Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 5e-26
seq5 122 9e-23
seq2 116 4e-21
seq4 102 8e-17
seq1 100 3e-16
>seq3
Length=23459830
Score = 132 bits (146), Expect = 5e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 38239 aaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298
|||| ||||| || ||||| ||||| || ||||| || ||||| ||| | || || ||
Sbjct 23037133 AAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTTGAAT 23037192
Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
| |||||| | | | | | || | || |||| ||||| || ||||| || | |
Sbjct 23037193 CATCCGACACCATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAAGGAATCCCACCGG 23037252
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||| | |||| ||| || |||||||| || |||| || |||||| |||||
Sbjct 23037253 ACCAGCAGCGATTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACCCTCGCCGACT 23037312
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||| |||||| ||||||| ||| | || || |||
Sbjct 23037313 ACAACATCCAGAAGGAATCGACGCTTCATCTCGTCCTCCGT 23037353
Score = 111 bits (122), Expect = 2e-19
Identities = 180/256 (70%), Gaps = 5/256 (2%)
Strand=Plus/Plus
Query 133188 ATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCT 133246
|||||| |||||||| | ||| || || ||||| || || ||||| ||||||| ||||||
Sbjct 9980716 ATACATCTCCGAGTGGATGTTTTCAATCGCGATCTGGAAACCGTAGAAAGCAC-GCGCCT 9980774
Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306
| || || || || ||| || | ||||| || ||||| |||||
Sbjct 9980775 CAGAGACTTGAACATCGGACATGAAGCGAGAAGCGAGATTCTCTAGTACGATTCCGTCAG 9980834
Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT 133366
|| ||||| || || || ||||| |||||||| || || || |||||| | | |
Sbjct 9980835 ATGCAGCGAAGAAAGCGAGGACGTGTTTGATGAAGTGACGTTCACCGTCGTTGAGACTGT 9980894
Query 133367 ---CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423
|||||||||| |||| | || || || || || ||| ||||||| || || || |
Sbjct 9980895 TTTCCCAGTCGCGGTTGTCTTGTGATAGATCTACTTCTTCGGCGGTCCAGAATGATGCTT 9980954
Query 133424 CGGCTTTTTTGTACAT 133439
||||||||||||||||
Sbjct 9980955 CGGCTTTTTTGTACAT 9980970
>seq5
Length=26975502
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || ||||| ||||| |||||| | || || ||| | |
Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || |||| || ||||||||||| || | |||||
Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6973888
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || || || ||||| || || | ||||| || || ||||||
Sbjct 6973887 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 6973828
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| || | || || ||||||||||| ||| ||||||| ||
Sbjct 6973827 ATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGG 6973781
Score = 113 bits (124), Expect = 5e-20
Identities = 367/562 (65%), Gaps = 15/562 (3%)
Strand=Plus/Minus
Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948
||||| ||||| || || || || | || ||||| || ||||| | |||||| |||
Sbjct 16408801 ATCAAACAAGCGAAATCACAGTGAAGACCTTCGTCTCTCGAAATCAATTCGTTTGAAAAA 16408742
Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008
|| | || ||||| | || ||||| || | ||| ||||| | || || || ||
Sbjct 16408741 GTGAGTCCAGGCATTAAACCTCGTTTCTTCAACCAGAATATCGAACAAAAGCTACCGGAG 16408682
Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068
||||| | || || ||| || || || || | | ||| |||| |||| | |
Sbjct 16408681 AAGAATATACCTTCAACGCAAGCAAACGCTACGATTCTCTCAGCGAA----GCTT-TGAG 16408627
Query 133069 CT--GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126
| | |||||| || |||||||| || |||| | | | || || || |||||||
Sbjct 16408626 ATCCGTTGATCCATTTCATAGCCCATTCTGCTTTTT--TCGTCACAAGGAATGGTTTCGA 16408569
Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCG 133186
| || || | | | | |||||| | | || ||||||| |||
Sbjct 16408568 TTGCACGAAAAAGATGATCTCTCTCTTTGTTGTCTTTGATATACGTGTCGAGAAGGAGAC 16408509
Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246
|||||| || ||||| | ||||| || |||||||| || ||||| ||| || || |
Sbjct 16408508 TATACATCTCGGAGTGAATATTCTCAATCGCGATTTGGAATCCGTAGAAGGCACGAGCTT 16408449
Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCCGTCG 133305
| | ||| || || ||| | | || ||||| ||| ||||| |||||
Sbjct 16408448 CTGAGATCTGAACATCGGACATGAATCTAGTTGAG-AGATTCTCGAGAACGATTCCGTCT 16408390
Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AG 133362
|||||||| ||||| || ||||| || ||||| || || |||| || | | | ||
Sbjct 16408389 GATGCGGCGAAGAAGGCGAGGACGTGTTTAATGAAGTGACGTTCGTCGTTGGTTAGTGAG 16408330
Query 133363 CGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCC 133422
||||||||||| |||| | || || || || || ||| | ||||| || || ||
Sbjct 16408329 TTTTCCCAGTCGCGATTGTCTTGAGAGAGATCGACTTCTTCGGCTGTCCAGAAGGATGCT 16408270
Query 133423 TCGGCTTTTTTGTACATACTCC 133444
|||||||| |||||||| ||||
Sbjct 16408269 TCGGCTTTCTTGTACAT-CTCC 16408249
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || ||||| || ||||| |||||| | || || ||| |
Sbjct 772440 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCA 772381
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || |||| || |||||||||||||| | || ||
Sbjct 772380 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAG 772321
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || || || ||||| || || | |||||||| || ||||||
Sbjct 772320 CAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAAC 772261
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| |||| || ||| | ||||| |||
Sbjct 772260 ATCCAAAAGGAGTCGACACTTCATCTTGTGCTTCGT 772225
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| ||||| || || |||||||| |||| || ||| | |
Sbjct 6974463 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCT 6974404
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||| | ||| |||| ||||| || || ||||| | |||||
Sbjct 6974403 GACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 6974344
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | | || | ||| || || ||||| || || | |||||| | || ||||||
Sbjct 6974343 CAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAAC 6974284
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| || ||| | || || || ||||| || | || ||||| ||
Sbjct 6974283 ATCCAGAAAGAATCAACACTCCACTTGGTTCTCAGGTTAAGAGGTGG 6974237
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || || ||||| ||||| || | || || ||| | |
Sbjct 772668 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 772609
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | |||| ||| |||| ||||| || ||||| || | || ||
Sbjct 772608 GACACTATTGACAACG-TCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCA 772550
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || || | || || || ||||| || |||| | || || ||||||||
Sbjct 772549 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAA 772490
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| |||||||| |||| || ||||||||||| ||| | ||||| ||
Sbjct 772489 CATTCAAAAGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGG 772442
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || ||||| || || |||||||| ||| | || || ||| |
Sbjct 14953516 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 14953457
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | |||||| || |||| ||||| || ||| | || | || |||
Sbjct 14953456 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAA 14953397
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | || || |||||||| ||||| | ||||| || || ||||||
Sbjct 14953396 CAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAAC 14953337
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| || ||| | || || || ||||| || | |||||||| ||
Sbjct 14953336 ATCCAGAAAGAATCAACTCTCCACTTGGTTCTCAGGTTGAGAGGTGG 14953290
>seq2
Length=19698289
Score = 116 bits (128), Expect = 4e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
||||| ||||| || ||||| ||||| || ||||| || || ||||| |||| ||||||
Sbjct 19344695 AAAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAG 19344754
Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357
|| | |||| | | | | | || | || |||| ||||| || ||||| || |
Sbjct 19344755 TCCTCTGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCG 19344814
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
||||| ||||| | |||| ||| || || ||||| || |||| || ||| | |||
Sbjct 19344815 GACCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGTACCTTAGCCGAT 19344874
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| |||||| | ||||| || | || || |||
Sbjct 19344875 TACAACATCCAGAAGGAATCAACGCTTCACCTTGTCCTTCGT 19344916
>seq4
Length=18585056
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||| || | || || ||| | ||
Sbjct 1278980 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCC 1278921
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || || || | |||||
Sbjct 1278920 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCA 1278862
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || |||||||| || || | || || | |||||||||
Sbjct 1278861 GCAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAA 1278802
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || || || ||||||||
Sbjct 1278801 CATCCAGAAGGAGTCTACCCTTCACTTGGTGCT 1278769
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || |||||||| || | || || || |||||||| | || || ||| | ||
Sbjct 2588504 ATGCAGATCTTCGTAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCC 2588445
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || ||||| | |||||
Sbjct 2588444 GACACCATTGATAACG-TGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 2588386
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | || || | |||||||||
Sbjct 2588385 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAA 2588326
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| || |||
Sbjct 2588325 CATCCAGAAGGAGTCTACTCTTCACTTGGTCCTCCGT 2588289
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || ||||||||| | || || || | ||
Sbjct 2719699 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCC 2719758
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || ||||| | |||||
Sbjct 2719759 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 2719817
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | || || | |||||||||
Sbjct 2719818 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAA 2719877
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| ||||||
Sbjct 2719878 CATCCAGAAGGAGTCTACTCTTCACTTGGTCCTGCGT 2719914
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || ||||| || || || || | || || ||| | |
Sbjct 2588732 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCT 2588673
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || ||||| ||||| | |||||
Sbjct 2588672 GACACCATTGACAACG-TCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCA 2588614
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || || || || || |||| | || | || |||||
Sbjct 2588613 GCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGCAGAACTTTGGCGGATTACAA 2588554
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | ||||| |||||||| ||||| || | || ||
Sbjct 2588553 CATCCAGAAGGAGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGG 2588506
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||| | || || ||||| ||||| | || || ||| |
Sbjct 2719015 ATGCAGATTTTCGTTAAGACGTTGACTGGGAAAACTATCACTTTGGAGGTGGAGAGTTCT 2719074
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| ||||||||||| ||||| | |||||
Sbjct 2719075 GACACCATTGATAACG-TGAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCA 2719133
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | | || | ||| || ||||| || || || | | || | |||||||||
Sbjct 2719134 GCAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTTTGGCCGACTACAA 2719193
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| | || || || ||||| ||||| || | || ||
Sbjct 2719194 CATTCAGAAGGAGTCCACACTCCACTTGGTCTTGCGTCTGCGTGGAGG 2719241
>seq1
Length=30427671
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| |||||||| || || || || || ||||||| ||| | || || ||| ||
Sbjct 20549305 ATGCAGATATTCGTCAAGACCCTTACCGGTTAAACCATTACCCTAGAAGTTGAGAGTACA 20549364
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | |||||| || |||| ||||| || ||||| || | || |||
Sbjct 20549365 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCAA 20549424
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | |||||| |||||||| || || | ||||| || || ||||||
Sbjct 20549425 CAGAGACTAATATTCGCGGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACAAC 20549484
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
||||||||||| | || || || | ||||||
Sbjct 20549485 ATCCAAAAGGAGTCAACACTTCACCTTGTGCTG 20549517
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
|| |||||||| || ||||| ||||| || ||||| || || || ||| | || || ||
Sbjct 8314934 AAGAAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAA 8314993
Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357
| | |||| | | | | |||| || |||| ||||| || ||||| || |
Sbjct 8314994 TCATCAGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCG 8315053
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
|| || || ||| | || | ||| || ||||| |||| || | | || || ||
Sbjct 8315054 GATCAGCAACGGTTGATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTAGCTGAT 8315113
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||| || || ||||||| |||||||| || ||| ||||||| ||
Sbjct 8315114 TACAACATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGG 8315166
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || |||||||||||||| | || || || |
Sbjct 24277275 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 24277216
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | |||| | || |||| || || || ||||| || | || ||
Sbjct 24277215 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 24277156
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || || || ||||| || |||| ||||| ||| || ||||||
Sbjct 24277155 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 24277096
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||| | || || ||||||||||| ||| | ||||| ||
Sbjct 24277095 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTCAGAGGTGG 24277049
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||||||||| ||| | || || ||| | |
Sbjct 20549761 ATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCT 20549820
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | || || | || || | |||||||| || || || | ||||||
Sbjct 20549821 GATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCAA 20549880
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | ||||| | || || || ||||| || || | || || || || ||||||
Sbjct 20549881 CAGAGACTCATCTTTGCAGGAAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTACAAC 20549940
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || || || | |||||||||
Sbjct 20549941 ATCCAAAAGGAGTCAACACTTCACCTTGTGCTGCGT 20549976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172756234880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |