ||||| || || || || || || || |||||||||
Sbjct 18994303 CAACCTCCAAAGTTATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCATG 18994355
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||| || || || || |||||| || ||||| || || |
Sbjct 18993672 CCACCACGAAGACGCAACACAAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGCA 18993731
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || || |||||||| ||||| || || | ||||||||||| ||
Sbjct 18993732 AGGGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGG 18993791
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | || |||| | ||| | || |||| ||| | | | ||||| ||| |||
Sbjct 18993792 ATTCCTTCTTTGT-CTTGAATCTTAGCTTTCACGTTGTCAATGGTGTCTGAGCT---CTC 18993847
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || | || || |||||||| || || || || || || ||||||||
Sbjct 18993848 AACTTCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 18993898
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || ||||| || || ||||||||| ||||| || || |
Sbjct 18994355 GCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 18994414
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || ||||||||||| |||||||| || || | ||||||||||| ||
Sbjct 18994415 AAGAGTACGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGTTGGTCCGTAGG 18994474
Query 41755 AACGCTCTCCTTGTC 41769
| | ||||||||
Sbjct 18994475 GATTCCTTCCTTGTC 18994489
>seq4
Length=23328337
Score = 102 bits (112), Expect = 8e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || ||||| |||||||| ||||| || ||||
Sbjct 22908956 CCACCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 22908897
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || |||| ||||||||||| |||||||| |||| ||||| || |||| ||
Sbjct 22908896 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGATCCGGTGGG 22908837
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| | |||||||| ||| || ||| || | || | ||||| ||||| |
Sbjct 22908836 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCAGAGGACTCGA 22908779
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | || ||||| || ||||| || || || ||||| |||||||| ||
Sbjct 22908778 CCTCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 22908727
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || || ||| ||||| ||||| ||||| | || || |
Sbjct 15771350 AGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTT 15771409
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || |||||||| ||||| || || || | ||||||||||| |||| | |||
Sbjct 15771410 CCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCC 15771469
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823
|||||| || | || |||| || | | ||||| ||| ||||| | ||
Sbjct 15771470 TTGTCC-TGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGT 15771528
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||||||| || || ||||| || || ||||||||
Sbjct 15771529 AATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 15771567
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||| || || || || |||||||||||||| || || |
Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
| || || | || || ||||| || || ||||| || || | ||||||||| | |||
Sbjct 15771173 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGGG 15771232
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811
| | || ||||||||| ||| | || || | || | | | ||| || || |||
Sbjct 15771233 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGAC-ATTATCAATTGTGTCT-GAGCTCTC 15771288
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| ||||| || || || || || ||||| || || ||||||||
Sbjct 15771289 CACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339
>seq2
Length=19320864
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/232 (71%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||| || || || || |||||||| ||||| ||||| |
Sbjct 9215255 CCACCACGAAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCC 9215314
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754
| || || | || |||||||| || || ||||| || || | ||||||||| | |||
Sbjct 9215315 AAAGTCCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 9215374
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| | || ||||||||| ||| || |||| ||| | | |||||| |||| |
Sbjct 9215375 ATCCCT-TCCTTGTCCTGGATCTTA-GCTTTAACATTATCGATAGTGTCTGAGCTC---T 9215429
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| || || || || || || || ||||| || |||||||||||
Sbjct 9215430 CAACCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 9215481
Score = 89.7 bits (98), Expect = 5e-13
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || || ||| ||||| || || || || | ||| |||||
Sbjct 9126711 AGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGA 9126770
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || |||||||| || || || || || | ||| || |||| || | | |||
Sbjct 9126771 CCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCC 9126830
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACT--CCACCTCCACCG 41822
|| ||| ||| | || |||| ||| || | || || ||| | ||||||| |
Sbjct 9126831 TTATCC-TGAATCTTAGCTTTAACATTATCA-ATAGTATCTGAACTTTCAACCTCCAAAG 9126888
Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || ||||| || |||| |||||| || |||||||||||
Sbjct 9126889 TAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 9126928
Score = 89.7 bits (98), Expect = 5e-13
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || || ||| ||||| || || || || | ||| |||||
Sbjct 9215492 AGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGA 9215551
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || |||||||| || || || || || | ||| || |||| || | | |||
Sbjct 9215552 CCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCC 9215611
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACT--CCACCTCCACCG 41822
|| ||| ||| | || |||| ||| || | || || ||| | ||||||| |
Sbjct 9215612 TTATCC-TGAATCTTAGCTTTAACATTATCA-ATAGTATCTGAACTTTCAACCTCCAAAG 9215669
Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || ||||| || |||| |||||| || |||||||||||
Sbjct 9215670 TAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 9215709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462299977955200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |