Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq4 131 2e-25 seq1 102 7e-17 seq2 96.9 3e-15 seq3 82.4 7e-11 >seq5 Length=26975502 Score = 140 bits (154), Expect = 3e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || ||||| || || | ||||| || | || ||||| || || | ||| | Sbjct 772662 TTTGCATACCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGT 772721 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 ||||| || || | ||| || |||||||| ||| | || |||||||||||||||| Sbjct 772722 AATCGGCCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGAT 772781 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | |||||||| ||||| ||||| | ||| |||||||| || | ||| ||||||| | Sbjct 772782 CCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGC 772841 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||||| || || ||||| || |||||||| ||||| ||||| Sbjct 772842 TCTCAACCTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 123 bits (136), Expect = 2e-23 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || ||||| || | ||| ||||| || ||||| || ||||| Sbjct 772004 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG-CA-AGTGTGCGACCATCCT 772061 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||||||||| | ||||| | ||| || || ||||| || || ||||| ||||| | Sbjct 772062 CAAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCT 772121 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || |||||||| ||| ||||| | | || || || | || ||||| | Sbjct 772122 GAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTTTCAACCTCCAGAGTAATGGTCT 772181 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || ||||||||||||||||| Sbjct 772182 TTCCGGTAAGGGTCTTCACAAAGATCTGCAT 772212 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| || | | |||||||| | || ||||| || || | ||| ||||| | Sbjct 6974237 CCACCTCTTAACCTGAGAACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAATCAGCC 6974296 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || ||||| || || | ||||| ||||||||||| || |||||| Sbjct 6974297 AAGGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGAGGA 6974356 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || |||||||| || | ||| ||||||| | || || Sbjct 6974357 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACC 6974416 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || |||||||| || || ||||| Sbjct 6974417 TCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6974463 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| |||||||| | || || || | ||| | ||| || ||||| Sbjct 6974032 GTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCATCTTCAAGCTG 6974091 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || | || || | ||||||||| || ||||| || ||||| ||||| | || || Sbjct 6974092 CTTACCAGCGAAAATAAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTT 6974151 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 |||||||||| | | | |||||||| | || || || | || |||||||| ||||| Sbjct 6974152 TGCCTTGACGTTGTCAATAGTGTCAGAGCTTTCAACCTCCAAGGTAATGGTTTTGCCAGT 6974211 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || |||||||||||||| Sbjct 6974212 CAGAGTCTTGACAAAGATCTGCAT 6974235 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTT 94867 ||||| |||||||| | ||| ||||| || ||||| | ||| || ||||||||| Sbjct 6973583 GTAGACTCCTTTTGGATGTTGTAATCAGCG---AGTGTGCGTCCATCTTCAAGCTGTTTT 6973639 Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927 || |||| || | ||| ||||||||||| ||||| ||||| ||||| | ||| |||||| Sbjct 6973640 CCAGCAAATATGAGTCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGAATCTTTGCC 6973699 Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987 ||||| ||| ||||| | | || || || | ||||| || || ||||| | Sbjct 6973700 TTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCAGTTAAG 6973759 Query 94988 GTTTTCACAAAGATCTGCAT 95007 || |||||||| |||||||| Sbjct 6973760 GTCTTCACAAAAATCTGCAT 6973779 Score = 105 bits (116), Expect = 6e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || ||||| || | ||| ||||| || || || || ||||| Sbjct 6973343 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG-CA-AGAGTCCGACCATCCT 6973400 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || | ||||| | ||| || || || || || || ||||| ||||| | Sbjct 6973401 CAAGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCT 6973460 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || |||||||| | | ||||| | | || || |||| || ||||||| Sbjct 6973461 GAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCAAGAGTAATGGTTT 6973520 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || |||||||| |||||||| Sbjct 6973521 TTCCGGTAAGGGTCTTCACAAATATCTGCAT 6973551 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||||| || | |||||| || | || || || ||||| | Sbjct 6973768 AAAAATCTGCATACCACCTCTCAGACGAAGCACCAAATGAAGGGTTGACTCTTTTTGGAT 6973827 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| | |||| |||||| ||||| || ||| ||||||| | || || Sbjct 6973828 GTTGTAATCAGCAAGAGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTG 6973887 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| || || || || || ||||| || | || || || ||||| | | | ||||| Sbjct 6973888 CTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTC 6973947 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || |||| ||||| ||||| || || ||||| ||||||||||| ||||| Sbjct 6973948 TGAGCTCTCAACCTCAAGGGTGATTGTTTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007 >seq4 Length=18585056 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | ||||| ||||| || | ||| || || || ||| | | Sbjct 1278994 CGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTACCA 1279053 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || ||||||||| | ||||| ||||| ||||| || || || ||||| |||||| Sbjct 1279054 TCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCTTTG 1279113 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || ||||| | ||| |||||||| | || || || | ||||| Sbjct 1279114 TCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCCACCTCCAAAGTGATA 1279173 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| | || || |||||||||||||| Sbjct 1279174 GTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || |||||||||||||| | || || ||||| || | ||| ||||| | Sbjct 2719697 CCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 2719638 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| |||||||| ||||||||| ||||||| || || ||||| || ||||| Sbjct 2719637 AAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGG 2719578 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | || || ||||| ||| | | | ||||||| | || || Sbjct 2719577 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACC 2719518 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || ||||| || ||||| ||||| ||||||||||| Sbjct 2719517 TCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || |||||||| || | || ||||| || ||| | ||||||| Sbjct 2588752 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCCGCCAACGTGCGGCCATCCTCC 2588811 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| |||||| | ||||| | || |||||||| |||||||||||||| || || | Sbjct 2588812 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCCTGG 2588871 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | ||| ||||||| | || || || | ||||| || ||| Sbjct 2588872 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 2588931 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || || ||||||||||| Sbjct 2588932 CCGGTGAGAGTCTTAACGAAGATCTGCAT 2588960 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || ||||| ||||| || | ||||| ||||| || | ||| ||||| | Sbjct 2588506 CCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCC 2588565 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||||| || || |||||| | ||||| || || ||||| || |||||| Sbjct 2588566 AAAGTTCTGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 2588625 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || || || | || || ||||||||| | | | ||||||| | || || Sbjct 2588626 ATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACC 2588685 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || ||||| || || ||||| || || |||||||| Sbjct 2588686 TCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||||| | |||||| ||||| || | ||| || ||| || ||| | Sbjct 2719913 CGCAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCA 2719854 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| ||||| | ||||| | | ||||| || |||||||||||||| ||| Sbjct 2719853 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTG 2719794 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | | | ||||| | | || || |||| |||||| Sbjct 2719793 TCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCAAGGGTGATG 2719734 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || | ||| || || ||||||||||| Sbjct 2719733 GTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || |||||||| || | || ||||| || || | |||||| Sbjct 1279456 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 1279515 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||||||| | || || | || |||||||| |||||||| ||||| || || | Sbjct 1279516 AGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGG 1279575 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | ||| ||||||| | || || || | ||||| || ||| Sbjct 1279576 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 1279635 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || |||||||||||||| Sbjct 1279636 CCGGTGAGAGTCTTAACAAAGATCTGCAT 1279664 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||||| ||||| || | ||| || ||| || ||| |||||| Sbjct 1278771 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTC 1278830 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||||| | ||||| | | ||||| || ||||| |||||||| ||||| | Sbjct 1278831 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 1278890 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | | ||||| | | || || |||| || ||||| || Sbjct 1278891 GATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCAAGAGTAATGGTCTT 1278950 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| ||||| ||||| || |||||||| Sbjct 1278951 TCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || ||||| |||||||| | || || ||||| || | ||| || ||| | Sbjct 2719241 CCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCC 2719182 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| || || ||||||||| | ||||| ||||| ||||| || |||||| Sbjct 2719181 AAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 2719122 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | || || || || ||| | | ||||||| || || Sbjct 2719121 ATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCACC 2719062 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| ||||| ||||| | || || || || |||||||| Sbjct 2719061 TCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || ||||| |||||||| | || || ||||| || | ||| || || | Sbjct 2719469 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTCAGCC 2719410 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || || || |||||| | ||||| ||||| ||||| || || || Sbjct 2719409 AAAGTTCTTCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 2719350 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | || || || || ||| | | ||||||| || || Sbjct 2719349 ATACCCTCTTTGTCCTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCACC 2719290 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| ||||| || ||||| ||||| ||||||||||| Sbjct 2719289 TCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | |||||| ||||| || | ||| || ||| || ||| |||||| Sbjct 2588296 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCA 2588355 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| ||||| | ||||| | | ||||| || |||||||| ||||| ||||| | Sbjct 2588356 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 2588415 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | | ||||| | | || || |||| |||||||| ||| Sbjct 2588416 ATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTT 2588475 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| || || ||||||||||| Sbjct 2588476 CCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| |||||| | ||||| | || ||||| || ||||||||||| ||||| Sbjct 2718942 ATCCTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTT 2718883 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||||||| | ||| ||||||| || || |||| || || Sbjct 2718882 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAAT 2718823 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || ||||| || || |||||||| Sbjct 2718822 CGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || |||||||| || | || ||||| || || | |||||| Sbjct 2718767 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 2718708 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || ||| | || || | || |||||||| |||||||| || || || || | Sbjct 2718707 AGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGG 2718648 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | ||| ||||| | | || || || | ||||| || ||| Sbjct 2718647 ATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTT 2718588 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || |||||||||||||| Sbjct 2718587 CCGGTGAGAGTCTTAACAAAGATCTGCAT 2718559 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || || | ||| || |||||||| ||| ||||| Sbjct 1279240 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTGCTTTCCA 1279299 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| || || ||||| || ||||||||||| || ||||| | || || |||||| Sbjct 1279300 GCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGCCTTG 1279359 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||||| || || |||| || || || ||||| || | || Sbjct 1279360 ACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTCCCGTTAAGGTC 1279419 Query 94991 TTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 1279420 TTGACGAAAATCTGCAT 1279436 >seq1 Length=30427671 Score = 102 bits (112), Expect = 7e-17 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| ||| | ||| | || || |||||||| | ||| ||||| || || || || Sbjct 20549975 CGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTG-CA-AGAGTCCGAC 20549918 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| || ||||| ||||| ||||||| | ||| || || ||||| || || ||||||| Sbjct 20549917 CATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTT 20549858 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || ||||| | | ||| || |||| | || || || | || | Sbjct 20549857 TGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACTTCTAGGGTAA 20549798 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| || ||||| || ||||| || |||||||| Sbjct 20549797 TGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCT 94862 ||| | ||| || || || || | ||| ||||| ||| | |||| ||| || ||| Sbjct 20550192 GTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAA-AGTGCGACCATCTTCATGCT 20550134 Query 94863 GTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTT 94922 | || || ||||||| | ||| || || ||||| | ||| ||||||||||| | ||| | Sbjct 20550133 GCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGAATCT 20550074 Query 94923 TTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAG 94982 ||||||| || | | | || |||| | || || |||| ||||||||| ||||| | Sbjct 20550073 TTGCCTTCACATTGTCAATCGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCG 20550014 Query 94983 TAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||| || || || |||||||| Sbjct 20550013 TCAAAGTCTTTACGAAAATCTGCAT 20549989 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839 || ||||| | || | |||||| || | || || |||||||| | ||| ||||| || Sbjct 24277049 CCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCG 24277108 Query 94840 CATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 ||||| || || || ||||| || ||| ||||||| | || |||||||| ||| Sbjct 24277109 ---AGTGTGCGACCGTCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGA 24277165 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || || ||||| || || | || || ||||| || | | | ||| |||| || Sbjct 24277166 GGGATTCCTTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCA 24277225 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||||||||| || || | ||| || ||||| |||||||| Sbjct 24277226 ACCTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| || | ||| | |||||| || || || | ||| ||||| || ||| | | Sbjct 24276608 CGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAAAGTCCTTCCA 24276667 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| |||||||| || ||||||| | ||| || || ||||| || || | ||| || Sbjct 24276668 TCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCATTCCTTA 24276727 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || ||||| | | ||||| | | || || || | || ||| Sbjct 24276728 TCCTGAATCTTAGCTTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATG 24276787 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | ||||||||||||||| ||||| Sbjct 24276788 GTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822 Score = 93.3 bits (102), Expect = 4e-14 Identities = 167/244 (68%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||| | | ||||||| | | || || ||||| | | ||||| | Sbjct 20549303 CCACCTCTCAACCTGAGAGCCAAGTGGAGTATTGAATCTTTTTGGATACTGTAATCAGCC 20549244 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || ||| |||| ||| |||||| | ||||||||| ||| ||||| Sbjct 20549243 AAAGTAGGGCCATCATCTAGCAGTTTACCGGAAAAGATGAGTCTTTGCTGGTCTTGAGGA 20549184 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||||| |||| || || ||||||||||| || ||||| | | |||||| Sbjct 20549183 ATCCCTTCTATGTCCTAGATCTTTGCCTTGACATTATTGATGGTGTCGGAGCTTTCGACG 20549124 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACAACATAT 95020 |||| || ||| | | | | || ||||| || | |||| ||||| |||||| | Sbjct 20549123 TCAAGGGTTATGCTCTATTCTGTTAGAGTCTTTGCGTAGATTTGCAT-----CAACATCT 20549069 Query 95021 TTGA 95024 |||| Sbjct 20549068 TTGA 20549065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839 |||||||||| || | ||||| || | || || || || || | ||| ||||| ||| Sbjct 8315166 CCTCCTCTCAGACGTAGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCT 8315107 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 |||||| ||| |||| ||||||||| | ||||| || | ||||||||| || Sbjct 8315106 ---AGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGT 8315050 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || || ||||| ||||| | || || || || || | ||| ||||| | || Sbjct 8315049 GGGATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCT 8314990 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || || || || || || |||||||| ||||||||||| Sbjct 8314989 ACCTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 8314940 >seq2 Length=19698289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCTCCAGCTGTTTTC 94868 || |||||||| || | ||| |||||| | || || | || || ||||| |||| Sbjct 19344897 GTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCG--TCTTCGAGCTGCTTTC 19344840 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | || || |||| ||||| || || || || ||||| ||||| | || || |||| Sbjct 19344839 CGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCT 19344780 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | ||| ||||||| | ||||| || | ||||| || || || || || | Sbjct 19344779 TGACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGG 19344720 Query 94989 TTTTCACAAAGATCTGCAT 95007 ||||||| ||||||||||| Sbjct 19344719 TTTTCACGAAGATCTGCAT 19344701 >seq3 Length=23459830 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || |||||||| ||| | || || |||| ||||| || || || || ||||| ||| Sbjct 23037292 TCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTG 23037233 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || | ||| ||||| | || || |||| || ||| Sbjct 23037232 TCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACCTCAAGGGTTATG 23037173 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||| ||||||||||| Sbjct 23037172 GTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 23037138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291160774520