Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3 152 1e-31 seq1 138 3e-27 seq4 132 1e-25 seq2 131 4e-25 seq5 114 3e-20 >seq3 Length=23459830 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| ||| ||| || ||||| || ||||||||| Sbjct 23037364 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 23037305 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||||| || ||||| |||| ||||| || |||| Sbjct 23037304 AGGGTACGGCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 23037245 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| ||||| ||||| || || || | ||| ||||| || Sbjct 23037244 ATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACC 23037185 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || || || || ||||| |||||||| Sbjct 23037184 TCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 23037138 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||| || | ||| || ||||| | || ||||| ||||| || || ||||| Sbjct 3005546 CCACCGCAAAGACGAAGGACAAGATGCAGTGTTGACTCTTTCTGGATGTTGTAATCGGCA 3005605 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| || ||||| ||||| || | ||| || | || Sbjct 3005606 AGAGTACGACCATCCTCGAGTTGCTTACCTGCAAAGATAAGTCTCTGCTGGCGAGGAAGG 3005665 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||||||||| ||||| || || || ||||| || |||| || ||| || Sbjct 3005666 ATTCCTTCTTTATCTTGGATCTTGGCCTTGACGTTATCGATAGTGTCTGAGCT---TTTG 3005722 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || || ||||||| || || || ||||| Sbjct 3005723 ACCTCAAGGGTTATGGTCTTTCCCGTAAGAGTCTGCACAAAGATTTGCAT 3005772 >seq1 Length=30427671 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| ||||| ||||| || || || || || || | ||| ||| Sbjct 8315151 AGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCTAGTGTTCTTCCATCT 8315092 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || ||||||||||| |||||||||| || || ||| |||||||||||| || || Sbjct 8315091 TCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCT 8315032 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||||||||| || || || | || |||||||| || | || || ||| Sbjct 8315031 TGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCTACCTCTAAGGTTATTGTC 8314972 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482 ||||| || || || || ||||| ||||||||| | || || Sbjct 8314971 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTCTTGTT 8314931 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| |||||||| || || || |||| || || |||||||| || || || || Sbjct 20549531 CCACCACGGAGTCTCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCA 20549472 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| || ||||| || || | ||||||| ||| Sbjct 20549471 AGAGTGCGACCATCCTCAAGCTGTTTACCCGCGAATATTAGTCTCTGTTGATCCGGAGGG 20549412 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || ||||| || || || |||| || | || ||| Sbjct 20549411 ATTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGTACTCTCAACT 20549352 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || | ||||| || |||||||||||||||||||| Sbjct 20549351 TCTAGGGTAATGGTTTAACCGGTAAGGGTCTTGACGAATATCTGCAT 20549305 Score = 122 bits (134), Expect = 2e-22 Identities = 169/234 (72%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || || |||| || ||||| ||||| || || || || Sbjct 20550216 TCCACCGCGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGC 20550157 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || ||||| || || ||||| ||||| || | |||||| ||||| Sbjct 20550156 TAAAGTGCGACCATCTTCATGCTGCTTGCCTGCAAAGATGAGTCTCTGTTG---GTCTGG 20550100 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 || |||||||| ||||| || || || ||||| || || || | ||| ||| Sbjct 20550099 TGAAATCCCTTCTTTGTCCTGAATCTTTGCCTTCACATTGTCAATCGTATCAGAGCT--- 20550043 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| |||||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 20550042 TTCCACTTCAAGCGTGATGGTCTTTCCCGTCAAAGTCTTTACGAAAATCTGCAT 20549989 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | ||| | ||| || |||||||| || || || ||| Sbjct 24277049 CCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCG 24277108 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || || ||||| || | ||| ||| ||| Sbjct 24277109 AGTGTGCGACCGTCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGG 24277168 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || || || |||| ||| ||| || Sbjct 24277169 ATTCCTTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCAACC 24277228 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || |||| ||||||||| || |||||||| Sbjct 24277229 TCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 9/230 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | | || || |||| ||| || || |||||||| ||| || Sbjct 24276824 CCACCACGAAGACGCAACACAAGGTGAAGCGTAGACTCCTTCTGGATATT---GTCAGCA 24276880 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| || |||||||| || | |||||| |||| Sbjct 24276881 AGTGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 24276940 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || || |||||||| || || | || |||| || Sbjct 24276941 ATACCTTCCTTGTCCTGAATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCTC---TCA 24276997 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || || || ||||| || ||||||||||| Sbjct 24276998 ACCTCCAAAGTGATTGTCTTTCCAGTGAGGGTCTTCACAAATATCTGCAT 24277047 >seq4 Length=18585056 Score = 132 bits (146), Expect = 1e-25 Identities = 175/240 (73%), Gaps = 7/240 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | || | ||| ||| || |||||||| || || || Sbjct 2588734 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCCGCC 2588793 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||| || || || || || ||||| |||||||| || | ||| ||| || Sbjct 2588794 AACGTGCGGCCATCCTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 2588853 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | || ||| ||| Sbjct 2588854 ATACCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 2588910 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 || ||||| ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||| || Sbjct 2588911 ACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCA-TCTGTTAATC 2588969 Score = 123 bits (136), Expect = 6e-23 Identities = 173/240 (72%), Gaps = 7/240 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | || | ||| ||| || |||||||| || || || Sbjct 1279438 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCC 1279497 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||| || || || |||| |||||||| ||||| || || | ||| ||| || Sbjct 1279498 AACGTACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 1279557 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | || ||| ||| Sbjct 1279558 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 1279614 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 || ||||| ||||| ||||| ||||| |||||||| || || ||||||| | ||| |||| Sbjct 1279615 ACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCA-TCTGTAATTC 1279673 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| | || ||||| || || | || ||||| |||||| Sbjct 2719889 TCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAG 2719830 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || || || ||||| || |||||||| || || || ||||| Sbjct 2719829 ATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 2719770 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| ||||| || ||||| ||||| ||||||| |||||||||| Sbjct 2719769 TCAATGGTGTCGGAGCTTTCCACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACG 2719710 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2719709 AAGATCTGCAT 2719699 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || || | || || || || || ||||||||||| || ||| Sbjct 2719661 TCCTTCTGGATGTTGTAATCCGCCAAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAG 2719602 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||||||||||| ||||||||||| || || |||||||| Sbjct 2719601 ATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTG 2719542 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| ||||| || | ||||| ||||| ||||| |||||||| Sbjct 2719541 TCAATGGTGTCAGAGCTC---TCTACCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTC 2719485 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2719484 ACGAAGATCTGCAT 2719471 Score = 113 bits (124), Expect = 1e-19 Identities = 168/237 (71%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | || | ||| ||| || |||||||| || || || Sbjct 2718785 CCACCACGGAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCC 2718726 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||| || || || |||| || || || ||||| || || | ||| ||| || Sbjct 2718725 AACGTACGGCCATCCTCTAGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 2718666 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| || || || ||||| || || | ||| ||| || Sbjct 2718665 ATGCCCTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACC 2718606 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 ||||| ||||| ||||| ||||| |||||||| || || ||||||| | ||||| || Sbjct 2718605 TCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCA-TCTGTTAATC 2718550 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| || | || | ||| ||||| | ||| ||||| |||||| Sbjct 2719433 TCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCAAGTTGCTTTCCGGCGAAG 2719374 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || |||||| || ||||| |||||||| || ||||||||||| Sbjct 2719373 ATCAATCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCCTGGATCTTGGCTTTCACGTTA 2719314 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || ||| || || || | ||||| ||||| ||||| |||||||| Sbjct 2719313 TCAATGGTGTCAGAACTC---TCCACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTC 2719257 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2719256 ACGAAGATCTGCAT 2719243 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || ||||||| ||| || || |||||||| ||||| || Sbjct 2719013 CCACCACGGAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCA 2718954 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || || || ||||| ||||||||||| | ||| || || Sbjct 2718953 AGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGA 2718894 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| || ||||| || || || ||||| || || | || ||| || Sbjct 2718893 ATACCCTCTTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTC---TCC 2718837 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || || || || || ||||| |||||||| Sbjct 2718836 ACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || ||||||| ||| || || ||||| || ||||| || Sbjct 1279210 CCACCACGGAGCCTGAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1279269 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || || || ||||| |||||||||| | ||| || || Sbjct 1279270 AGAGTTCTGCCATCCTCCAACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGA 1279329 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || || ||||| || || || ||||| || || | || ||| || Sbjct 1279330 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTC---TCC 1279386 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || || | ||||||||||| |||||||| Sbjct 1279387 ACCTCAAGAGTAATCGTCTTTCCCGTTAAGGTCTTGACGAAAATCTGCAT 1279436 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||||| | || | || ||||| | ||||||||| |||||| Sbjct 2719205 TCCTTCTGAATGTTGTAGTCGGCCAAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAG 2719146 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || || || || ||||| || ||||| || ||||||||||| Sbjct 2719145 ATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTA 2719086 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || ||| || || || | ||||| || ||||| |||| ||||| Sbjct 2719085 TCAATGGTGTCAGAACTC---TCCACCTCCAAAGTGATAGTTTTCCCAGTCAACGTCTTA 2719029 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2719028 ACGAAAATCTGCAT 2719015 >seq2 Length=19698289 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||| || || |||| ||| ||| || ||||| || || ||||| Sbjct 19344927 CCTCCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 19344868 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||||||||| | || ||||| ||||| |||| ||||| || |||| Sbjct 19344867 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 19344808 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || || || || || || || | || || || || Sbjct 19344807 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 19344748 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||||||||| || || || || ||||| |||||||| Sbjct 19344747 TCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 19344701 >seq5 Length=26975502 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | ||||| || || ||||| || || ||||| || Sbjct 772442 CCACCTCTGAGACGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCA 772501 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||||||| | || || || || ||||| || | ||| ||| ||| Sbjct 772502 AGAGTTCTTCCGTCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGG 772561 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| || |||||||| || ||||| ||||| || |||| || |||| || Sbjct 772562 ATTCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTC---TCA 772618 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || ||||| || |||||||||||||| || || ||||| Sbjct 772619 ACCTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || || ||||||||||| ||||| || Sbjct 6974009 CCACCACGGAGACGAAGGACAAGGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCA 6974068 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 || || | ||| ||||| | || || || ||||| || || | |||| | | | Sbjct 6974069 AGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCCGGA--- 6974125 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||||||||| || |||||||| || || || ||||| || |||| || ||| | Sbjct 6974126 GGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCAATAGTGTCAGAGCT---T 6974182 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || || || || |||||||||||||| || |||||||| Sbjct 6974183 TCAACCTCCAAGGTAATGGTTTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 6974235 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||||| || ||||||||||| || || || || Sbjct 6973781 CCACCTCTCAGACGAAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCA 6973840 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || |||| || || || || ||||| || | ||| || |||| Sbjct 6973841 AGAGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 6973900 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| |||||||| ||||| || ||||| || || || || | || |||| || Sbjct 6973901 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TCA 6973957 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || ||||||||||| || || || ||||| Sbjct 6973958 ACCTCAAGGGTGATTGTTTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007 Score = 105 bits (116), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || || || || || ||||| || || || | ||||| || || || Sbjct 14953325 TTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGACCATCGTCAAGCTGTTTACCAGCAAA 14953384 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||||||| |||| |||||| || || ||||| || ||||| || || Sbjct 14953385 GATTAGTCTCTGTTGATCCGGAGGGACTCCTTCCTTGTCTTGGATCTTAGCTTTAACATT 14953444 Query 288402 TTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| || | | ||| ||||| || || || || || ||||| || |||||| Sbjct 14953445 GTCAATAGTGTC--TGAACTCTCAACTTCAAGGGTAATGGTTTTACCGGTAAGCGTCTTG 14953502 Query 288460 ACGAATATCTGCAT 288473 || ||||||||||| Sbjct 14953503 ACAAATATCTGCAT 14953516 Score = 102 bits (112), Expect = 2e-16 Identities = 164/234 (70%), Gaps = 9/234 (4%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || || |||| || ||||| |||||||| || || || Sbjct 14952830 TCCACCGCGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATATTGTAATCCGC 14952889 Query 288306 GAGCGTGCGT---CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | ||| || ||||| | || | ||||| ||||| || | |||||| Sbjct 14952890 TAAAGTGTAATAACCATCTTCAAGCTGCTCGCCTGCAAAGATTAGCCTCTGTTGGTCCGG 14952949 Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | |||| | |||||| ||||| || || || ||||| || || || | ||| |||| Sbjct 14952950 TTGGATCCTTTCTTTGTCCTGAATCTTGGCCTTCACATTGTCAATCGTATCAGAGCTC-- 14953007 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| ||||| || |||| ||| ||||| ||||||||||| Sbjct 14953008 -TCCACTTCAAGTGTGATGGTCTTTCCCGTCAAAGTGTTGACAAATATCTGCAT 14953060 Score = 84.2 bits (92), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || | |||| || || || ||||| || || || || Sbjct 6973324 TCCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGC 6973383 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || || || | || || || |||||||| || | |||||| ||| Sbjct 6973384 AAGAGTCCGACCATCCTCAAGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGG 6973443 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| ||||| || ||||| || || || || || || || || | || |||| || Sbjct 6973444 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTC---TC 6973500 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || ||||| || ||||| || ||||||||||| Sbjct 6973501 AACCTCAAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAATATCTGCAT 6973551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654294199746