Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=18585056 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 20999 GACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAG 21058 ||||||||| | | | || || |||| ||| ||| ||||||||||| || ||||| Sbjct 16511556 GACGTGAGCAAGAATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAACGGTACGCCGAG 16511615 Query 21059 GCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAA 21118 ||||| ||||| || | ||| |||| || || || || || || || || ||||| Sbjct 16511616 ACCCATATCGGCTGAACGCTGATACATTTGACATGAAAGTTCTCCATTTGCAACATAAAA 16511675 Query 21119 CTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGC 21178 ||| || | ||| || ||||| || |||||| || || || | || ||||| || Sbjct 16511676 CTGTGCAAACATGTGGCATGGAGGAAGTGCCATCAGCTTAAGATCAGAAGGATTCCAAGC 16511735 Query 21179 GCACATAACGATGCGCCGATC 21199 |||| | || || ||||| Sbjct 16511736 TGACATTATAATCCGTCGATC 16511756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775963505360