Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 1e-26
seq1 134 1e-26
seq5 132 4e-26
seq3 116 3e-21
seq2 109 5e-19
>seq4
Length=18585056
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || ||||| || | || ||||| | |
Sbjct 2719471 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACTATCACTTTGGAGGTAGAGAGCTCT 2719530
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || |||||||| ||||| || ||
Sbjct 2719531 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCGGACCAG 2719590
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| ||||| |||||||| | | || | ||||| |||
Sbjct 2719591 CAGAGGTTGATCTTTGCCGGAAAACAATTGGAGGATGGTCGTACTTTGGCGGATTACAAC 2719650
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || |||||||||||||| |||| |||||
Sbjct 2719651 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTGCGTGGAGG 2719697
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || |||| ||| | || || |||||||| || | || || || |
Sbjct 2719015 ATGCAGATTTTCGTTAAGACGTTGACTGGGAAAACTATCACTTTGGAGGTGGAGAGTTCT 2719074
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||||||||||||||| || || ||||| || ||
Sbjct 2719075 GACACCATTGATAACGTGAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2719134
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| ||||| || || ||| |||| || | || || |||
Sbjct 2719135 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTTTGGCCGACTACAAC 2719194
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || ||||| |||||||| ||||| |||| |||||
Sbjct 2719195 ATTCAGAAGGAGTCCACACTCCACTTGGTCTTGCGTCTGCGTGGAGG 2719241
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || ||| | || || || ||||| || | || || || | |
Sbjct 1279208 ATGCAGATCTTTGTCAAGACGTTGACTGGAAAGACTATCACTTTGGAGGTGGAGAGCTCT 1279149
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||| |||||||| || || || || || ||
Sbjct 1279148 GACACTATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAG 1279089
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| ||||| || || ||| |||| || | || || |||
Sbjct 1279088 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGTAGAACTTTGGCTGACTACAAC 1279029
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || ||||| |||||||||||||| | || |||||
Sbjct 1279028 ATTCAGAAGGAGTCTACACTTCACTTGGTGTTGCGTCTCCGTGGAGG 1278982
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || ||||| || ||||| || ||||| || ||| | |
Sbjct 1279665 GATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTC 1279606
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || |||| ||| | |||||||| || || ||||| || ||||| ||||
Sbjct 1279605 TGACACCATCGACAACGTTAAGGC-CAAGATCCAGGATAAGGAAGGCATTCCTCCGGATC 1279547
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | | || || ||||| |||||||| |||||| | | || | ||||| |
Sbjct 1279546 AGCAGAGGCTTATTTTCGCCGGAAAACAGCTAGAGGATGGCCGTACGTTGGCTGATTACA 1279487
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
| || || |||||||| || || ||||||||
Sbjct 1279486 ATATCCAGAAGGAATCCACCCTCCACTTGGT 1279456
Score = 120 bits (132), Expect = 3e-22
Identities = 162/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 24692 CTGATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAA 24751
|||||| | | |||||||||||| |||| || || ||||| || ||||| || |||||
Sbjct 2588971 CTGATTAACA-GATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAG 2588913
Query 24752 GTAGAAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAAT 24810
|| ||| | | ||||| | || |||| ||| | |||||||| || || ||||| ||
Sbjct 2588912 GTGGAAAGCTCTGACACCATCGACAACGTTAAGGC-CAAGATCCAGGATAAGGAAGGTAT 2588854
Query 24811 ACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT 24870
||||| ||||| || | | ||||| ||||| || ||| |||||||| | | |
Sbjct 2588853 TCCTCCGGATCAGCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGCACGTT 2588794
Query 24871 GTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
| | ||||| || || || |||||||| || || ||||||||
Sbjct 2588793 GGCGGATTACAATATCCAGAAGGAATCCACCCTCCACTTGGT 2588752
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || ||||||| ||||| || || || ||||| || || || || | |
Sbjct 2588732 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCT 2588673
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || ||||| || ||
Sbjct 2588672 GACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAG 2588613
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| || || || ||||| |||| || | ||||| |||
Sbjct 2588612 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGCAGAACTTTGGCGGATTACAAC 2588553
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || ||||| ||||| |||| |||||
Sbjct 2588552 ATCCAGAAGGAGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGG 2588506
Score = 114 bits (126), Expect = 1e-20
Identities = 161/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 24692 CTGATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAA 24751
|||||| | | ||||||||||||| |||| || || ||||| || || || || |||||
Sbjct 2718548 CTGATTAACA-GATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACAATCACCCTCGAG 2718606
Query 24752 GTAGAAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAAT 24810
|| ||| | ||||||| | || |||| ||| | |||||||| || || || || ||
Sbjct 2718607 GTGGAAAGCTCCGACACCATCGACAACGTTAAGGC-CAAGATCCAGGATAAGGAGGGCAT 2718665
Query 24811 ACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT 24870
||||| ||||| || | | || || ||||| || ||||| |||||| | | |
Sbjct 2718666 TCCTCCGGATCAGCAGAGGCTTATTTTCGCCGGCAAGCAGCTAGAGGATGGCCGTACGTT 2718725
Query 24871 GTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
| | ||||| || || || |||||||| || || ||||||||
Sbjct 2718726 GGCTGATTACAATATCCAGAAGGAATCCACCCTCCACTTGGT 2718767
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || | || || || |
Sbjct 2719243 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCACTTTGGAGGTGGAGAGTTCT 2719302
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||| |||||||| || || || || || ||
Sbjct 2719303 GACACCATTGATAACGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAG 2719362
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| ||||| || || || || ||| |||| || | || || |||
Sbjct 2719363 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGATGGAAGAACTTTGGCTGACTACAAC 2719422
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || ||||| |||||||| ||||| |||| |||||
Sbjct 2719423 ATTCAGAAGGAGTCCACACTTCACTTGGTCTTGCGTCTGCGTGGAGG 2719469
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || || || || ||||| ||| | ||
Sbjct 2719699 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCC 2719758
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || ||||| || ||
Sbjct 2719759 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 2719818
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||| |||||| | | || | || || |||
Sbjct 2719819 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAAC 2719878
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || |||||||| ||||
Sbjct 2719879 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTGCG 2719913
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || || || || ||||| || | ||
Sbjct 2588504 ATGCAGATCTTCGTAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCC 2588445
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || ||||| || ||
Sbjct 2588444 GACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 2588385
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||| |||||| | | || | || || |||
Sbjct 2588384 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAAC 2588325
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||||||||
Sbjct 2588324 ATCCAGAAGGAGTCTACTCTTCACTTGGT 2588296
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || ||||||| ||||| || || || ||||| || || || || |
Sbjct 2718787 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 2718846
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || || ||||| || ||
Sbjct 2718847 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2718906
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||| ||||| || ||| |||||||| |||| | | || || ||
Sbjct 2718907 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAAT 2718966
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || || || || ||||
Sbjct 2718967 ATCCAGAAGGAGTCCACCCTTCATCTTG 2718994
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || |||| || || || ||||| || || || || |
Sbjct 1279436 ATGCAGATTTTCGTCAAGACCTTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 1279377
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || ||||| || ||
Sbjct 1279376 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 1279317
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| || || || ||| |||||||| |||| | | || || |||
Sbjct 1279316 CAGAGGTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAAC 1279257
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || ||||| || ||||
Sbjct 1279256 ATCCAGAAGGAGTCCACACTTCATCTTG 1279229
>seq1
Length=30427671
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| || || || || || | || |||||| | |
Sbjct 8314940 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAATCATCA 8314999
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| |||||||||||||| |||||||| || || |||||
Sbjct 8315000 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 8315059
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| |||||||| ||||| ||||| |||| ||| |||| | | ||||| |||
Sbjct 8315060 CAACGGTTGATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTAGCTGATTACAAC 8315119
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || ||||| || || ||||| | || || | |||||
Sbjct 8315120 ATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGG 8315166
Score = 129 bits (142), Expect = 5e-25
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || |||||| |||| ||||| || ||||| || ||
Sbjct 20549305 ATGCAGATATTCGTCAAGACCCTTACCGGTTAAACCATTACCCTAGAAGTTGAGAGTACA 20549364
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||||||||| |||||||| ||||| ||||||
Sbjct 20549365 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCAA 20549424
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | || || || || |||||||| |||||| ||| | | || ||||||| |
Sbjct 20549425 CAGAGACTAATATTCGCGGGTAAACAGCTTGAGGATGGTCG-CACTCTTG-CAGATTACA 20549482
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||| |||||||| || ||||| ||| | ||| || || | || || ||
Sbjct 20549483 ACATCCAAAAGGAGTCAACACTTCACCTTGTGCTGAGACTCCGTGGTGG 20549531
Score = 109 bits (120), Expect = 5e-19
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || ||||| ||||| ||||| || ||||| || | |
Sbjct 20549760 GATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTC 20549819
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || | | || ||||| || ||||||||||| || || || || ||
Sbjct 20549820 TGATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCA 20549879
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
||| | | |||||||| || || ||||| || ||| ||| || | || |||||||
Sbjct 20549880 ACAGAGACTCATCTTTGCAGGAAAGCAGCTCGAAGATGGTCG-GACTCTTG-CAGATTAC 20549937
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||| |||||||| || ||||| ||| | ||| ||||
Sbjct 20549938 AACATCCAAAAGGAGTCAACACTTCACCTTGTGCTGCG 20549975
>seq5
Length=26975502
Score = 132 bits (146), Expect = 4e-26
Identities = 158/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || ||||| ||||||||||| ||||| || ||||| || |
Sbjct 14953516 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 14953457
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||||||||| |||||| | ||||| ||||||
Sbjct 14953456 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAA 14953397
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | |||||||| || |||||||| || ||| ||| | | || ||||||| |
Sbjct 14953396 CAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCG-CACTCTTG-CAGATTACA 14953339
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
|||| || || ||||| || || ||||||||
Sbjct 14953338 ACATCCAGAAAGAATCAACTCTCCACTTGGT 14953308
Score = 114 bits (126), Expect = 1e-20
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || ||||| || || || ||| | |
Sbjct 772212 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCA 772153
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || || || || |||
Sbjct 772152 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAA 772093
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | ||||| || || |||||||| |||||| ||| | || || ||||||| |
Sbjct 772092 CAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCG-CACACTTG-CAGATTACA 772035
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
|||| || ||||| ||||| || ||||||||
Sbjct 772034 ACATCCAGAAGGAGTCGACTCTTCACTTGGT 772004
Score = 114 bits (126), Expect = 1e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || |||||||| || || || || || || |
Sbjct 772440 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCA 772381
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||||||||| ||||| ||||| ||||| |||||
Sbjct 772380 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAG 772321
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||||||||| || ||||| || ||| | | | | ||||||| |||
Sbjct 772320 CAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAAC 772261
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| |||||||| |||||||| || ||||
Sbjct 772260 ATCCAAAAGGAGTCGACACTTCATCTTG 772233
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || || || || ||||| | || || || | |
Sbjct 772668 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 772609
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||||||| ||||| |||||||| ||||| |||||
Sbjct 772608 GACACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAG 772549
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||||||||| || ||||| || || |||| | | || || |||
Sbjct 772548 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAAC 772489
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||||||||| ||||| || || ||||||
Sbjct 772488 ATTCAAAAGGAGTCGACCCTTCATTTGGTG 772459
Score = 102 bits (112), Expect = 7e-17
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || |||||||| || || || || || || | |
Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||||||||| ||||| ||||| || || || ||
Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6973888
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | ||||||||||| || ||||| |||||| ||| | | || | ||||| |
Sbjct 6973887 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCG-CACTCTTG-CTGATTACA 6973830
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| ||||| || || || || || ||||||
Sbjct 6973829 ACATCCAAAAAGAGTCAACCCTTCATTTGGTG 6973798
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || ||||| ||||| | || || ||| | |
Sbjct 6974235 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCT 6974176
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||| ||||| |||||||| ||||| || ||
Sbjct 6974175 GACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 6974116
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || || || || || ||||| || ||| || | | | || || ||
Sbjct 6974115 CAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAAT 6974056
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| |||||||| || || || |||
Sbjct 6974055 ATCCAAAAGGAGTCTACTCTTCAC 6974032
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | | || || ||| | ||||| || | | ||||| || | |
Sbjct 14953288 ATGCAGATTTTTGTCAGGACACTTACCCGAAAAACCATAGCTTTGGAAGTTGAGAGCTCT 14953229
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| || | || || ||||| |||||||||||||| || || || || |||
Sbjct 14953228 GACACAACCGATAATGTGAAGGCCAAGATACAAGACAAAGAAGGGATCCCACCAGACCAA 14953169
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | |||||||| || ||||| || || ||| ||| || | || | ||||| |
Sbjct 14953168 CAGAGACTTATCTTTGCAGGCAAACAACTCGAAGATGGTCG-GACGCTTG-CTGATTACA 14953111
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||| || ||||| || ||||| || | ||| ||||
Sbjct 14953110 ACATCCAGAAGGAGTCAACACTTCATCTCGTGCTGCG 14953074
>seq3
Length=23459830
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| ||||| || || || || || || || || ||| | |
Sbjct 23037137 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTTGAATCATC 23037196
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||||||||| |||||||| || || || ||
Sbjct 23037197 CGACACCATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGACCA 23037256
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||| || |||||||||||||| || || | | | | | || || ||
Sbjct 23037257 GCAGCGATTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACCCTCGCCGACTACAA 23037316
Query 24883 CATTCAAAAGGAATCGACACTACA 24906
||| || ||||||||||| || ||
Sbjct 23037317 CATCCAGAAGGAATCGACGCTTCA 23037340
>seq2
Length=19698289
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| ||||| || || || || || ||||| || || || |
Sbjct 19344700 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAGTCCTC 19344759
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| |||||||| || || || ||
Sbjct 19344760 TGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCA 19344819
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||| || ||||| || ||||| || || | | | | | ||||| ||
Sbjct 19344820 GCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGTACCTTAGCCGATTACAA 19344879
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || |||||||| || || ||| | || | || | || |||||
Sbjct 19344880 CATCCAGAAGGAATCAACGCTTCACCTTGTCCTTCGTCTCCGTGGAGG 19344927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897560633960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |