Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4 143 2e-29 seq5 134 1e-26 seq1 125 6e-24 seq2 95.1 1e-14 seq3 91.5 1e-13 >seq4 Length=18585056 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||| || || |||||||| ||| || ||| || |||||| Sbjct 2588296 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCA 2588355 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| |||||||||||||||| || ||||| ||||| |||||||| Sbjct 2588356 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 2588415 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | |||||| || || | || | || || Sbjct 2588416 ATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTT 2588475 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| ||| ||||| || |||||||| Sbjct 2588476 CCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | || | ||||||||| | |||||||| || || |||||||| ||| Sbjct 1278753 ACCACCACGGAGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGC 1278812 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || |||||| ||||||||||||||| |||||||||||||||| || ||||| Sbjct 1278813 CAAAGTACGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 1278872 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | || | |||||| | |||||| || Sbjct 1278873 GATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAAC 1278932 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || || || ||||| || || ||||||||||| Sbjct 1278933 TTCAAGAGTAATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||| || || |||||||| ||| || ||| || |||||| Sbjct 2719907 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCA 2719848 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| |||||||||||||||| || ||||| || || |||||||| Sbjct 2719847 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGG 2719788 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||| || || || | ||| | || || Sbjct 2719787 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCAAGGGTGATGGTCTTT 2719728 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| ||| || || || |||||||| Sbjct 2719727 CCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || || || || |||||||| || || || |||||| Sbjct 1279456 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 1279515 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||||||||| ||| | || || | ||||||||| ||||| ||||| ||||| || Sbjct 1279516 AGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGG 1279575 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| |||||| | ||| || ||||||| ||| | || || Sbjct 1279576 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 1279635 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || ||||| |||||||| Sbjct 1279636 CCGGTGAGAGTCTTAACAAAGATCTGCAT 1279664 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | ||| |||||||||| ||| ||||| || ||||||||||| ||| Sbjct 2719243 TACCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGG 2719184 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | ||| || || |||||||| ||| |||| | | |||||| || |||| Sbjct 2719183 CCAAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAG 2719124 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| |||||| || || ||| || | || | |||||| | ||||| | Sbjct 2719123 GAATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCA 2719064 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | ||||| || |||| || || || ||||||||||| Sbjct 2719063 CCTCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || || || || |||||||| || || || |||||| Sbjct 2718767 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 2718708 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | || || | ||||||||| ||||| ||||||||||| || Sbjct 2718707 AGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGG 2718648 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| |||||| | ||| || ||||||| ||| | || || Sbjct 2718647 ATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTT 2718588 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || ||||| |||||||| Sbjct 2718587 CCGGTGAGAGTCTTAACAAAGATCTGCAT 2718559 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | |||||||||||| | ||||||||| || ||||||||||| || Sbjct 1278980 TACCTCCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAG 1279039 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | ||| || || |||||||| ||| |||| | | |||||| || || | Sbjct 1279040 CCAAAGTTCTACCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTG 1279099 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| ||||| || || ||| || | |||| ||||| | |||||| | Sbjct 1279100 GGATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCCA 1279159 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || |||| || || ||||| |||||||| Sbjct 1279160 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | ||| ||||| || | |||||||| || || ||||||||||| Sbjct 2588504 TACCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCG 2588563 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | ||||| || || ||||| ||| |||| | | |||||| || |||| Sbjct 2588564 CCAAAGTTCTGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 2588623 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||| ||| || || || || | || | |||||| | |||||| | Sbjct 2588624 GAATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCA 2588683 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | ||| || || || || ||||| || ||||||||||| Sbjct 2588684 CCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | |||||||||||| | || ||||| || || ||||||||||| Sbjct 2719699 TACCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 2719640 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| || |||||| | |||||||| || |||| | | |||||| || |||| Sbjct 2719639 CCAAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAG 2719580 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| || || || || || | || | |||||| | |||||| | Sbjct 2719579 GGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTA 2719520 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||| ||||| || || || |||||||| Sbjct 2719519 CCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | ||| |||||||| | ||| ||||| || ||||||||||| || Sbjct 2719471 TACCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTCAG 2719412 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | ||| || || || ||||| ||| |||| | | |||||| || || | Sbjct 2719411 CCAAAGTTCTTCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTG 2719352 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| ||||| || || ||| || | || | |||||| | ||||| | Sbjct 2719351 GGATACCCTCTTTGTCCTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCA 2719292 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||| ||||| || || || |||||||| Sbjct 2719291 CCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||| ||||| || || |||||||| || | ||| | |||||| | Sbjct 1279229 CAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCCA 1279288 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||| ||||||||| |||| | | |||||| || ||||| || |||||||||||| | Sbjct 1279289 ACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGA 1279348 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| |||||| | ||||| ||||| | || | ||| || | Sbjct 1279349 TCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTC 1279408 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || || || ||||||||||| Sbjct 1279409 CCGTTAAGGTCTTGACGAAAATCTGCAT 1279436 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| || | ||| | |||||| | ||| ||||| Sbjct 2718983 GTGGACTCCTTCTGGATATTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTGCTTTCCG 2718924 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || | |||||| || ||||| || ||||| |||||| || || || Sbjct 2718923 GCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTGGCCTTG 2718864 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||||| ||||| | || | ||| || || || || ||| Sbjct 2718863 ACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTT 2718804 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||||||||| Sbjct 2718803 TTAACGAAAATCTGCAT 2718787 >seq5 Length=26975502 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||| || | |||||||||| ||| || ||||| || ||||||||||| Sbjct 6974235 TACCACCTCTTAACCTGAGAACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAATCAG 6974294 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||| || ||||| || |||||| |||| | | ||||| || |||| Sbjct 6974295 CCAAGGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGAG 6974354 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| || ||| ||||| | |||| |||||| | |||||| | Sbjct 6974355 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAA 6974414 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || || || || ||||| || ||||| ||||| Sbjct 6974415 CCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6974463 Score = 131 bits (144), Expect = 1e-25 Identities = 158/211 (75%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGT--ATCCT 118587 |||| |||| |||||||| ||||| ||||||||||| || |||| |||| ||| | Sbjct 6973572 CAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGC---GAGTGTGCGTCCATCTT 6973628 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | |||||||||||||| | ||||| | ||||||||| || || || || ||||||||| Sbjct 6973629 CAAGCTGTTTTCCAGCAAATATGAGTCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTT 6973688 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| ||| || || | |||| ||||| | |||||| ||||| | || | || | Sbjct 6973689 GAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCT 6973748 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | || || |||||||||||||| Sbjct 6973749 TGCCAGTTAAGGTCTTCACAAAAATCTGCAT 6973779 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || || ||||| ||||||||||||||| || || || ||| || Sbjct 772688 ACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGGCCATCTTCT 772747 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| | || | | |||||||| ||||| ||||| |||||||| | Sbjct 772748 AGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGA 772807 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| ||||| | |||| |||||| | |||||| ||||||| || | || ||| Sbjct 772808 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATAGTCTTG 772867 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| || || || ||||| Sbjct 772868 CCAGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || ||||||||||| ||||||||||| | |||||| |||||| Sbjct 6973798 CACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCAAGAGTGCGACCATCCTC 6973857 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| || | |||||| || || || || ||||| || ||| Sbjct 6973858 TAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTG 6973917 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||| || | || | |||||| | |||||| ||||| | ||| | ||||| Sbjct 6973918 GATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTTTT 6973977 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||| || ||||| || ||||| Sbjct 6973978 ACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||||||||| | ||||| |||||| Sbjct 772004 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGTGTGCGACCATCCTCA 772063 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||||||||||||| ||||||| | ||| || || || || || || |||||||| | Sbjct 772064 AGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 772123 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| || ||||| | || | || || Sbjct 772124 ATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTTTCAACCTCCAGAGTAATGGTCTTT 772183 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || ||||| |||||||| Sbjct 772184 CCGGTAAGGGTCTTCACAAAGATCTGCAT 772212 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || ||||| || ||||||||||| | |||||| ||| || Sbjct 14953308 ACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGACCATCGTCA 14953367 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| ||||| |||| || | ||| ||||| ||||| | || ||||||||| Sbjct 14953368 AGCTGTTTACCAGCAAAGATTAGTCTCTGTTGATCCGGAGGGACTCCTTCCTTGTCTTGG 14953427 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || |||||| | || | ||||| | ||||| || || | ||| | ||||| Sbjct 14953428 ATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACTTCAAGGGTAATGGTTTTA 14953487 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || ||||| |||||||| Sbjct 14953488 CCGGTAAGCGTCTTGACAAATATCTGCAT 14953516 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||||||||| | ||| || |||||| Sbjct 6973343 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTCA 6973402 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| ||||||| | ||| || || || || || || |||||||| | Sbjct 6973403 AGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGA 6973462 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| | |||||| ||||| | || | ||||| Sbjct 6973463 ATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCAAGAGTAATGGTTTTT 6973522 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || ||||| |||||||| Sbjct 6973523 CCGGTAAGGGTCTTCACAAATATCTGCAT 6973551 Score = 105 bits (116), Expect = 6e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||| ||||| ||||| ||||||||||| | ||||| ||| |||| Sbjct 772233 CAAGATGAAGTGTCGACTCCTTTTGGATGTTGTAATCTGCAAGGGTGCGTCCATCTTCGA 772292 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || || |||| || | ||||||||| ||||| || ||||| || ||| | Sbjct 772293 GCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCTTTATCTTGGA 772352 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || ||| || | || | |||||| | ||||| ||||| | ||| | ||||| | Sbjct 772353 TCTTAGCTTTGACATTGTCAATGGTGTCTGAACTCTCAACCTCAAGGGTGATTGTTTTAC 772412 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || ||||| || ||||| Sbjct 772413 CAGTGAGGGTCTTGACAAAGATTTGCAT 772440 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || ||||| |||||||||||||| || | ||| | || || Sbjct 772459 CACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCAAGAGTTCTTCCGTCTTC 772518 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| || | ||||||||| ||||| || || |||||||| Sbjct 772519 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTG 772578 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || ||| ||| || | || | ||||| | |||||| ||||| | || | || || Sbjct 772579 GATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAAAGTAATGGTCTT 772638 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||||||| || ||||| || ||||| Sbjct 772639 GCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668 >seq1 Length=30427671 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | ||||| ||| | ||| | ||| ||||| ||||| ||||||||||| Sbjct 20549531 CCACCACGGAGTCTCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCA 20549472 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||| |||||||| || ||| | || || | ||| ||||| ||||| Sbjct 20549471 AGAGTGCGACCATCCTCAAGCTGTTTACCCGCGAATATTAGTCTCTGTTGATCCGGAGGG 20549412 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||||||| || || |||||| | || | ||||| || ||||| || Sbjct 20549411 ATTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGTACTCTCAACT 20549352 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | |||| ||||| || || || || || |||||||| Sbjct 20549351 TCTAGGGTAATGGTTTAACCGGTAAGGGTCTTGACGAATATCTGCAT 20549305 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | ||| | ||||||||||| || ||||||||||| Sbjct 24276594 TACCACCACGAAGACGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 24276653 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | ||||||||||||||| ||||| ||||||| | ||| || || || | Sbjct 24276654 CCAAAGTCCTTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTG 24276713 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || | ||||| || ||| || ||| || | || | ||||| | |||||| | Sbjct 24276714 GGATCCATTCCTTATCCTGAATCTTAGCTTTGACATTATCAATTGTGTCTGAGCTCTCAA 24276773 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || ||||| |||| |||||| ||||| || ||||| Sbjct 24276774 CCTCCAAGGTAATGGTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||| | ||| ||||| ||||| ||||||||||| | ||| || ||| Sbjct 20549973 CAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGACCATC 20549914 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 |||||||| ||||| || ||||||| | ||| || || || || || || || ||||| Sbjct 20549913 TTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTC 20549854 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| || || | | |||| || || | |||||| || || | ||| | || Sbjct 20549853 CTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACTTCTAGGGTAATGGT 20549794 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || ||||||||||| Sbjct 20549793 TTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761 Score = 102 bits (112), Expect = 7e-17 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 ||||||||||||| |||||| ||||||| | ||| || || || || || |||||||||| Sbjct 24276441 CCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCCTCCTTGT 24276500 Query 118645 -CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 |||| || || || || | |||| ||| | | |||||| ||||| | ||| | Sbjct 24276501 CCTGT-ATCTTAGCCTTGACGTTATCGATTGTGCCTGAGCTCTCAACCTCCAAGGTAATT 24276559 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||| |||||| ||||| || ||||| Sbjct 24276560 GTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276594 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||||| ||||| ||||||||||| | ||||| || || Sbjct 24277066 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGACCGTCTTC 24277125 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| || | ||||||||| ||||| || || ||||| || Sbjct 24277126 AAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 24277185 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||||| | || | || || | || || ||||| | || | ||||| Sbjct 24277186 GATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTT 24277245 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||| ||| || |||||||||||||| Sbjct 24277246 GCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGT--ATCC 118586 ||||| || | || |||||||| || ||||||||||| || ||||| | | ||| Sbjct 8315148 ACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGC---TAGTGTTCTTCCATCT 8315092 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || | |||||||| ||| |||| | || |||||||| || || || || ||||||||| Sbjct 8315091 TCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCT 8315032 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGT 118705 || || ||| || | |||| ||||| | || | || ||||| | ||| | || Sbjct 8315031 TGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGAT-TCTACCTCTAAGGTTATTGT 8314973 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||| || || |||||||| Sbjct 8314972 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 8314940 >seq2 Length=19698289 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||||||| | || || || |||||||| ||||| Sbjct 19344897 GTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCG 19344838 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | |||||||| || || || || || ||||||||| || || || Sbjct 19344837 GCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG 19344778 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | | ||||||||||| || | ||| || || || || ||| Sbjct 19344777 ACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTT 19344718 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 19344717 TTCACGAAGATCTGCAT 19344701 >seq3 Length=23459830 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || |||| |||||||||| || |||||||| || ||||||||||| Sbjct 3005772 TACCACCTCTCAACCTCAGAACCAAGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAG 3005831 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | ||||||||||||||| ||||| |||| || || ||||| || || Sbjct 3005832 CCAAGGTAAGGCCATCCTCGAGCTGTTTACCAGCAAAGATAAGTCGTTGCTGGTCTAAAG 3005891 Query 118630 GTATGCCCTCCTTGT 118644 | ||||| ||||||| Sbjct 3005892 GAATGCCTTCCTTGT 3005906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830362988844