Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=19698289 Score = 104 bits (114), Expect = 2e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 |||||||| || | | || ||||| || |||||||| | |||| ||||| || | | Sbjct 7082304 TGAGCATCCCCAAGAACATGGATAAAATCACCAGGAACAAGATCACACACATGAGCCAGC 7082363 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 || ||||| | ||||| || |||||||||||| ||||| || || |||||||| ||| Sbjct 7082364 ATGCAAGTAAGAAGAGAGTAAGAAGCAATGTTAAACGGCACACCAAGGCCCATATCTGCT 7082423 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 || | ||||| | ||||| || || | || || |||||||||||| Sbjct 7082424 GAACGCTGATACATTTGACATGAGAGTTCCCCTTCTGCCACATAAAACTG 7082473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783970414990