Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 179 3e-40 seq3 138 1e-27 seq4 102 7e-17 seq1 100 3e-16 seq2 86.0 6e-12 >seq5 Length=26975502 Score = 179 bits (198), Expect = 3e-40 Identities = 397/587 (68%), Gaps = 20/587 (3%) Strand=Plus/Plus Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605 ||||| || || |||| ||| | |||||| | |||||||| || || |||||||| || Sbjct 16408220 ATGTTCCCAATCCAATACCCACAGATTTGGGAGATGTACAAGAAAGCCGAAGCATCCTTC 16408279 Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT---TCCCT---C 57659 ||||| | ||||||||| || || ||| | || |||| ||||| || || | Sbjct 16408280 TGGACAGCCGAAGAAGTCGATCTCTCTCAAGACAATCGCGACTGGGAAAACTCACTAACC 16408339 Query 57660 AAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGT 57719 || || || | | || ||||||||||| | || || ||||||||||| || || Sbjct 16408340 AACGAC---GAACGTCACTTCATTAAACACGTCCTCGCCTTCTTCGCCGCATCAGACGGA 16408396 Query 57720 ATTGTTAACGAGAATTTGGTCGAA-AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAG 57778 || ||| ||||||| | || | ||||| || || || | | || || | Sbjct 16408397 ATCGTTCTCGAGAATCTC-TCAACTAGATTCATGTCCGATGTTCAGATCTCAGAAGCTCG 16408455 Query 57779 ATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACT 57838 ||| |||||||| ||| | || ||||| || | || || || |||||| || || Sbjct 16408456 TGCCTTCTACGGATTCCAAATCGCGATTGAGAATATTCACTCCGAGATGTATAGTCTCCT 16408515 Query 57839 CATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898 |||| ||||| | || |||||| | |||| | | || || || |||||||| Sbjct 16408516 TCTCGACACGTATATCAAAGACAACAAAGAGAGAGATCATCTTTTTCGTGCAATCGAAAC 16408575 Query 57899 AATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC-CACG 57956 || || | || | || || ||||| ||| | || |||||||| || | | || Sbjct 16408576 CATTCCTTGTGA---CGAAAAAAGCAGAATGGGCTATGAAATGGATCAACGGATCTCAAA 16408632 Query 57957 GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGC 58016 || ||||| ||||| | | ||||| || ||| |||||||||||||| || || Sbjct 16408633 GC----TTCGCTGAGAGAATCGTAGCGTTTGCTTGCGTTGAAGGTATATTCTTCTCCGGT 16408688 Query 58017 AGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGC 58076 |||||| | ||||| ||| |||||||||| || | ||||| || || || ||| Sbjct 16408689 AGCTTTTGTTCGATATTCTGGTTGAAGAAACGAGGTTTAATGCCTGGACTCACTTTTTCA 16408748 Query 58077 AACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTG 58123 ||||| ||||| ||| | ||||| ||||| || |||||| || || Sbjct 16408749 AACGAATTGATTTCGAGAGACGAAGGTCTTCACTGTGATTTCGCTTG 16408795 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||||||||| ||||| || || || | || ||||| || Sbjct 772668 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 772609 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | |||||| || ||| | |||||||||||| | || || || || Sbjct 772608 GACACTATTGACAACGTCAAAGCAAAGA-TCCAGGACAAGGAAGGAATCCCTCCGGATCA 772550 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || || || || ||| | |||||| | ||| | || || || Sbjct 772549 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAA 772490 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||| || ||||| |||||| |||| ||| | || || || |||| Sbjct 772489 CATTCAAAAGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTA 772440 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || || || || ||||| || ||||| |||| ||||| || Sbjct 772896 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTCT 772837 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | ||||||||||||| | || || || || Sbjct 772836 GACACCATCGACAATGTTAAGGCAAAGATTCA-GGACAAGGAAGGCATTCCTCCGGATCA 772778 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | |||||||||| || |||||| | ||||| || || |||||| || Sbjct 772777 GCAAAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAA 772718 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| |||||||| || |||||| |||| || Sbjct 772717 CATTCAGAAAGAATCAACCCTTCATTTGGTTCT 772685 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||||||||| |||||||| || ||| | || |||||| || Sbjct 6974235 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCT 6974176 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| || ||| | |||||||||||| | || || ||||| Sbjct 6974175 GACACTATTGACAACGTCAAGGCAAAGA-TCCAGGACAAGGAAGGAATCCCTCCGGACCA 6974117 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || |||||||| || ||| | ||||| | |||| | || || || Sbjct 6974116 GCAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAA 6974057 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || |||||||| || || ||| | || | || |||| Sbjct 6974056 TATCCAAAAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 6974007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||||||||| || ||||| |||||| | || ||||| || Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || || || || || | || || |||||| Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6973888 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || ||| | || || | ||| | ||||| ||| Sbjct 6973887 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 6973828 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| || || |||||| |||| ||| | ||||| || |||| Sbjct 6973827 ATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTA 6973779 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || || ||||| || ||| | || ||||| || Sbjct 14953516 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 14953457 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || ||| | || ||||||||||| || || || || || Sbjct 14953456 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAA 14953397 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | ||||| || ||||| |||||| | || || | ||| | ||||| ||| Sbjct 14953396 CAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAAC 14953337 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| ||||| || |||| || || |||| || |||| Sbjct 14953336 ATCCAGAAAGAATCAACTCTCCACTTGGTTCTCAGGTTGAGAGGTGGTA 14953288 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || || || || || || ||||| |||| ||||| || Sbjct 6974463 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCT 6974404 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | ||||||||||||| | || || ||||| Sbjct 6974403 GACACCATCGACAATGTTAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCTCCTGACCA 6974345 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | | || |||||||| || ||| | ||||| || || ||||| || Sbjct 6974344 GCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAA 6974285 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || |||||||| || || || |||| || || | || || |||| Sbjct 6974284 CATCCAGAAAGAATCAACACTCCACTTGGTTCTCAGGTTAAGAGGTGGTA 6974235 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| | || ||||| || ||||| | || ||||| || Sbjct 6973779 ATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6973720 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | | |||||||||| | || || || || Sbjct 6973719 GACACAATCGATAATGTCAAGGCAAAGATTCAAG-ACAAGGAAGGGATTCCACCAGATCA 6973661 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 |||| | || ||||| ||||| |||||| | ||||| | | | || | ||||| | Sbjct 6973660 GCAGAGACTCATATTTGCTGGAAAACAGCTTGAAGA-TGGACGCACACTCGCTGATTACA 6973602 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| ||||| || || || || ||||| || ||| | || | || |||| Sbjct 6973601 ACATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTA 6973551 >seq3 Length=23459830 Score = 138 bits (152), Expect = 1e-27 Identities = 322/476 (68%), Gaps = 20/476 (4%) Strand=Plus/Minus Query 57537 AGATT-TGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGA 57595 ||||| ||| ||||| || ||| | || ||| | || ||| | ||||||||||| || || Sbjct 9981012 AGATTCTGT-ATGTTCCCAATTCACTACCCACAGATCTGGGAAATGTACAAAAAAGCCGA 9980954 Query 57596 AGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC 57655 |||||| || ||||||| |||||||||||| || || | || |||| ||||| Sbjct 9980953 AGCATCATTCTGGACCGCCGAAGAAGTAGATCTATCACAAGACAACCGCGACTGGGAAAA 9980894 Query 57656 C---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712 | ||||| || ||| | | || || |||||||| | || || ||||| ||||| Sbjct 9980893 CAGTCTCAACGACGGTGAACGTCACTTCATCAAACACGTCCTCGCTTTCTTCGCTGCATC 9980834 Query 57713 CGATGGTATTGTTAACGAGAATTTGG----TCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 || || || || |||||| | | ||| || | | || || ||||| Sbjct 9980833 TGACGGAATCGTACTAGAGAATCTCGCTTCTCGCTTCATGTCC----GATGTTCAAGTCT 9980778 Query 57769 CGGAGGCGAGATGCTTT-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | |||||| | |||||| ||||| || || | || ||||||||| | || || || ||| Sbjct 9980777 CTGAGGCGCG-TGCTTTCTACGGTTTCCAGATCGCGATTGAAAACATCCACTCGGAGATG 9980719 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAAC 57887 ||| || || ||||||| || | || || ||| | |||| | | || || Sbjct 9980718 TATAGTCTCCTTCTCGATACTTATATCAAAGATAACAAAGAGAGAGATCATCTCTTTCGT 9980659 Query 57888 GCGATCGAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 || || |||||||| || ||| |||||||||| || | ||| | || |||||||| | Sbjct 9980658 GCCATTGAAACAATCCCTTGCG-TCGCCAAGAAAGCTCAATGGGCTATGAAATGGATCGA 9980600 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTA 58002 || | || |||||||| | | ||||| ||||| ||||||||||| Sbjct 9980599 ---CGGTTCTCAGACTTTCGCCGAACGAATCATCGCTTTCGCTTGCGTCGAAGGTA 9980547 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || || ||| | || |||||| | Sbjct 23037134 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTTGAATC 23037193 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | || || || || ||||||||||| | || || || Sbjct 23037194 ATCCGACACCATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGA 23037253 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| | || ||||| || |||||| | |||||| || | ||| || Sbjct 23037254 CCAGCAGCGATTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACCCTCGCCGACTA 23037313 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||| |||||||| || || Sbjct 23037314 CAACATCCAGAAGGAATCGACGCTTCATCTCGTCCT 23037349 >seq4 Length=18585056 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||||||| |||| || || || ||||| | || ||||| ||| Sbjct 2588504 ATGCAGATCTTCGTAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCC 2588445 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||||||||||| | || || |||||| Sbjct 2588444 GACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 2588385 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| | || || | | | ||| || ||| || || Sbjct 2588384 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGA-TGGACGTACTTTGGCCGACTACAA 2588326 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || |||||||| |||| || Sbjct 2588325 CATCCAGAAGGAGTCTACTCTTCACTTGGTCCT 2588293 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| | || || ||| ||| Sbjct 2719699 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCC 2719758 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||||||| | || || |||||| Sbjct 2719759 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 2719818 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| | || || | | | ||| || ||| || || Sbjct 2719819 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGA-TGGACGTACTTTGGCCGACTACAA 2719877 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || |||||||| |||| || Sbjct 2719878 CATCCAGAAGGAGTCTACTCTTCACTTGGTCCT 2719910 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || || || | || ||||| ||| Sbjct 1278980 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCC 1278921 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || |||||| Sbjct 1278920 GACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 1278861 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| |||||| | || || | ||| || ||| || ||| Sbjct 1278860 CAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAAC 1278801 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || || || || ||||| |||| || || || Sbjct 1278800 ATCCAGAAGGAGTCTACCCTTCACTTGGTGCTAAGGCT 1278763 >seq1 Length=30427671 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || || || || ||| | || || ||| | Sbjct 8314937 AAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAATCA 8314996 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || ||| || || ||||||||||| | || || || Sbjct 8314997 TCAGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGAT 8315056 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTA 31368 ||||| || | || ||||| || ||||| |||||||| | | || | ||| ||||| Sbjct 8315057 CAGCAACGGTTGATCTTCGCCGGAAAACAATTGGAAGA-TGGAAGAACACTAGCTGATTA 8315115 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| || ||||| ||||| |||||| |||| || | ||||| || ||| Sbjct 8315116 CAACATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGGT 8315167 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| ||||||||||||| ||||| | || |||||| || Sbjct 24277275 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 24277216 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || || | || ||| |||||||| | || || || ||| Sbjct 24277215 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 24277156 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || ||| | |||||| | || | ||||| ||| Sbjct 24277155 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 24277096 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || || ||| |||| ||| | || || || |||| Sbjct 24277095 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTA 24277047 >seq2 Length=19698289 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || |||||||| |||| || || | Sbjct 19344697 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAGTC 19344756 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | ||||| | || ||||||||||| | || || || Sbjct 19344757 CTCTGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGA 19344816 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGAC-TA--TGAG-CG 31364 ||||||||| | || ||||| || || ||| | |||||| ||| || | || || Sbjct 19344817 CCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGAC----GGACGTACCTTAGCCG 19344872 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||| ||||| || || ||||| || ||||| || || ||| Sbjct 19344873 ATTACAACATCCAGAAGGAATCAACGCTTCACCTTGTCCTT 19344913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766360995440