Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 seq4 131 2e-25 seq1 104 2e-17 seq2 100 3e-16 seq3 86.0 6e-12 >seq5 Length=26975502 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||| || | |||||||| | || || ||||| ||||| ||||||||| || Sbjct 772670 CCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCC 772729 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| ||||||||||| || ||| | || |||| |||||||| ||||| Sbjct 772730 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGA 772789 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| ||| | | || ||| | | |||| |||||| | ||||| || Sbjct 772790 ATGCCTTCCTTGTCC-TGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 772848 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| || || ||||| || || || ||||| Sbjct 772849 CTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||| | ||| | |||||||| ||||| || |||||||| | Sbjct 6973553 CCACCACGGAGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCG 6973612 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || |||||||||||||| | || | || ||||||||| || || Sbjct 6973613 AGTGTGCGTCCATCTTCAAGCTGTTTTCCAGCAAATATGAGTCTCTGCTGATCTGGTGGA 6973672 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||| | ||| | | || ||||| | |||| ||||| | ||||| || Sbjct 6973673 ATCCCTTCCTTGT-CTTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCAAC 6973731 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || | || || |||||||||||||| Sbjct 6973732 CTCCAAAGTGATAGTCTTGCCAGTTAAGGTCTTCACAAAAATCTGCAT 6973779 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||| || | || ||||| || || || |||||||| | Sbjct 771985 TCCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGC 772044 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || ||||||||||||||| |||| | || ||| || || || || Sbjct 772045 AAGTGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 772104 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| || || ||||| | |||| |||||| | || || || Sbjct 772105 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTTTCAAC 772164 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| || || || ||||| |||||||| Sbjct 772165 CTCCAGAGTAATGGTCTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 772212 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||||||| | || ||||||||||| || |||||||| | | |||||| ||| || Sbjct 6973798 CACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCAAGAGTGCGACCATCCTC 6973857 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||| || || || |||| | | |||||| || || || || ||||| || || Sbjct 6973858 TAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTG 6973917 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || |||| | || | |||||| | ||||| || || | ||| | ||||| Sbjct 6973918 GATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATTGTTTT 6973977 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| || ||||| || ||||| Sbjct 6973978 ACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007 >seq4 Length=18585056 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | |||||||| || || || ||||| ||| ||| || ||| ||| || Sbjct 1278771 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTC 1278830 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||||||||||||| |||| | |||||||| || ||||| || || ||||||||| Sbjct 1278831 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 1278890 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||| | |||| || | |||||| | ||||| ||||| | || | || | Sbjct 1278891 GATCTTAGCCTTCACGTTG-TCAATGGTGTCGGAGCTCTCAACTTCAAGAGTAATGGTCT 1278949 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || ||||| || || ||||||||||| Sbjct 1278950 TTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || || || ||||||||||| ||| ||| || ||| ||| Sbjct 1279456 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 1279515 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||||||||| ||| | || | | ||||||||| ||||| ||||| ||||| ||| | Sbjct 1279516 AGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGG 1279575 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| |||| |||||| | || || || |||| ||| | || || Sbjct 1279576 ATCTTGGCCTTAACGTTG-TCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTT 1279634 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || ||||| |||||||| Sbjct 1279635 TCCGGTGAGAGTCTTAACAAAGATCTGCAT 1279664 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || || || ||||||||||| ||| ||| || ||| ||| Sbjct 2718767 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCATCCTCT 2718708 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || ||| | || | | ||||||||| ||||| ||||||||||| ||| | Sbjct 2718707 AGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGG 2718648 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| |||| |||||| | || || || |||| ||| | || || Sbjct 2718647 ATCTTGGCCTTAACGTTG-TCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTT 2718589 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || ||||| |||||||| Sbjct 2718588 TCCGGTGAGAGTCTTAACAAAGATCTGCAT 2718559 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| |||||||| | ||||||||| || || || |||||||| ||| || | Sbjct 2588518 CGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCCAAAGTTCTGCCG 2588577 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || || || ||||| ||| ||||||| | |||||| || ||||| || |||||||| Sbjct 2588578 TCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTA 2588637 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| || ||||| ||||| | | |||||| | ||||| || || | || | Sbjct 2588638 TCTTGGATCTTGGCCTTGACGTTGT-CAATGGTGTCAGAGCTCTCCACCTCAAGAGTAAT 2588696 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || || || || ||||| || ||||||||||| Sbjct 2588697 CGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||| || ||||| ||||| || ||| || | | | Sbjct 1278994 CGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTACCA 1279053 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || || |||||||| ||| ||||||||| |||||| || || || || ||||| ||| Sbjct 1279054 TCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCTTTG 1279113 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || |||| | |||| ||||| | ||||| || || | || | Sbjct 1279114 TCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCCACCTCCAAAGTGATA 1279173 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || |||| || || ||||| |||||||| Sbjct 1279174 GTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || || || ||||||||||| ||| |||||| ||| || Sbjct 2588752 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCCGCCAACGTGCGGCCATCCTCC 2588811 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| ||||| ||| |||| | | ||||||||| ||||| || || ||||| ||| | Sbjct 2588812 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCCTGG 2588871 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| |||| |||||| | || || || |||| ||| | || || Sbjct 2588872 ATCTTGGCCTTAACGTTG-TCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTT 2588930 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || || || |||||||| Sbjct 2588931 TCCGGTGAGAGTCTTAACGAAGATCTGCAT 2588960 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| ||||| || | || ||||| || ||||| ||||| ||| ||| || | | Sbjct 2719229 CGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCCAAAGTTCTGCCA 2719170 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || || |||||||| ||| ||||||||| |||||| || ||||| || ||||| ||| Sbjct 2719169 TCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTTG 2719110 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || || | | || | |||||| | |||||| || || | || | Sbjct 2719109 TCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCACCTCCAAAGTGATA 2719050 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || |||| || || || ||||||||||| Sbjct 2719049 GTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | || ||||| || || || |||||||| ||| || ||| | Sbjct 2719685 CGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTACGACCA 2719626 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | |||||||| || ||||||| | |||||| || ||||| || || ||||| Sbjct 2719625 TCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTA 2719566 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||| | |||| || | |||||| | ||||| || || | || | Sbjct 2719565 TCCTGGATCTTGGCCTTCACGTTG-TCAATGGTGTCAGAGCTCTCTACCTCCAAAGTGAT 2719507 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| ||||| || || || |||||||| Sbjct 2719506 AGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || | ||| |||||| Sbjct 1279240 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTGCTTTCCA 1279299 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | |||||| || ||||| || ||||||||||| ||| || |||| Sbjct 1279300 GCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGCCTTG 1279359 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | |||||| || || | || | ||| || || || | || Sbjct 1279360 ACGTTG-TCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTCCCGTTAAGGT 1279418 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 1279419 CTTGACGAAAATCTGCAT 1279436 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| || | | || | ||| || | ||| ||||| Sbjct 2718983 GTGGACTCCTTCTGGATATTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTGCTTTCCG 2718924 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| | |||||| || ||||| || ||||| ||||| ||| || |||| Sbjct 2718923 GCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTGGCCTTG 2718864 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||| | |||||| || || | || | ||| || || || || || Sbjct 2718863 ACGTTGT-CGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTCCCGTTAGGGT 2718805 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || ||||||||||| Sbjct 2718804 TTTAACGAAAATCTGCAT 2718787 >seq1 Length=30427671 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | || | || ||||| ||||| || |||||||| | Sbjct 20549987 CCACCACGAAGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCA 20549928 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| || |||| | || ||| || || || || Sbjct 20549927 AGAGTCCGACCATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 20549868 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || |||||| || || ||| || | |||| || || | ||||| ||| Sbjct 20549867 ATCCCTTCTTTGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACT 20549808 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||||||||| || || || || ||||||||||| Sbjct 20549807 TCTAGGGTAATGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||||||| | || ||||| ||||| || |||||||| | | |||||| || || Sbjct 24277066 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGACCGTCTTC 24277125 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || || |||| | | ||||||||| ||||| || || ||||| ||| Sbjct 24277126 AAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 24277185 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || ||| | | || | || || | ||| || || || | || | ||||| Sbjct 24277186 GATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTT 24277245 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| |||| ||| || |||||||||||||| Sbjct 24277246 GCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | || | ||||||||||| || || |||||||| || Sbjct 24276596 CCACCACGAAGACGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCC 24276655 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || |||||||| ||||| |||| | || ||| || || || || Sbjct 24276656 AAAGTCCTTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 24276715 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || | ||||| ||| ||| | | || |||| | || | ||||| | ||||| || Sbjct 24276716 ATCCATTCCTTATCC-TGAATCTTAGCTTTGACATTATCAATTGTGTCTGAGCTCTCAAC 24276774 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| |||| |||||| ||||| || ||||| Sbjct 24276775 CTCCAAGGTAATGGTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || |||||||| |||||| |||| | || ||| || || || || || |||||||||||| Sbjct 24276443 TCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCCTCCTTGTCC 24276502 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 || || ||||| | |||| ||| | | ||||| || || | ||| | || Sbjct 24276503 TGTATCTTAGCCTTGACGTTATCGATTGTGCCTGAGCTCTCAACCTCCAAGGTAATTGTC 24276562 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||| |||||| ||||| || ||||| Sbjct 24276563 TTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276594 >seq2 Length=19698289 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| || || || || || ||||||||| | | || || || || ||||| ||||| Sbjct 19344898 CGTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCC 19344839 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| | |||||||||||||| || || || || || |||||||| ||| || ||| Sbjct 19344838 GGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTT 19344779 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | |||| |||||| | |||||| |||| || | ||| || || || || || Sbjct 19344778 GACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGT 19344719 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 19344718 TTTCACGAAGATCTGCAT 19344701 >seq3 Length=23459830 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | || | ||| | ||| || || || || || ||||| ||| Sbjct 23037367 GCACCACCACGGAGACGGAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCG 23037308 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | || || || || |||||||| || ||| | |||||||||||||| || || Sbjct 23037307 GCGAGGGTACGGCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGT 23037248 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || |||||||| ||| ||| ||| | | |||| |||||| | || Sbjct 23037247 GGGATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCA 23037188 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | || || || || || ||||| || || |||||||| Sbjct 23037187 ACCTCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 23037138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500758393680