Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 9e-12 >seq4 Length=18585056 Score = 86.0 bits (94), Expect = 9e-12 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244 |||||| |||||| ||| | |||| |||||| | ||||||||| | ||| | Sbjct 16511773 TCAAGAACAATCCTGATGATCGACGGATTATAATGTCAGCTTGGAATCCTTCTGATCTTA 16511714 Query 70245 ACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTAC-TCGTACGATGGCAA 70302 | | |||||||| || || || ||| |||||| | |||||||| | | | |||| | Sbjct 16511713 AGCTGATGGCACTTCCTCCATGCCACATGTTTG-CACAGTTTTATGTTGCAA-ATGGAGA 16511656 Query 70303 ATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362 | | ||||| |||||||||| | ||||| ||||| ||||| ||||| |||||||| Sbjct 16511655 ACTTTCATGTCAAATGTATCAGCGTTCAGCCGATATGGGTCTCGGCGTACCGTTTAACAT 16511596 Query 70363 TGC 70365 ||| Sbjct 16511595 TGC 16511593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059135157320