Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3 131 1e-25 seq2 131 1e-25 seq5 125 5e-24 seq1 114 9e-21 seq4 107 1e-18 >seq3 Length=23459830 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 14202485 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 14202426 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 14202425 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 14202391 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||| |||| |||||||||||||||||||||||| | Sbjct 14200493 CTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTC 14200434 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 14200433 GCCCGTATTTAGCCTT 14200418 >seq2 Length=19698289 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 8514 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 8455 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 8454 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8420 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||| |||| |||||||||||||||||||||||| | Sbjct 6522 CTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTC 6463 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 6462 GCCCGTATTTAGCCTT 6447 >seq5 Length=26975502 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| ||||| | ||||||||||| || || || ||||| |||||||| | Sbjct 772668 TACCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGG 772727 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || |||| ||||| ||||| ||||||| | ||| ||||| | | Sbjct 772728 CCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAG 772787 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| |||||| ||| ||| ||| ||||| | || || || || |||| Sbjct 772788 GAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAA 772847 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || ||||| || || || | ||||||||||| || ||||| Sbjct 772848 CCTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | | ||||| || ||||| || || || || |||||||| | Sbjct 14953288 TACCACCTCTCAACCTGAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCTG 14953347 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | ||||| | ||||| || ||||| ||||| | |||||||| | | Sbjct 14953348 CAAGAGTGCGACCATCGTCAAGCTGTTTACCAGCAAAGATTAGTCTCTGTTGATCCGGAG 14953407 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 |||| ||||| ||||| || || || ||||| | | ||| ||| ||| |||| Sbjct 14953408 GGACTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAA 14953467 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||| |||||||| || | || || || ||||||||||| Sbjct 14953468 CTTCAAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 14953516 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | |||||||||||| || |||||||||||| ||||| |||| Sbjct 772440 TACCACCTCTGAGACGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAG 772499 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | |||| || | || || |||||||| || || | || ||||| | | Sbjct 772500 CAAGAGTTCTTCCGTCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAG 772559 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| || ||| || || || | | ||| || || |||| Sbjct 772560 GGATTCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAA 772619 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| || || || |||| || || || || || ||||| Sbjct 772620 CCTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||| | |||||||||||| || ||| ||||| || |||||||||| Sbjct 6973779 TACCACCTCTCAGACGAAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAG 6973838 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || |||| || || |||||||| || || | || || || | | Sbjct 6973839 CAAGAGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTG 6973898 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || ||||| || || || || ||||| | | || ||| || |||| Sbjct 6973899 GGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAA 6973958 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || ||||||||||||| || ||||| || || ||||| Sbjct 6973959 CCTCAAGGGTGATTGTTTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||| |||||||| |||||| || || |||||||| | Sbjct 6973325 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 6973384 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || || || || || || || | ||||| || | ||| Sbjct 6973385 AGAGTCCGACCATCCTCAAGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGGG 6973444 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| ||| || ||| ||||| | | || ||| || ||||| Sbjct 6973445 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACC 6973504 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||||| ||||| || || | ||| ||||| ||||||||||| Sbjct 6973505 TCAAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAATATCTGCAT 6973551 >seq1 Length=30427671 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| ||||||| ||| | ||||||||||| || ||| || || || |||||||||| Sbjct 8315167 ACCTCCTCTCAGACGTAGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGC 8315108 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | | | || || |||||||||||||| || || | ||||| ||||| | || Sbjct 8315107 TAGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 8315048 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| ||||| || || |||||||| | || || ||| ||| || Sbjct 8315047 GATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCTAC 8314988 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||| || || || || ||||| | |||||||||||| |||||||| || Sbjct 8314987 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 8314937 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| ||| | ||||| || ||||||||| || |||||||| | Sbjct 20549987 CCACCACGAAGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCA 20549928 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || ||||| ||||| || || | ||||| || | ||| Sbjct 20549927 AGAGTCCGACCATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 20549868 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||||||| ||| || ||||| || | || ||||| || |||||| Sbjct 20549867 ATCCCTTCTTTGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACT 20549808 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| ||||| ||||| || || | ||| |||||||| |||||||| Sbjct 20549807 TCTAGGGTAATGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| || ||||||||| || |||||||| | | | || | || || | ||| Sbjct 20549507 TGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTGCGACCATCCTCAAGCTGT 20549448 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || |||||||| | |||||||| | |||| ||||| ||||| || || Sbjct 20549447 TTACCCGCGAATATTAGTCTCTGTTGATCCGGAGGGATTCCTTCCTTGTCTTGGATCTTA 20549388 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 || ||||| | | ||| ||| ||| |||||||||| ||||| |||| ||| || Sbjct 20549387 GCTTTAACATTGTCAATAGTGTCTGTACTCTCAACTTCTAGGGTAATGGTTTAACCGGTA 20549328 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | ||| || |||||||||||||| Sbjct 20549327 AGGGTCTTGACGAATATCTGCAT 20549305 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| ||| || || || |||||||| | ||| || | || || || Sbjct 20550191 TGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCATGCTGC 20550132 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || ||||| || || | ||||| || | | | |||||||||||| ||| ||| Sbjct 20550131 TTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGAATCTTT 20550072 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||||||| | | ||||| ||||| ||||| | || || || || |||||| Sbjct 20550071 GCCTTCACATTGTCAATCGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCGTC 20550012 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| |||||||| Sbjct 20550011 AAAGTCTTTACGAAAATCTGCAT 20549989 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/229 (68%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||||||| | ||||| || |||||| || ||||||| | || Sbjct 24276822 TACCACCACGAAGACGCAACACAAGGTGAAGCGTAGACTCCTTCTGGATATTGTCAGCA- 24276880 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | || || | ||||| || || || || || | ||||| || | | Sbjct 24276881 --AGTGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTG 24276938 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||| || |||||| || | || || ||| || |||| Sbjct 24276939 GGATACCTTCCTTGTCCTGAATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCTCTCAA 24276998 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || | ||| ||||| ||||||||||| Sbjct 24276999 CCTCCAAAGTGATTGTCTTTCCAGTGAGGGTCTTCACAAATATCTGCAT 24277047 >seq4 Length=18585056 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | || |||||||||||| ||||| || |||||| || || |||||||| | Sbjct 2719699 TACCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 2719640 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || ||||||||||||||||| || | | || || || | | Sbjct 2719639 CCAAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAG 2719580 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || ||| || || |||||| || | | || || || || | Sbjct 2719579 GGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTA 2719520 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || ||||| || || || | || |||||||| |||||||| Sbjct 2719519 CCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||||||||| ||||| || |||||| ||||| ||||| |||| Sbjct 1278980 TACCTCCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAG 1279039 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | || || | |||||||||||| || || | | || || || | | Sbjct 1279040 CCAAAGTTCTACCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTG 1279099 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || ||||||||| || || || ||||| | || ||| || || || | Sbjct 1279100 GGATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCCA 1279159 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || ||||| || || ||||| || || || || |||||||| Sbjct 1279160 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | || |||||| ||||| || || ||| |||||| ||||| ||||| || | Sbjct 2719243 TACCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGG 2719184 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | || || | |||||||||||| || || | | || || || | | Sbjct 2719183 CCAAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAG 2719124 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || |||||||| || || ||||| || | | || || ||| || | Sbjct 2719123 GAATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCA 2719064 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || |||||||| || ||||| || || ||||| |||||||| Sbjct 2719063 CCTCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947171424817