Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 1e-12
>seq2
Length=19698289
Score = 89.7 bits (98), Expect = 1e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
||||| || || |||| ||||| || ||||| || |||| |||||| ||| | ||| |
Sbjct 9294305 GATTTTGAATATGATTACTTTGGATTTAAAACTCTTGAGAGATCGTACCTCTTGAAAGTC 9294364
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
| || | | || ||| | ||| |||||| ||||| | || ||||| ||||| |||
Sbjct 9294365 CAAGGGACTGTTGTTGAAAGGCCTCAACACATGCTGATGAGGGTTGCTGTTGGGATCCAC 9294424
Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988
|||||||| || || |||| || | || ||| ||| | | | ||| | ||
Sbjct 9294425 AAGGATGATATTGATTCCGTGATCCAAACCTACCATTTGATGTCTCAGAGATGGTTCACT 9294484
Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020
||||| | || || ||||||||||| || ||
Sbjct 9294485 CATGCATCTCCTACTCTCTTCAACGCAGGAAC 9294516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766303696576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |