Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 1e-12 >seq2 Length=19698289 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || || |||| ||||| || ||||| || |||| |||||| ||| | ||| | Sbjct 9294305 GATTTTGAATATGATTACTTTGGATTTAAAACTCTTGAGAGATCGTACCTCTTGAAAGTC 9294364 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || | | || ||| | ||| |||||| ||||| | || ||||| ||||| ||| Sbjct 9294365 CAAGGGACTGTTGTTGAAAGGCCTCAACACATGCTGATGAGGGTTGCTGTTGGGATCCAC 9294424 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 |||||||| || || |||| || | || ||| ||| | | | ||| | || Sbjct 9294425 AAGGATGATATTGATTCCGTGATCCAAACCTACCATTTGATGTCTCAGAGATGGTTCACT 9294484 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 ||||| | || || ||||||||||| || || Sbjct 9294485 CATGCATCTCCTACTCTCTTCAACGCAGGAAC 9294516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766303696576