Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 118 8e-22 >seq2 Length=19698289 Score = 118 bits (130), Expect = 8e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 101708 TGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATC 101767 |||||||| || | | ||||||||| || ||||| || |||| | |||||||| | | Sbjct 7082304 TGAGCATCCCCAAGAACATGGATAAAATCACCAGGAACAAGATCACACACATGAGCCAGC 7082363 Query 101768 ATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCT 101827 |||||||| | |||||| || |||||||||||| ||||| || | |||||||| ||| Sbjct 7082364 ATGCAAGTAAGAAGAGAGTAAGAAGCAATGTTAAACGGCACACCAAGGCCCATATCTGCT 7082423 Query 101828 GATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTG 101877 || | ||||||| |||||| || || | || || |||||||| || Sbjct 7082424 GAACGCTGATACATTTGACATGAGAGTTCCCCTTCTGCCACATAAAACTG 7082473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251169180757