Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq4 122 8e-23 seq3 122 8e-23 seq1 116 3e-21 seq5 113 4e-20 >seq2 Length=19698289 Score = 123 bits (136), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| || |||||||||||| | ||| || ||| || |||||||| || Sbjct 19344897 GTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCG 19344838 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || |||||||||||||| ||||||||||| ||||| ||| || |||| Sbjct 19344837 GCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG 19344778 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | |||||||| |||| || | || || || ||||| ||| Sbjct 19344777 ACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTT 19344718 Query 131218 TTTACGAAAATCTGCATGACTTATTTT 131244 || ||||| |||||||| ||| |||| Sbjct 19344717 TTCACGAAGATCTGCAT--CTTTTTTT 19344693 >seq4 Length=18585056 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| || || | ||| |||||||| || |||||||| ||| || || || ||| Sbjct 1278769 AGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCC 1278828 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||| || || ||| |||| | ||||||||||||||||||||| ||||| ||||| Sbjct 1278829 TCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCC 1278888 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| || ||| | | || | || |||| | ||| | || | |||| ||| Sbjct 1278889 TGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCAAGAGTAATGGTC 1278948 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || ||||| || |||||||||||||| Sbjct 1278949 TTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || || || | || |||||||| || |||||||| ||| | Sbjct 2719925 CCACCACGAAGACGCAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 2719866 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| | |||||||||||||||||| Sbjct 2719865 AAAGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2719806 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| | || | Sbjct 2719805 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACT 2719746 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | ||| || ||||| |||||||| Sbjct 2719745 TCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || |||||||| || |||||||| ||| | Sbjct 2588278 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 2588337 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| | |||||||||||||||||| Sbjct 2588338 AAAGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2588397 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | || |||| | ||| | Sbjct 2588398 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTCTCAACT 2588457 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| | ||| |||||||| |||||||| Sbjct 2588458 TCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || ||||| | || |||||||| || ||||||||||| | Sbjct 2588506 CCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCC 2588565 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| || ||||| || ||| |||| || | ||||||||||||||| Sbjct 2588566 AAAGTTCTGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 2588625 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || || | | ||| | Sbjct 2588626 ATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACC 2588685 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || ||||| ||||| |||||||||||||| Sbjct 2588686 TCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| ||| || || | |||||||||||| || ||||||||||| | Sbjct 2719697 CCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 2719638 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| | || || || || |||| || | |||||||||||||||| Sbjct 2719637 AAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGG 2719578 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||| | | || | || || | | ||| | Sbjct 2719577 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACC 2719518 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || ||||| |||||||| Sbjct 2719517 TCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTC 131081 || || | ||| | ||| |||||||| || || ||||| || | || | || | || Sbjct 2718998 AGAACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGAGTTCTGCCA-TC 2718940 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| | |||||| || ||| |||| | | ||||||||||||||| || || |||||||| Sbjct 2718939 CTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTTGTC 2718880 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||||| | || | || || | ||| | || | |||| || Sbjct 2718879 TTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGT 2718820 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| ||||| |||||||||||||| Sbjct 2718819 CTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || || || | || |||||||| ||||||||||| ||| | Sbjct 2719241 CCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCC 2719182 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | || | || || || || || || ||| |||| || | ||||||||||||||| Sbjct 2719181 AAAGTTCTGCCA-TCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGG 2719123 Query 131127 GATTCCTTCTTTGTC 131141 || || |||||||| Sbjct 2719122 AATACCCTCTTTGTC 2719108 >seq3 Length=23459830 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||||| ||||| || |||||||| ||| Sbjct 23037364 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 23037305 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || ||||| || || ||| | || || |||||||||||||| ||| Sbjct 23037304 AGGGTACGGCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 23037245 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| ||| ||| | | || | || |||| || || | Sbjct 23037244 ATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACC 23037185 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || ||||| ||||| ||||| |||||||| Sbjct 23037184 TCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 23037138 >seq1 Length=30427671 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | || ||||||||||| ||||||||||| Sbjct 20549987 CCACCACGAAGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCA 20549928 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || |||||||| ||||| |||| | | ||| ||||| || ||| Sbjct 20549927 AGAGTCCGACCATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 20549868 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| || || ||| || | || | ||||| | | ||| | Sbjct 20549867 ATCCCTTCTTTGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACT 20549808 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||| ||||| || || || |||||||||||||| Sbjct 20549807 TCTAGGGTAATGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | |||||| | || | || ||||||||||| ||||||||||| Sbjct 20549531 CCACCACGGAGTCTCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCA 20549472 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| | |||| | ||| || ||||||||| Sbjct 20549471 AGAGTGCGACCATCCTCAAGCTGTTTACCCGCGAATATTAGTCTCTGTTGATCCGGAGGG 20549412 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || |||| | | | || | ||| || || ||| | Sbjct 20549411 ATTCCTTCCTTGTCTTGGATCTT-AGCTTTAACATTGTCAATAGTGTCTGTACTCTCAAC 20549353 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||| |||||| || || || ||||| |||||||| Sbjct 20549352 TTCTAGGGTAATGGTTTAACCGGTAAGGGTCTTGACGAATATCTGCAT 20549305 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| ||||| ||||| | ||| ||||||||||| ||||||||||| Sbjct 24277049 CCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCG 24277108 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || |||||||| || || |||| | | |||||| ||||||||| Sbjct 24277109 AGTGTGCGACCGTCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGG 24277168 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||| | | || | |||||| | || | Sbjct 24277169 ATTCCTTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCAACC 24277228 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| || || | ||| || || ||||||||||| Sbjct 24277229 TCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 || || | || ||| || || ||||| | |||||||| || || ||||||||||| ||| Sbjct 8315166 CCTCCTCTCAGACGTAGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCT 8315107 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || | | | || || | || || || ||| |||| || || ||||| ||||| || Sbjct 8315106 AGTGTTCTTCCA-TCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 8315048 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| ||| || | | || | || || | || || | Sbjct 8315047 GATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCTAC 8314988 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || ||||| ||||| ||||| |||||||| Sbjct 8314987 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 8314940 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 |||||||| | ||| || || | || | || ||||| || || ||||||||||| ||| Sbjct 20550215 CCACCGCGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCT 20550156 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | |||| || || ||||||||||||| |||| | | ||| ||||| || | Sbjct 20550155 AAAG-TGCGACCATCTTCATGCTGCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGA 20550097 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || ||||||||||| ||| | | || ||| | | || | ||||| | | || | Sbjct 20550096 AATCCCTTCTTTGTC-CTGAATCTTTGCCTTCACATTGTCAATCGTATCAGAGCTTTCCA 20550038 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | ||| ||||||||||||||||| Sbjct 20550037 CTTCAAGCGTGATGGTCTTTCCCGTCAAAGTCTTTACGAAAATCTGCAT 20549989 >seq5 Length=26975502 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||| ||||| ||||| | ||| ||||| ||||| ||||||||||| Sbjct 6973781 CCACCTCTCAGACGAAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCA 6973840 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||||||||||| || || |||| | | |||||||||||| ||| Sbjct 6973841 AGAGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 6973900 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| ||||| || ||| || |||| | || | || || | | ||| | Sbjct 6973901 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACC 6973960 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||||| || ||||| || || || || ||||| Sbjct 6973961 TCAAGGGTGATTGTTTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| ||||| ||||| | |||||||||||||||||||||||| || Sbjct 772442 CCACCTCTGAGACGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCA 772501 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || |||||||| || || |||| | | |||||| ||||||||| Sbjct 772502 AGAGTTCTTCCGTCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGG 772561 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || ||| |||| | || | ||| || | | ||| | Sbjct 772562 ATTCCTTCCTTGTCCTGGATCTT-TGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAAC 772620 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || ||||| || || || || ||||| Sbjct 772621 CTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||||| || || ||||| | ||| || || || ||||||||||||||| | Sbjct 772670 CCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCC 772729 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || |||||||| || || ||| | ||||| | ||||| |||||||| Sbjct 772730 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGA 772789 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||| | | || | || || | | ||| | Sbjct 772790 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 772848 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || ||||| ||||| || ||||| Sbjct 772849 CTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||||||||||| || ||||||||||| Sbjct 6973325 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 6973384 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| | | ||| |||||||| ||| Sbjct 6973385 AGAGTCCGACCATCCTCAAGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGGG 6973444 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | || || | | ||| | Sbjct 6973445 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACC 6973504 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||| ||||| || || || || || |||||||| Sbjct 6973505 TCAAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAATATCTGCAT 6973551 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | |||||||||||||| ||||||||||| Sbjct 772214 CCACCACGGAGACGAAGCACAAGATGAAGTGTCGACTCCTTTTGGATGTTGTAATCTGCA 772273 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || || |||| | | |||||| |||||||| Sbjct 772274 AGGGTGCGTCCATCTTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGA 772333 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| ||||| || ||| || |||| | || | || || | ||| | Sbjct 772334 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCTGAACTCTCAACC 772393 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||||| || || || || || || || ||||| Sbjct 772394 TCAAGGGTGATTGTTTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 772440 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || || || || ||||||||||| || |||||| || ||||||||||| || Sbjct 6974267 GTTGATTCTTTCTGGATGTTGTAATCAGCCAAGGTGCGGCCATCTTCTAGCTGCTTACCA 6974326 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || | |||||||| ||||| || ||||| ||||| ||| || ||| Sbjct 6974327 GCGAAGATCAATCTTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTA 6974386 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | | ||| | |||| || | ||| ||||| || || ||| Sbjct 6974387 ACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTACCAGTGAGTGTT 6974446 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||| ||||| Sbjct 6974447 TTCACGAAAATTTGCAT 6974463 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || ||||||||||| || ||||| || Sbjct 6974009 CCACCACGGAGACGAAGGACAAGGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCA 6974068 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || |||||||| || ||| | || | | ||||||||||||||| Sbjct 6974069 AGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCCGGAGGG 6974128 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | ||| || | | || | Sbjct 6974129 ATTCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCAATAGTGTCAGAGCTTTCAACC 6974188 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||| || || ||||| || || || |||||||| Sbjct 6974189 TCCAAGGTAATGGTTTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 6974235 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||||||||||| || ||||||||||| Sbjct 771986 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 772045 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| |||| | | ||| ||||| || ||| Sbjct 772046 AGTGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 772105 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | || || | | || | Sbjct 772106 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTTTCAACC 772165 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || ||||| || || || || || |||||||| Sbjct 772166 TCCAGAGTAATGGTCTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 772212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | || || || || || ||||||||||| Sbjct 14953290 CCACCTCTCAACCTGAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCA 14953349 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||| || || || |||||| | ||| || ||||||||| Sbjct 14953350 AGAGTGCGACCATCGTCAAGCTGTTTACCAGCAAAGATTAGTCTCTGTTGATCCGGAGGG 14953409 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 | |||||| ||||| ||| || |||| | | | || | ||| || | ||| | Sbjct 14953410 ACTCCTTCCTTGTCTTGGATCTT-AGCTTTAACATTGTCAATAGTGTCTGAACTCTCAAC 14953468 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||||||||| || || || || || |||||||| Sbjct 14953469 TTCAAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 14953516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012758698880