Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5 165 2e-35 seq1 140 7e-28 seq4 136 9e-27 seq2 123 6e-23 seq3 114 3e-20 >seq5 Length=26975502 Score = 165 bits (182), Expect = 2e-35 Identities = 418/615 (68%), Gaps = 27/615 (4%) Strand=Plus/Plus Query 268694 CCAGATAGATT-TGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACA 268752 |||||| |||| ||| || || ||||| || | | || ||| ||||||||| | Sbjct 16408205 CCAGATCGATTCTGT-ATGTTCCCAATCCAATACCCACAGATTTGGGAGATGTACAAGAA 16408263 Query 268753 GGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAG--AT 268810 |||| || || || ||||| | |||||||| ||||| ||| | ||| ||| | | Sbjct 16408264 AGCCGAAGCATCCTTCTGGACAGCCGAAGAAGTCGATCTCTCTCAAGAC--AATCGCGAC 16408321 Query 268811 TGGAAAAATTTAA-AACCA--GAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTT 268867 ||| |||| | | ||||| || ||| | || || | | || || || || Sbjct 16408322 TGGGAAAACTCACTAACCAACGACGAACGTCACTTCATTAAACACGTCCTCGCCTTCTTC 16408381 Query 268868 GCAGTTAGTGATGGTATCGTTAACGAAAATCT----AGTAGAGAAGTTC-TGTCAAGAGG 268922 || | || || |||||| ||| ||||| | |||| ||| |||| || | Sbjct 16408382 GCCGCATCAGACGGAATCGTTCTCGAGAATCTCTCAACTAGA----TTCATGTCC-GATG 16408436 Query 268923 TACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATT 268982 | ||||| | ||||| | || ||||||||||| || || || || |||||||| | Sbjct 16408437 TTCAGATCTCAGAAGCTCGTGCCTTCTACGGATTCCAAATCGCGATTGAGAATATTCACT 16408496 Query 268983 CAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGAC 269042 | |||||||| ||||| | | || || ||||| | || ||||| || | || | | Sbjct 16408497 CCGAGATGTATAGTCTCCTTCTCGACACGTATATCAAAGACAACAAAGAGA-GAGATCAT 16408555 Query 269043 TATTTTCTT-CTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAA 269101 ||||| | | || ||| || || ||||| |||||| | ||||||||| ||||| Sbjct 16408556 CTTTTTCGTGCAATCGAAACCATTC-CT-TGTGACGAAAAAAGCAGAATGGGCTATGAAA 16408613 Query 269102 TGGATAAACG-ATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGG 269160 ||||| |||| || | ||| || || || | || || ||||| || ||||| Sbjct 16408614 TGGATCAACGGATCTCAAAGCTT-CGCTGAGAGAATCGTAGCGTTTGCTTGCGTTGAAGG 16408672 Query 269161 TATATTCTT-TTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGC 269219 ||||||||| | ||| |||||| | || || |||||||||||| |||| | |||| Sbjct 16408673 TATATTCTTCTCCGGTAGCTTTTG-TTCGATATTCTGGTTGAAGAAACGAGGTTTAATGC 16408731 Query 269220 CAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCG 269279 | ||| | ||||| || ||||||||||| || ||||||||| | ||||| || |||| Sbjct 16408732 CTGGACTCACTTTTTCAAACGAATTGATTTCGAGAGACGAAGGTCTTCACTGTGATTTCG 16408791 Query 269280 CTTGTTTATTATTTA 269294 ||||||| ||| || Sbjct 16408792 CTTGTTTGATATATA 16408806 Score = 149 bits (164), Expect = 1e-30 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || | ||| | || || || || ||||| || |||||| Sbjct 772439 ATACCACCTCTGAGACGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCA 772498 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | |||||||| |||||||| || || || || ||||| || || ||||| ||||| ||| Sbjct 772499 GCAAGAGTTCTTCCGTCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGA 772558 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || ||||| ||||||||||| || || || | || || || | || Sbjct 772559 GGGATTCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTGTCAATAGTGTC-AGAGCTCTC 772617 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 772618 AACCTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | ||| || || | || | || ||||||||||| || || || || Sbjct 14953287 ATACCACCTCTCAACCTGAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCT 14953346 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | ||| || || || ||||| |||||||| ||||| ||||||||||| ||| Sbjct 14953347 GCAAGAGTGCGACCATCGTCAAGCTGTTTACCAGCAAAGATTAGTCTCTGTTGATCCGGA 14953406 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || | |||||| || || || ||||| ||||| ||||| || | || || | || Sbjct 14953407 GGGACTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCA 14953466 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| ||||| || || |||||||||||||| Sbjct 14953467 ACTTCAAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 14953516 Score = 140 bits (154), Expect = 7e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | || || | ||| | || |||||||||||||| || || || Sbjct 772667 ATACCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCG 772726 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | || |||||||| ||||| || || || |||| || || ||||| ||| Sbjct 772727 GCCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGA 772786 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || |||||||||||||| || ||||| || | ||| || || | || Sbjct 772787 GGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTC-AGAGCTCTC 772845 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || |||||||| ||||| |||||||| || || || ||||| Sbjct 772846 AACCTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 140 bits (154), Expect = 7e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| ||| || || | || | ||| ||||||||||| || || || ||| Sbjct 6974234 ATACCACCTCTTAACCTGAGAACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAATCA 6974293 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | || |||||||| || || ||||| || || | || || || |||||| Sbjct 6974294 GCCAAGGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGA 6974353 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||| |||||||| || ||||| || | ||| || || | || Sbjct 6974354 GGAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTC-AGAGCTCTC 6974412 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||||||||| |||||||| || || || ||||| Sbjct 6974413 AACCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6974463 Score = 127 bits (140), Expect = 5e-24 Identities = 149/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || | || || | ||| || || || ||||||||| Sbjct 772016 GTCGACTCCTTCTGGATGTTGTAATCTGCAAGTGTGCGACCATCCTCAAGCTGTTTTCCA 772075 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || || || || ||||| || ||||||||||| || || Sbjct 772076 GCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTG 772135 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | ||| || ||| ||| ||||| || ||||| ||||| || ||||| Sbjct 772136 ACATTATCGATGGTGTCTGAGCT---TTCAACCTCCAGAGTAATGGTCTTTCCGGTAAGG 772192 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| |||||||| Sbjct 772193 GTCTTCACAAAGATCTGCAT 772212 Score = 127 bits (140), Expect = 5e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | ||||| || || || || || || |||| || || | || || Sbjct 6973567 AAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGTCCATC 6973626 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || |||||||||||||| || || ||||| ||||| || || || ||||| || || Sbjct 6973627 TTCAAGCTGTTTTCCAGCAAATATGAGTCTCTGCTGATCTGGTGGAATCCCTTCCTTGTC 6973686 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||| || ||||| || | || || || | || ||||| | || |||| Sbjct 6973687 TTGAATCTTTGCCTTGACATTATCGATTGTGTC-TGAGCTCTCAACCTCCAAAGTGATAG 6973745 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || ||||| |||||||| Sbjct 6973746 TCTTGCCAGTTAAGGTCTTCACAAAAATCTGCAT 6973779 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || | ||||| | ||| || || || || || ||| Sbjct 6973355 GTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTCAAGCTGCTTCCCA 6973414 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || || || || ||||| || ||||||||||| || || Sbjct 6973415 GCGAAGATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTG 6973474 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || ||||| || ||||| || || || ||||| || Sbjct 6973475 ACATTATCAATTGTGTC-TGAGCTCTCAACCTCAAGAGTAATGGTTTTTCCGGTAAGGGT 6973533 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 6973534 CTTCACAAATATCTGCAT 6973551 Score = 111 bits (122), Expect = 4e-19 Identities = 147/201 (73%), Gaps = 5/201 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA---CCGTCTTCTAGTTGTTTT 104419 || || |||||||| ||||| || || | || ||| | || ||||| || || | Sbjct 14952861 GTTGACTCTTTCTGGATATTGTAATCCGCTAAAGTGTAATAACCATCTTCAAGCTGCTCG 14952920 Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || ||||| |||||||||||||| || || | || | |||||| ||||||||||| || Sbjct 14952921 CCTGCAAAGATTAGCCTCTGTTGGTCCGGTTGGATCCTTTCTTTGTCCTGAATCTTGGCC 14952980 Query 104480 TTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538 || ||||| || | ||||| || | || || || ||||| || ||||| || || | Sbjct 14952981 TTCACATTGTCAATCGTATC-AGAGCTCTCCACTTCAAGTGTGATGGTCTTTCCCGTCAA 14953039 Query 104539 TGTTTTTACAAATATCTGCAT 104559 || || |||||||||||||| Sbjct 14953040 AGTGTTGACAAATATCTGCAT 14953060 >seq1 Length=30427671 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | || || | ||| | || || |||||||| || || || |||| | Sbjct 8315166 CCTCCTCTCAGACGTAGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCT 8315107 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || ||||| || ||||| | ||||||||| || || || | || || ||||| || || Sbjct 8315106 AGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGG 8315047 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| || || || ||||| ||||| ||||| || | || || | ||||||| Sbjct 8315046 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCTACC 8314987 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| || || ||||| || || || ||||| || || ||||||||||| Sbjct 8314986 TCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 8314937 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || || | ||| || || || || || || || || | ||||| | | Sbjct 20549522 AGTCTCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTGCGA 20549463 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||| || || || ||||| ||||||||||| ||||| |||||||| Sbjct 20549462 CCATCCTCAAGCTGTTTACCCGCGAATATTAGTCTCTGTTGATCCGGAGGGATTCCTTCC 20549403 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || ||||| ||||| ||||| || | || || || || || ||||| ||| Sbjct 20549402 TTGTCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGTACTCTCAACTTCTAGGGTA 20549343 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| ||||| || || || ||||||||||| Sbjct 20549342 ATGGTTTAACCGGTAAGGGTCTTGACGAATATCTGCAT 20549305 Score = 125 bits (138), Expect = 2e-23 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| || || | ||||| |||||||| || || || |||| | ||| || || || || Sbjct 24276613 TACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAAAGTCCTTCCATCCTC 24276672 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || ||||| |||||||| || || |||||||| || || || || | ||| |||||||| Sbjct 24276673 GAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCATTCCTTATCCTG 24276732 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCT 104528 |||||| ||||| ||||| || | || || || | || ||||| | ||||| |||| Sbjct 24276733 AATCTTAGCTTTGACATTATCAATTGTGTC-TGAGCTCTCAACCTCCAAGGTAATGGTCT 24276791 Query 104529 TACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || | ||||| ||||| || ||||| Sbjct 24276792 TGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822 Score = 118 bits (130), Expect = 2e-21 Identities = 147/198 (74%), Gaps = 5/198 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| ||||| ||||| || || | ||| || || || ||||| ||| Sbjct 24276854 GTAGACTCCTTCTGGATATT---GTCAGCAAGTGTGCGACCATCCTCAAGCTGTTTCCCA 24276910 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || || || || ||||| || ||||||||||| || || Sbjct 24276911 GCGAAGATGAGTCTCTGTTGGTCTGGTGGGATACCTTCCTTGTCCTGAATCTTAGCCTTC 24276970 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || | || ||||| | || || ||||| ||||| || || Sbjct 24276971 ACGTTATCGATGGTGTC-TGAGCTCTCAACCTCCAAAGTGATTGTCTTTCCAGTGAGGGT 24277029 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 24277030 CTTCACAAATATCTGCAT 24277047 Score = 116 bits (128), Expect = 9e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | ||| || || || || || || || || | ||||| | ||| ||| Sbjct 20549972 AGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGACCATCT 20549913 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||| ||||| || || |||||||| || || || || |||||||| ||| Sbjct 20549912 TCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTCC 20549853 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 |||||||| || || | || || | ||||| || | || || ||||| ||||| || Sbjct 20549852 TGAATCTTGGCCTTCAGGTTATCGATTGTATC-AGAGCTCTCAACTTCTAGGGTAATGGT 20549794 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || |||||||| Sbjct 20549793 TTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || || | || ||| | ||| ||||| | || || || Sbjct 20550185 GTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCATGCTGCTTGCCT 20550126 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || |||||||| || || | || |||||||| |||||||||||||| || Sbjct 20550125 GCAAAGATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGAATCTTTGCCTTC 20550066 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | ||||| ||| ||| || || || || || ||||| || || | Sbjct 20550065 ACATTGTCAATCGTATCAGAGCT---TTCCACTTCAAGCGTGATGGTCTTTCCCGTCAAA 20550009 Query 104540 GTTTTTACAAATATCTGCAT 104559 || ||||| || |||||||| Sbjct 20550008 GTCTTTACGAAAATCTGCAT 20549989 Score = 113 bits (124), Expect = 1e-19 Identities = 111/142 (78%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 104329 TATTCCC-CCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 || |||| || || ||||| | ||| | || | || |||||||||||||| || || | Sbjct 11218782 TAGTCCCACCCCTAAGCCTCAATACCAAGTGAAGAGTCGATTCTTTCTGAATGTTGTAAT 11218841 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 | | || |||||||| ||||| || || || |||||||| || | |||||||||||||| Sbjct 11218842 CCGCTAATGTTCTACCATCTTCAAGCTGCTTACCAGCAAATATCAACCTCTGTTGATCAG 11218901 Query 104448 GAGGTATTCCTTCTTTATCCTG 104469 | |||||||| ||||| ||||| Sbjct 11218902 GTGGTATTCCCTCTTTGTCCTG 11218923 >seq4 Length=18585056 Score = 136 bits (150), Expect = 9e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||| || |||||||| || ||||||| | ||||||||| ||||| ||||||||||| Sbjct 1279011 TGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTACCATCTTCAAGTTGTTTTCC 1279070 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 || || || | ||||| || || || || || || ||||| ||||| ||||| ||||| Sbjct 1279071 GGCGAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCCTGGATCTTGGCTTT 1279130 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 ||||| || | || || || | || ||||| | || |||||||| ||||| | | Sbjct 1279131 GACATTGTCGATAGTGTC-AGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCAGTCAACG 1279189 Query 104541 TTTTTACAAATATCTGCAT 104559 | || ||||| |||||||| Sbjct 1279190 TCTTGACAAAGATCTGCAT 1279208 Score = 118 bits (130), Expect = 2e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | ||||| || ||||| || || ||||| | | ||| | | Sbjct 1278763 AGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGA 1278822 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||||||||| || || || | ||| || || ||||| || ||||| Sbjct 1278823 CCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCC 1278882 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| || || || || || | ||| ||| || | || || || || || Sbjct 1278883 TTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCG-GAGCTCTCAACTTCAAGAGT 1278941 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| ||||| || || || || || |||||||| Sbjct 1278942 AATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| || || |||||||| || ||||| | | |||||| || ||||| ||||||||||| Sbjct 2719212 TGTGGACTCCTTCTGAATGTTGTAGTCGGCCAAAGTTCTGCCATCTTCAAGTTGTTTTCC 2719153 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 || || || | ||||| || || ||||| || || ||||| || || ||||| ||||| Sbjct 2719152 GGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTGGCTTT 2719093 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || | || ||||| | || ||||| || ||||| | || Sbjct 2719092 CACGTTATCAATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTTTTCCCAGTCAACGT 2719033 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 2719032 CTTAACGAAAATCTGCAT 2719015 >seq2 Length=19698289 Score = 123 bits (136), Expect = 6e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| ||||| ||||| || || ||||| | ||||| |||||||| || || || |||| Sbjct 14981527 TTCCACCTCTGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 14981468 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || || | || ||||| | ||| || ||||||||||| ||||||||||||||||| | Sbjct 14981467 CTAAGGTCCGGCCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTCTGTTGATCAGGTG 14981408 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 |||| || ||||| ||||||| Sbjct 14981407 GTATGCCCTCTTTGTCCTGAA 14981387 >seq3 Length=23459830 Score = 114 bits (126), Expect = 3e-20 Identities = 109/137 (80%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 269152 TGTAGAAGGTATATTCTTTTCGGGGT-CTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAG 269210 ||| |||||||| ||||| || || |||||| | ||||| ||| |||||||| ||| Sbjct 9980469 TGTTGAAGGTATCTTCTTCTCCGGAAGCTTTTGTT-CAATCTTCTGGCTGAAGAAACGAG 9980411 Query 269211 GCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACT 269270 | || ||||| |||||||| ||||| ||||||||||| | |||||||||||||||| Sbjct 9980410 GACTCATGCCTGGATTAACATTCTCAAACGAATTGATCTCACGTGACGAAGGTTTACACT 9980351 Query 269271 GCGACTTCGCTTGTTTA 269287 | || ||||||||| || Sbjct 9980350 GTGATTTCGCTTGTCTA 9980334 Score = 113 bits (124), Expect = 1e-19 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | ||| || |||||||| || || || || | ||||| | ||| || Sbjct 3005560 AAGGACAAGATGCAGTGTTGACTCTTTCTGGATGTTGTAATCGGCAAGAGTACGACCATC 3005619 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || ||||| || || ||||| || |||| | |||||||||||||| Sbjct 3005620 CTCGAGTTGCTTACCTGCAAAGATAAGTCTCTGCTGGCGAGGAAGGATTCCTTCTTTATC 3005679 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT-ACCTCTAGTGTAATAG 104525 || ||||| || || || || || | || || || || | ||||| || || || | Sbjct 3005680 TTGGATCTTGGCCTTGACGTTATCGATAGTGTC-TGAGCTTTTGACCTCAAGGGTTATGG 3005738 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || ||||| || | ||||| || ||||| Sbjct 3005739 TCTTTCCCGTAAGAGTCTGCACAAAGATTTGCAT 3005772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398296733956