Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 145 2e-29 >seq4 Length=18585056 Score = 145 bits (160), Expect = 2e-29 Identities = 153/198 (77%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 35518 AGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACC 35576 |||| ||||| |||||| || |||| || ||| | || ||||||||| |||||| | | Sbjct 16511770 AGAACAATCCTGATGATCGACGGATTATAATGTCAGCTTGGAATCCTTCTGATCTTAAGC 16511711 Query 35577 TTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGT 35636 | ||||| |||||||||||||||||| ||| || |||||||| || ||||||||| | | Sbjct 16511710 TGATGGCACTTCCTCCATGCCACATGTTTGCACAGTTTTATGTTGCAAATGGAGAACTTT 16511651 Query 35637 CGTGCCAGTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 | || || |||||||||| ||| || ||| || | ||||| || || || ||||| Sbjct 16511650 CATGTCAAATGTATCAGCGTTCAGCCGATATG--GGTCTCGGCGTACCGTTTAACATTGC 16511593 Query 35695 ATCATACTCTCTTCTGAC 35712 |||||||| ||||| || Sbjct 16511592 CTCATACTCCCTTCTTAC 16511575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583911246685