Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq5 140 3e-28
seq4 131 2e-25
seq1 102 7e-17
seq2 96.9 3e-15
seq3 82.4 7e-11
>seq5
Length=26975502
Score = 140 bits (154), Expect = 3e-28
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || ||||| || || | ||||| || | || ||||| || || | ||| |
Sbjct 772662 TTTGCATACCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGT 772721
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
||||| || || | ||| || |||||||| ||| | || ||||||||||||||||
Sbjct 772722 AATCGGCCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGAT 772781
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| |||||||| ||||| ||||| | ||| |||||||| || | ||| ||||||| |
Sbjct 772782 CCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGC 772841
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||| || || ||||| || |||||||| ||||| |||||
Sbjct 772842 TCTCAACCTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896
Score = 123 bits (136), Expect = 2e-23
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || ||||| || | ||| ||||| || ||||| || |||||
Sbjct 772004 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG-CA-AGTGTGCGACCATCCT 772061
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||||||||| | ||||| | ||| || || ||||| || || ||||| ||||| |
Sbjct 772062 CAAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCT 772121
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| || |||||||| ||| ||||| | | || || || | || ||||| |
Sbjct 772122 GAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTTTCAACCTCCAGAGTAATGGTCT 772181
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || |||||||||||||||||
Sbjct 772182 TTCCGGTAAGGGTCTTCACAAAGATCTGCAT 772212
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| || | | |||||||| | || ||||| || || | ||| ||||| |
Sbjct 6974237 CCACCTCTTAACCTGAGAACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAATCAGCC 6974296
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || ||||| || || | ||||| ||||||||||| || ||||||
Sbjct 6974297 AAGGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGAGGA 6974356
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || |||||||| || | ||| ||||||| | || ||
Sbjct 6974357 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACC 6974416
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || ||||| || |||||||| || || |||||
Sbjct 6974417 TCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6974463
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | |||||| |||||||| | || || || | ||| | ||| || |||||
Sbjct 6974032 GTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCATCTTCAAGCTG 6974091
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || | || || | ||||||||| || ||||| || ||||| ||||| | || ||
Sbjct 6974092 CTTACCAGCGAAAATAAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTT 6974151
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
|||||||||| | | | |||||||| | || || || | || |||||||| |||||
Sbjct 6974152 TGCCTTGACGTTGTCAATAGTGTCAGAGCTTTCAACCTCCAAGGTAATGGTTTTGCCAGT 6974211
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
||||| || ||||||||||||||
Sbjct 6974212 CAGAGTCTTGACAAAGATCTGCAT 6974235
Score = 114 bits (126), Expect = 1e-20
Identities = 147/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTT 94867
||||| |||||||| | ||| ||||| || ||||| | ||| || |||||||||
Sbjct 6973583 GTAGACTCCTTTTGGATGTTGTAATCAGCG---AGTGTGCGTCCATCTTCAAGCTGTTTT 6973639
Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927
|| |||| || | ||| ||||||||||| ||||| ||||| ||||| | ||| ||||||
Sbjct 6973640 CCAGCAAATATGAGTCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGAATCTTTGCC 6973699
Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987
||||| ||| ||||| | | || || || | ||||| || || ||||| |
Sbjct 6973700 TTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCAGTTAAG 6973759
Query 94988 GTTTTCACAAAGATCTGCAT 95007
|| |||||||| ||||||||
Sbjct 6973760 GTCTTCACAAAAATCTGCAT 6973779
Score = 105 bits (116), Expect = 6e-18
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || ||||| || | ||| ||||| || || || || |||||
Sbjct 6973343 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG-CA-AGAGTCCGACCATCCT 6973400
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| || || | ||||| | ||| || || || || || || ||||| ||||| |
Sbjct 6973401 CAAGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCT 6973460
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| || |||||||| | | ||||| | | || || |||| || |||||||
Sbjct 6973461 GAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCAAGAGTAATGGTTT 6973520
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || |||||||| ||||||||
Sbjct 6973521 TTCCGGTAAGGGTCTTCACAAATATCTGCAT 6973551
Score = 104 bits (114), Expect = 2e-17
Identities = 167/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || ||||||| || | |||||| || | || || || ||||| |
Sbjct 6973768 AAAAATCTGCATACCACCTCTCAGACGAAGCACCAAATGAAGGGTTGACTCTTTTTGGAT 6973827
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| ||||| | |||| |||||| ||||| || ||| ||||||| | || ||
Sbjct 6973828 GTTGTAATCAGCAAGAGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTG 6973887
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| || || || || || ||||| || | || || || ||||| | | | |||||
Sbjct 6973888 CTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTC 6973947
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || |||| ||||| ||||| || || ||||| ||||||||||| |||||
Sbjct 6973948 TGAGCTCTCAACCTCAAGGGTGATTGTTTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007
>seq4
Length=18585056
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||||||||||||| | ||||| ||||| || | ||| || || || ||| | |
Sbjct 1278994 CGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTACCA 1279053
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || || ||||||||| | ||||| ||||| ||||| || || || ||||| ||||||
Sbjct 1279054 TCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCTTTG 1279113
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || || ||||| | ||| |||||||| | || || || | |||||
Sbjct 1279114 TCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCCACCTCCAAAGTGATA 1279173
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | || || ||||||||||||||
Sbjct 1279174 GTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | || |||||||||||||| | || || ||||| || | ||| ||||| |
Sbjct 2719697 CCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 2719638
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| |||||||| ||||||||| ||||||| || || ||||| || |||||
Sbjct 2719637 AAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGG 2719578
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| || || | || || ||||| ||| | | | ||||||| | || ||
Sbjct 2719577 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACC 2719518
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct 2719517 TCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || |||||||| || | || ||||| || ||| | |||||||
Sbjct 2588752 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCCGCCAACGTGCGGCCATCCTCC 2588811
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
| ||| |||||| | ||||| | || |||||||| |||||||||||||| || || |
Sbjct 2588812 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCCTGG 2588871
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| ||| | ||| ||||||| | || || || | ||||| || |||
Sbjct 2588872 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 2588931
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || |||||||||||
Sbjct 2588932 CCGGTGAGAGTCTTAACGAAGATCTGCAT 2588960
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | || ||||| ||||| || | ||||| ||||| || | ||| ||||| |
Sbjct 2588506 CCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCC 2588565
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || ||||| || || |||||| | ||||| || || ||||| || ||||||
Sbjct 2588566 AAAGTTCTGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 2588625
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || || || | || || ||||||||| | | | ||||||| | || ||
Sbjct 2588626 ATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACC 2588685
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || ||||| || || ||||| || || ||||||||
Sbjct 2588686 TCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||||||| | |||||| ||||| || | ||| || ||| || ||| |
Sbjct 2719913 CGCAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCA 2719854
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| ||||| | ||||| | | ||||| || |||||||||||||| |||
Sbjct 2719853 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTG 2719794
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||||||| | | | ||||| | | || || |||| ||||||
Sbjct 2719793 TCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCAAGGGTGATG 2719734
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || | ||| || || |||||||||||
Sbjct 2719733 GTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || |||||||| || | || ||||| || || | ||||||
Sbjct 1279456 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 1279515
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|||||||||||| | || || | || |||||||| |||||||| ||||| || || |
Sbjct 1279516 AGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGG 1279575
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| ||| | ||| ||||||| | || || || | ||||| || |||
Sbjct 1279576 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 1279635
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || ||||||||||||||
Sbjct 1279636 CCGGTGAGAGTCTTAACAAAGATCTGCAT 1279664
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||||| ||||| || | ||| || ||| || ||| ||||||
Sbjct 1278771 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTC 1278830
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||||||||| | ||||| | | ||||| || ||||| |||||||| ||||| |
Sbjct 1278831 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 1278890
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||| ||| | | | ||||| | | || || |||| || ||||| ||
Sbjct 1278891 GATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCAAGAGTAATGGTCTT 1278950
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||| ||||| ||||| || ||||||||
Sbjct 1278951 TCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | || ||||| |||||||| | || || ||||| || | ||| || ||| |
Sbjct 2719241 CCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCC 2719182
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || ||| || || ||||||||| | ||||| ||||| ||||| || ||||||
Sbjct 2719181 AAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 2719122
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| |||||||| | || || || || ||| | | ||||||| || ||
Sbjct 2719121 ATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCACC 2719062
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| ||||| ||||| | || || || || ||||||||
Sbjct 2719061 TCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | || ||||| |||||||| | || || ||||| || | ||| || || |
Sbjct 2719469 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTCAGCC 2719410
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || || || |||||| | ||||| ||||| ||||| || || ||
Sbjct 2719409 AAAGTTCTTCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 2719350
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| |||||||| | || || || || ||| | | ||||||| || ||
Sbjct 2719349 ATACCCTCTTTGTCCTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCACC 2719290
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| ||||| || ||||| ||||| |||||||||||
Sbjct 2719289 TCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | |||||| ||||| || | ||| || ||| || ||| ||||||
Sbjct 2588296 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCA 2588355
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| ||||| | ||||| | | ||||| || |||||||| ||||| ||||| |
Sbjct 2588356 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 2588415
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| ||| | | ||||| | | || || |||| |||||||| |||
Sbjct 2588416 ATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTT 2588475
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||| || || |||||||||||
Sbjct 2588476 CCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||| ||| |||||| | ||||| | || ||||| || ||||||||||| |||||
Sbjct 2718942 ATCCTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTT 2718883
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || || ||||||||| | ||| ||||||| || || |||| || ||
Sbjct 2718882 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAAT 2718823
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || || ||||| || || ||||||||
Sbjct 2718822 CGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || |||||||| || | || ||||| || || | ||||||
Sbjct 2718767 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 2718708
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| | || || | || |||||||| |||||||| || || || || |
Sbjct 2718707 AGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGG 2718648
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| ||| | ||| ||||| | | || || || | ||||| || |||
Sbjct 2718647 ATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTT 2718588
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || ||||||||||||||
Sbjct 2718587 CCGGTGAGAGTCTTAACAAAGATCTGCAT 2718559
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | ||| || || | ||| || |||||||| ||| |||||
Sbjct 1279240 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTGCTTTCCA 1279299
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| || || ||||| || ||||||||||| || ||||| | || || ||||||
Sbjct 1279300 GCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGCCTTG 1279359
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||||| || || |||| || || || ||||| || | ||
Sbjct 1279360 ACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTCCCGTTAAGGTC 1279419
Query 94991 TTCACAAAGATCTGCAT 95007
|| || || ||||||||
Sbjct 1279420 TTGACGAAAATCTGCAT 1279436
>seq1
Length=30427671
Score = 102 bits (112), Expect = 7e-17
Identities = 155/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851
|||| ||| | ||| | || || |||||||| | ||| ||||| || || || ||
Sbjct 20549975 CGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTG-CA-AGAGTCCGAC 20549918
Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| || ||||| ||||| ||||||| | ||| || || ||||| || || |||||||
Sbjct 20549917 CATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTT 20549858
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | ||| || ||||| | | ||| || |||| | || || || | || |
Sbjct 20549857 TGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACTTCTAGGGTAA 20549798
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||| || ||||| || ||||| || ||||||||
Sbjct 20549797 TGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCT 94862
||| | ||| || || || || | ||| ||||| ||| | |||| ||| || |||
Sbjct 20550192 GTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAA-AGTGCGACCATCTTCATGCT 20550134
Query 94863 GTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTT 94922
| || || ||||||| | ||| || || ||||| | ||| ||||||||||| | ||| |
Sbjct 20550133 GCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGAATCT 20550074
Query 94923 TTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAG 94982
||||||| || | | | || |||| | || || |||| ||||||||| ||||| |
Sbjct 20550073 TTGCCTTCACATTGTCAATCGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCG 20550014
Query 94983 TAAGAGTTTTCACAAAGATCTGCAT 95007
| | ||| || || || ||||||||
Sbjct 20550013 TCAAAGTCTTTACGAAAATCTGCAT 20549989
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839
|| ||||| | || | |||||| || | || || |||||||| | ||| ||||| ||
Sbjct 24277049 CCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCG 24277108
Query 94840 CATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
||||| || || || ||||| || ||| ||||||| | || |||||||| |||
Sbjct 24277109 ---AGTGTGCGACCGTCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGA 24277165
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
|| || ||||| || || | || || ||||| || | | | ||| |||| ||
Sbjct 24277166 GGGATTCCTTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCA 24277225
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||||||||||| || || | ||| || ||||| ||||||||
Sbjct 24277226 ACCTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | ||| | |||||| || || || | ||| ||||| || ||| | |
Sbjct 24276608 CGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAAAGTCCTTCCA 24276667
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| |||||||| || ||||||| | ||| || || ||||| || || | ||| ||
Sbjct 24276668 TCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCATTCCTTA 24276727
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || || ||||| | | ||||| | | || || || | || |||
Sbjct 24276728 TCCTGAATCTTAGCTTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATG 24276787
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || | ||||||||||||||| |||||
Sbjct 24276788 GTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822
Score = 93.3 bits (102), Expect = 4e-14
Identities = 167/244 (68%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||| | | ||||||| | | || || ||||| | | ||||| |
Sbjct 20549303 CCACCTCTCAACCTGAGAGCCAAGTGGAGTATTGAATCTTTTTGGATACTGTAATCAGCC 20549244
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || ||| |||| ||| |||||| | ||||||||| ||| |||||
Sbjct 20549243 AAAGTAGGGCCATCATCTAGCAGTTTACCGGAAAAGATGAGTCTTTGCTGGTCTTGAGGA 20549184
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| |||||| |||| || || ||||||||||| || ||||| | | ||||||
Sbjct 20549183 ATCCCTTCTATGTCCTAGATCTTTGCCTTGACATTATTGATGGTGTCGGAGCTTTCGACG 20549124
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACAACATAT 95020
|||| || ||| | | | | || ||||| || | |||| ||||| |||||| |
Sbjct 20549123 TCAAGGGTTATGCTCTATTCTGTTAGAGTCTTTGCGTAGATTTGCAT-----CAACATCT 20549069
Query 95021 TTGA 95024
||||
Sbjct 20549068 TTGA 20549065
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839
|||||||||| || | ||||| || | || || || || || | ||| ||||| |||
Sbjct 8315166 CCTCCTCTCAGACGTAGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCT 8315107
Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
|||||| ||| |||| ||||||||| | ||||| || | ||||||||| ||
Sbjct 8315106 ---AGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGT 8315050
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
|| || ||||| ||||| | || || || || || | ||| ||||| | ||
Sbjct 8315049 GGGATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCT 8314990
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | || || || || || || || |||||||| |||||||||||
Sbjct 8314989 ACCTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 8314940
>seq2
Length=19698289
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCTCCAGCTGTTTTC 94868
|| |||||||| || | ||| |||||| | || || | || || ||||| ||||
Sbjct 19344897 GTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCG--TCTTCGAGCTGCTTTC 19344840
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
|| | || || |||| ||||| || || || || ||||| ||||| | || || ||||
Sbjct 19344839 CGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCT 19344780
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
|||| | ||| ||||||| | ||||| || | ||||| || || || || || |
Sbjct 19344779 TGACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGG 19344720
Query 94989 TTTTCACAAAGATCTGCAT 95007
||||||| |||||||||||
Sbjct 19344719 TTTTCACGAAGATCTGCAT 19344701
>seq3
Length=23459830
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || |||||||| ||| | || || |||| ||||| || || || || ||||| |||
Sbjct 23037292 TCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTG 23037233
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| || | ||| ||||| | || || |||| || |||
Sbjct 23037232 TCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACCTCAAGGGTTATG 23037173
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || |||||||| |||||||||||
Sbjct 23037172 GTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 23037138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291160774520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |