Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 136 4e-27 seq2 118 1e-21 seq4 109 6e-19 seq5 102 8e-17 seq1 102 8e-17 >seq3 Length=23459830 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| ||||| || ||||| || ||||| ||| | || || ||| | Sbjct 23037134 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTTGAATC 23037193 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | | | |||| || || | ||||| || || ||||| |||| Sbjct 23037194 ATCCGACACCATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGA 23037253 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | || | ||| || |||||||| || |||| || |||||| |||||| Sbjct 23037254 CCAGCAGCGATTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACCCTCGCCGACTA 23037313 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||| | ||||| ||||| || Sbjct 23037314 CAACATCCAGAAGGAATCGACGCTTCATCTCGT 23037346 Score = 129 bits (142), Expect = 6e-25 Identities = 204/289 (71%), Gaps = 5/289 (2%) Strand=Plus/Minus Query 116612 ATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTC 116671 || ||||| || || ||||| | || ||| ||||||||||| ||||| || || ||| Sbjct 9981003 ATGTTCCCAATTCACTACCCACAGATCTGGGAAATGTACAAAAAAGCCGAAGCATCATTC 9980944 Query 116672 TGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGG---AGCGCTTGAAC 116728 ||||||| ||| || || || || || | |||| ||||||||| | | | ||| Sbjct 9980943 TGGACCGCCGAAGAAGTAGATCTATCACAAGACAACCGCGACTGGGAAAACAGTCTCAAC 9980884 Query 116729 GACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATC 116788 ||| || || || |||||||| ||||| || || || ||||| || ||||| ||| Sbjct 9980883 GACGGTGAACGTCACTTCATCAAACACGTCCTCGCTTTCTTCGCTGCATCTGACGGAATC 9980824 Query 116789 GTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGC 116848 || |||||||| | || ||| || || || || | ||||||| |||| Sbjct 9980823 GTACTAGAGAATCTCGCTTCTCGCTTCATGTCCGATGTTCAAGTCTCTGAGGCGC-GTGC 9980765 Query 116849 -TTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTAT 116896 |||||||| || |||||||| || || ||| | |||||||| |||||| Sbjct 9980764 TTTCTACGGTTTCCAGATCGCGATTGAAAACATCCACTCGGAGATGTAT 9980716 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || | || || ||||| || ||||| ||| | || ||| || | | Sbjct 3005772 ATGCAAATCTTTGTGCAGACTCTTACGGGAAAGACCATAACCCTTGAGGTCAAAAGCTCA 3005713 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCC--CCGCGGAC 40806 |||| | | |||| |||||| || || | || ||||| || |||| || || | Sbjct 3005712 GACACTATCGATAACG-TCAAGGCCAAGATCCAAGATAAAGAAGGAATCCTTCCTCG--C 3005656 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| |||| |||| || || || || || || || | || || || ||| ||| Sbjct 3005655 CAGCAGAGACTTATCTTTGCAGGTAAGCAACTCGAGGATGGTCGTACTCTTGCCGATTAC 3005596 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| ||| | || |||||||| || Sbjct 3005595 AACATCCAGAAAGAGTCAACACTGCATCTTGT 3005564 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||| ||||| | || ||| || || || | || ||||| || | || || ||| || | Sbjct 3006001 AATTCAAATCTACGCAAAGACTCTTACAGAAAAGACCATAACACTTGATGTTGAAACCTC 3005942 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | || | |||||| || || | |||| || ||||| || ||||| Sbjct 3005941 CGACTCCATTCATAATGTCAAGGCTAAGATCCAGAACAAGGAAGGCATTCCTTTAGACCA 3005882 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||||||| |||| || || |||||||| || || | | ||| | || ||||| Sbjct 3005881 GCAACGACTTATCTTTGCTGGTAAACAGCTCGAGGATGGCCTTACCTTGGCTGATTACAA 3005822 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| | || || || | || || | ||||| || || Sbjct 3005821 CATCCAGAAAGAGTCAACTCTCCACTTGGTTCTGAGGTTGAGAGGTGG 3005774 >seq2 Length=19698289 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| ||||| || ||||| || || ||||| |||| ||||| | Sbjct 19344697 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAGTC 19344756 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | | | | |||||| || || | ||||| || || ||||| |||| Sbjct 19344757 CTCTGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGA 19344816 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | || | ||| || || ||||| || |||| || ||| | ||| || Sbjct 19344817 CCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGTACCTTAGCCGATTA 19344876 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||| | ||||| || || || Sbjct 19344877 CAACATCCAGAAGGAATCAACGCTTCACCTTGT 19344909 >seq4 Length=18585056 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||| || | || || || | || Sbjct 1278980 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCC 1278921 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| || || ||||| ||||||| Sbjct 1278920 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCA 1278862 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || |||||||| || || | || || | ||||||||| Sbjct 1278861 GCAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAA 1278802 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 1278801 CATCCAGAAGGAGTCTACCCTTCA 1278778 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||||||| | || || ||| | || Sbjct 2719699 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCC 2719758 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || || || ||||||| Sbjct 2719759 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 2719817 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | || || | ||||||||| Sbjct 2719818 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAA 2719877 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 2719878 CATCCAGAAGGAGTCTACTCTTCA 2719901 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || | || || || |||||||| | || || || | || Sbjct 2588504 ATGCAGATCTTCGTAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCC 2588445 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| || ||||| || ||||||| Sbjct 2588444 GACACCATTGATAACG-TGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 2588386 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | || || | ||||||||| Sbjct 2588385 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAA 2588326 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 2588325 CATCCAGAAGGAGTCTACTCTTCA 2588302 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| || || || || | || || || | Sbjct 2718787 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 2718846 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||||||||| || || ||||||| Sbjct 2718847 GACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCA 2718905 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||| |||| || | | || || |||||||| Sbjct 2718906 GCAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAA 2718965 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || ||||| || Sbjct 2718966 TATCCAGAAGGAGTCCACCCTTCATCTTGT 2718995 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| || || || || | || || || | | Sbjct 2588732 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCT 2588673 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | || || ||||| || || ||||||| Sbjct 2588672 GACACCATTGACAACG-TCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCA 2588614 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || || || || |||| | || | || ||||| Sbjct 2588613 GCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGCAGAACTTTGGCGGATTACAA 2588554 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | ||||| ||| | || ||||| Sbjct 2588553 CATCCAGAAGGAGTCTACGCTTCATTTGGTCTTGCG 2588518 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || || |||||| |||| || ||| | || Sbjct 2718559 ATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGCTCC 2718618 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || |||||||| || |||| || Sbjct 2718619 GACACCATCGACAACGTT-AAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGATCA 2718677 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | ||| ||||| ||||| || || | || || | || ||||| Sbjct 2718678 GCAGAGGCTTATTTTCGCCGGCAAGCAGCTAGAGGATGGCCGTACGTTGGCTGATTACAA 2718737 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| |||| || || Sbjct 2718738 TATCCAGAAGGAATCCACCCTCCA 2718761 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || || ||||| ||||| | || || || | Sbjct 2719015 ATGCAGATTTTCGTTAAGACGTTGACTGGGAAAACTATCACTTTGGAGGTGGAGAGTTCT 2719074 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || || | ||||||||||| || || ||||||| Sbjct 2719075 GACACCATTGATAACG-TGAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCA 2719133 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || ||||| || || || | | || | ||||||||| Sbjct 2719134 GCAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTTTGGCCGACTACAA 2719193 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| |||| || || | || ||||| Sbjct 2719194 CATTCAGAAGGAGTCCACACTCCACTTGGTCTTGCG 2719229 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || |||||||| | || || || | Sbjct 2719243 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCACTTTGGAGGTGGAGAGTTCT 2719302 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || || | ||||||||||| ||||| ||||||| Sbjct 2719303 GACACCATTGATAACG-TGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCA 2719361 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || || || || || | | || | |||||||| Sbjct 2719362 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGATGGAAGAACTTTGGCTGACTACAA 2719421 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| |||| || || | || ||||| Sbjct 2719422 CATTCAGAAGGAGTCCACACTTCACTTGGTCTTGCG 2719457 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| || || || || | || || || | Sbjct 1279436 ATGCAGATTTTCGTCAAGACCTTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 1279377 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||| || || ||||||| Sbjct 1279376 GACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 1279318 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||| |||| || | | || || |||||||| Sbjct 1279317 GCAGAGGTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAA 1279258 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 1279257 CATCCAGAAGGAGTCCACACTTCATCTTGT 1279228 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || |||||| |||| || ||| | | Sbjct 2588960 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCT 2588901 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || || || || || |||| || Sbjct 2588900 GACACCATCGACAACGTT-AAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCA 2588842 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||| |||| || | ||||| | || ||||| Sbjct 2588841 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGCACGTTGGCGGATTACAA 2588782 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| |||| || || Sbjct 2588781 TATCCAGAAGGAATCCACCCTCCA 2588758 >seq5 Length=26975502 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| || || |||||||| |||| || || | | Sbjct 6974463 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCT 6974404 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| ||| || | ||||| || ||||| || | |||||| Sbjct 6974403 GACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 6974344 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||| || || ||||| || || | |||||| | || |||||| Sbjct 6974343 CAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAAC 6974284 Query 40870 ATCCAGAAGGA 40880 |||||||| || Sbjct 6974283 ATCCAGAAAGA 6974273 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||| || | || || ||| | | Sbjct 772212 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCA 772153 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| ||||| || || ||||| | ||||| Sbjct 772152 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAA 772093 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||| || |||||||| || || | ||||| || || |||||| Sbjct 772092 CAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACACTTGCAGATTACAAC 772033 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 772032 ATCCAGAAGGAGTCGACTCTTCA 772010 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||||||||| ||| | || || ||| | | Sbjct 6974235 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCT 6974176 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||| || | ||||| || || ||||| ||||||| Sbjct 6974175 GACACTATTGACAACG-TCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCA 6974117 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| |||| || | ||| || || ||||| || || | | || || |||||||| Sbjct 6974116 GCAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAA 6974057 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| |||||| | || || || || || Sbjct 6974056 TATCCAAAAGGAGTCTACTCTTCACCTTGT 6974027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || ||||| ||||| |||||| | || || || | | Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | || || | || |||||||| ||||| |||||||| Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6973888 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || ||||| || || | ||||| || || |||||| Sbjct 6973887 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 6973828 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || ||| | || || ||| | ||| | || |||| || || Sbjct 6973827 ATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGG 6973781 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || ||||| |||||| | || || || | Sbjct 772440 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCA 772381 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | || || | || |||||||| || || |||| ||| Sbjct 772380 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAG 772321 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || ||||| || || | |||||||| || |||||| Sbjct 772320 CAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAAC 772261 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| |||||| | || || ||||| ||| Sbjct 772260 ATCCAAAAGGAGTCGACACTTCATCTTGTG 772231 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || || |||||||| || | || || || | | Sbjct 6973551 ATGCAGATATTTGTGAAGACCCTTACCGGAAAAACCATTACTCTTGAGGTTGAGAGCTCA 6973492 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || |||| ||||| || || ||||| ||||||| Sbjct 6973491 GACACAATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAA 6973432 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||| || || ||||| || || | || || || || |||||| Sbjct 6973431 CAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGGACTCTTGCAGATTACAAC 6973372 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 6973371 ATCCAGAAGGAGTCGACTCTTCA 6973349 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| || ||||| | || || || | | Sbjct 6973779 ATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6973720 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| ||| |||| ||||| || || || || | || ||| Sbjct 6973719 GACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAG 6973660 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||| | || || |||||||| || || | ||||| ||| || |||||| Sbjct 6973659 CAGAGACTCATATTTGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAAC 6973600 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| |||||| | || || ||||| ||| Sbjct 6973599 ATCCAAAAGGAGTCTACCCTCCATCTTGTG 6973570 >seq1 Length=30427671 Score = 102 bits (112), Expect = 8e-17 Identities = 154/216 (71%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || ||||| || || || ||||| | || || || | | Sbjct 24277047 ATGCAGATATTTGTGAAGACCCTCACTGGAAAGACAATCACTTTGGAGGTTGAGAGCTCA 24276988 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || |||| ||||| || || ||||| | ||||| Sbjct 24276987 GACACCATCGATAACG-TGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCA 24276929 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||||||| ||| || |||||||| || || | ||||| || ||| || Sbjct 24276928 ACAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCTGAC---AA 24276872 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | ||||| || || |||||||| Sbjct 24276871 TATCCAGAAGGAGTCTACGCTTCACCTTGTGTTGCG 24276836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||||||||| ||| | || || || | | Sbjct 20549761 ATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCT 20549820 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | || |||| || |||| |||||||| || ||||| | ||||| Sbjct 20549821 GATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCAA 20549880 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| || || || ||||| || || | || || || || |||||| Sbjct 20549881 CAGAGACTCATCTTTGCAGGAAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTACAAC 20549940 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| | || || || || ||| |||| Sbjct 20549941 ATCCAAAAGGAGTCAACACTTCACCTTGTGCTGCG 20549975 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| || ||||| || || || ||| | || || ||| | Sbjct 8314937 AAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAATCA 8314996 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | || | || || | ||||| || || ||||| |||| Sbjct 8314997 TCAGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGAT 8315056 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||||| | |||| ||| || ||||| |||| || | | || || || ||| Sbjct 8315057 CAGCAACGGTTGATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTAGCTGATTAC 8315116 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| ||| | ||||| ||| | || | || |||| || || Sbjct 8315117 AACATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGG 8315166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || | ||||| || |||||||| | || || ||| | | Sbjct 20549989 ATGCAGATTTTCGTAAAGACTTTGACGGGAAAGACCATCACGCTTGAAGTGGAAAGCTCT 20550048 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || || | | |||| ||| |||| |||||||| || || | | ||||| Sbjct 20550049 GATACGATTGACAATG-TGAAGGCAAAGATTCAGGACAAAGAAGGGATTTCACCAGACCA 20550107 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||||||| || ||||| |||| || || | ||||| | || ||||| Sbjct 20550108 ACAGAGACTCATCTTTGCAGGCAAGCAGCATGAAGATGGTCGCACTTTAGCGGATTACAA 20550167 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| ||| | || || || || || Sbjct 20550168 CATCCAGAAAGAGTCAACTCTTCACCTTGT 20550197 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || || || || || ||||||| ||| | || || || || Sbjct 20549305 ATGCAGATATTCGTCAAGACCCTTACCGGTTAAACCATTACCCTAGAAGTTGAGAGTACA 20549364 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | || | || || | ||||| || || ||||| |||| || Sbjct 20549365 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCAA 20549424 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| || | |||||| |||||||| || || | ||||| || || |||||| Sbjct 20549425 CAGAGACTAATATTCGCGGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACAAC 20549484 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| | || || || || ||| || Sbjct 20549485 ATCCAAAAGGAGTCAACACTTCACCTTGTGCTG 20549517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219154918320