Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 2e-24
seq4 125 6e-24
seq5 104 2e-17
seq3 100 3e-16
seq1 96.9 3e-15
>seq2
Length=19698289
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| ||||| | | || || || |||||||||||||| ||||| || ||||||
Sbjct 19344927 CCTCCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 19344868
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || || | || ||||| ||| | |||||||| ||||||||||| ||
Sbjct 19344867 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 19344808
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || |||| || | |||||| || ||||||||
Sbjct 19344807 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 19344748
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||||||| | ||| || || ||||| ||||| || || || ||||||
Sbjct 19344747 TCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 19344700
>seq4
Length=18585056
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || |||||||| | || ||||| || || || ||||| |||||||| || ||
Sbjct 2719016 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCA 2718957
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| || ||||| ||| | |||| | |||||||||||
Sbjct 2718956 GCAAGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGA 2718897
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || ||||| ||||| || || |||| || | || | |||||| ||| |||
Sbjct 2718896 GGAATACCCTCTTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTCTC 2718838
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||| || || ||||| ||||| || ||||| |||||
Sbjct 2718837 CACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | ||| || | ||| ||||| || ||||| ||||| || |||||
Sbjct 2588503 ATACCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCC 2588562
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | || || | ||| ||||| ||| | ||||| | |||||||||||
Sbjct 2588563 GCCAAAGTTCTGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 2588622
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || |||||||| || || |||| || | || | |||||| || |||
Sbjct 2588623 GGAATACCCTCCTTATCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTCTC 2588681
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||| || || ||||| ||||| || ||||| |||||
Sbjct 2588682 CACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || |||||||| | || ||||| || || || ||||| ||||| || || ||
Sbjct 1279207 ATACCACCACGGAGCCTGAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCA 1279266
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| || ||||| ||| | ||||| | |||||||||||
Sbjct 1279267 GCAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGA 1279326
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || || ||||| || || |||| || | || | |||||| ||| |||
Sbjct 1279327 GGAATACCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTCTC 1279385
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||| || || |||| || || || ||||| |||||
Sbjct 1279386 CACCTCAAGAGTAATCGTCTTTCCCGTTAAGGTCTTGACGAAAATCTGCAT 1279436
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | ||| || | || || || || ||||| || || || || |||
Sbjct 2719244 ATACCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCG 2719185
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | ||||||||| ||| | ||||||| |||||||||||
Sbjct 2719184 GCCAAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGA 2719125
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || ||||| ||||| || || ||| | || | || | |||||| ||| |||
Sbjct 2719124 GGAATACCCTCTTTGTCTTGGATCTTGGCTTTCA-CGTTATCAATGGTGTCAGAACTCTC 2719066
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | ||||| || || | || || || ||||| |||||
Sbjct 2719065 CACCTCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | |||||| | || || || || ||||| ||||| || |||||
Sbjct 2719700 ATACCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 2719641
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| |||||||||||||| || | ||||| | |||||||||||
Sbjct 2719640 GCCAAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGA 2719581
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| ||||| || || || || | || | || | |||||| || |||
Sbjct 2719580 GGGATTCCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTC 2719522
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || || ||||| ||||| || || || || |||||
Sbjct 2719521 TACCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || |||||||| | ||| | || || || || ||||| ||||| || || |||
Sbjct 1278754 CCACCACGGAGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCC 1278813
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || | ||| || | |||||||| ||| | || | || ||||||||||| ||
Sbjct 1278814 AAAGTACGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 1278873
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| ||||| || || || || || || | || | || | ||||||||| ||| ||
Sbjct 1278874 ATACCTTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTCTCAAC 1278932
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||||| || || || || ||||| || || ||||| |||||
Sbjct 1278933 TTCAAGAGTAATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| |||||||| |||||
Sbjct 1279435 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 1279494
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | ||| || | |||||||| ||| | || | | ||||| |||||
Sbjct 1279495 GCCAACG-TACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGG 1279553
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| ||||| || | | || | | | || | || | |||||| || |
Sbjct 1279554 AGGAATGCCTTCCTTATCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 1279612
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || ||||| || | || || ||||| ||||| || ||||| || ||||||
Sbjct 1279613 CCACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCATC 1279665
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | |||||| | || || || || ||||| || || || || ||
Sbjct 1278979 ATACCTCCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCA 1279038
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || ||| || | ||||||||| ||| | ||||||| |||||||||||
Sbjct 1279039 GCCAAAGTTCTACCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGT 1279098
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || ||||| || || || || ||||| || | ||||| || |||
Sbjct 1279099 GGGATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCC 1279158
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || || || || | || || ||||| || |||||
Sbjct 1279159 ACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | ||| || | || || || || ||||| || || || || ||
Sbjct 2719472 ATACCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTCA 2719413
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | ||| ||||| ||| | ||||||| |||||||||||
Sbjct 2719412 GCCAAAGTTCTTCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGT 2719353
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || ||||| || || || || ||| | || | || | |||||| ||| |||
Sbjct 2719352 GGGATACCCTCTTTGTCCTGGATCTTGGCTTTCA-CGTTATCAATGGTGTCAGAACTCTC 2719294
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || || ||||| ||||| || || || || |||||
Sbjct 2719293 CACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243
>seq5
Length=26975502
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || |||||||| || || || || |||||| | ||| ||| || | ||
Sbjct 772693 ATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGGCCATCTTCTAGCTG 772752
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
||| || ||| |||| |||| |||||| ||||| ||||||||||| || || ||||| ||
Sbjct 772753 TTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTT 772812
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| || ||| || |||||||| | || ||||| ||
Sbjct 772813 TGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATAGTCTTGCCAGT 772872
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || || |||||||||
Sbjct 772873 GAGTGTTTTCACGAAGATTTGCATC 772897
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||| || ||||| || ||||| | ||| ||| || | ||
Sbjct 6974261 TGGAGTGTTGATTCTTTCTGGATGTTGTAATCAGCCAAGGTGCGGCCATCTTCTAGCTGC 6974320
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | ||||||| ||||||||| || ||||||||||| || || || || |||
Sbjct 6974321 TTACCAGCGAAGATCAATCTTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTT 6974380
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | |||||| || ||| || |||||||| | || || || ||
Sbjct 6974381 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTACCAGTG 6974440
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 6974441 AGTGTTTTCACGAAAATTTGCATC 6974464
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| ||||| || || || ||||||||||| || |||||
Sbjct 6973550 ATACCACCACGGAGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCA 6973609
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| || | |||||||| || |||| | || ||||| || ||
Sbjct 6973610 GCGAGTGTGCGTCCATCTTCAAGCTGTTTTCCAGCAAATATGAGTCTCTGCTGATCTGGT 6973669
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| ||||| || |||||||| ||| |||| || | ||||| || |||
Sbjct 6973670 GGAATCCCTTCCTTGTCTTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCA 6973729
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || ||||| |||| || || |||||||| |||||
Sbjct 6973730 ACCTCCAAAGTGATAGTCTTGCCAGTTAAGGTCTTCACAAAAATCTGCAT 6973779
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| ||||| || || || ||||||||||| || |||||
Sbjct 772211 ATACCACCACGGAGACGAAGCACAAGATGAAGTGTCGACTCCTTTTGGATGTTGTAATCT 772270
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || || | || | | ||||| |||||
Sbjct 772271 GCAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGA 772330
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || ||||||||||| || || ||||| || | |||||| ||| |||
Sbjct 772331 GGAATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCTGAACTCTCA 772390
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||| || || || || || ||||| ||||||||
Sbjct 772391 ACCTCAAGGGTGATTGTTTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 772440
>seq3
Length=23459830
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || ||||| ||||| |||||||| ||||| || || ||| |
Sbjct 23037364 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 23037305
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || || | ||||| || ||| | |||||||| ||||||||||| ||
Sbjct 23037304 AGGGTACGGCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 23037245
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || || | || | ||||||||| || || ||
Sbjct 23037244 ATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACC 23037185
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || | || || || ||||| ||||| || || || ||||||
Sbjct 23037184 TCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 23037137
>seq1
Length=30427671
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTCCAATT 45195
||| ||||| || || || ||||| || ||||| ||| | ||| | ||| |||||||
Sbjct 8315143 ATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCT-AGTGTTCTTCCATCTTCCAATT 8315085
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
||||||| ||| | ||||| |||||||| ||||| || || ||||| || ||||| || |
Sbjct 8315084 GTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCT 8315025
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| ||| | || | ||||| || || || || || | || | || || || |
Sbjct 8315024 TCGCTTTCACATTGTCGATTGTGTCTGATGATTCTACCTCTAAGGTTATTGTCTTCCCCG 8314965
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
|||| ||||| || || || |||||
Sbjct 8314964 TTAGGGTTTTCACGAAGATCTGCAT 8314940
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| |||| ||| || || || ||||| ||||||||||| || |||||
Sbjct 20549534 ATCCCACCACGGAGTCTCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCT 20549475
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || ||| |||| | || || || |||||
Sbjct 20549474 GCAAGAGTGCGACCATCCTCAAGCTGTTTACCCGCGAATATTAGTCTCTGTTGATCCGGA 20549415
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || ||||| || || ||| | || | ||||| | | |||
Sbjct 20549414 GGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGTACTCTCA 20549355
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| |||| ||||| || || || || || || |||||
Sbjct 20549354 ACTTCTAGGGTAATGGTTTAACCGGTAAGGGTCTTGACGAATATCTGCAT 20549305
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || ||| || || || ||||| ||||||||||| || |||||
Sbjct 20549990 ATCCCACCACGAAGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCT 20549931
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | || |||||||| | || | || || ||||| ||
Sbjct 20549930 GCAAGAGTCCGACCATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGT 20549871
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || |||||||| || ||||| || || | || | || || || |||
Sbjct 20549870 GGGATCCCTTCTTTGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCA 20549811
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| || |||| ||||||||||| || || || || ||||| ||||||
Sbjct 20549810 ACTTCTAGGGTAATGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCATC 20549760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003160449720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |