Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 5e-12
>seq1
Length=30427671
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| || | ||||| ||||| ||||| ||||||||| || || | ||
Sbjct 24276822 ATGCAAATCTTTGTGAAAACTTTGACAGGCAAGACCATTACCTTGGAGGTTGAGAGCTCA 24276763
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || |||| || ||| ||||| ||| | | || ||| |||
Sbjct 24276762 GACACAATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAATGGATCCCACCAGACCAA 24276703
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||||| |||||||| || ||||| | || ||| | ||| |||| ||||||||
Sbjct 24276702 CAGAGACTCATCTTTGCTGGTAAACAGCTCGAGGATGGAAGGACTTTGGCTGATTACAAC 24276643
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
|| || || || |||||||||||| | || || ||
Sbjct 24276642 ATCCAGAAAGAGTCTACTCTTCACCTTGTATTGCG 24276608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796764953898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |