Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq2 114 1e-20 seq5 109 5e-19 seq1 105 6e-18 seq3 93.3 4e-14 >seq4 Length=18585056 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| ||| || | | | ||||| |||||||| || Sbjct 2588308 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCA-TCCTCAAGCTGCTTTCC 2588366 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| ||||| |||||||||||||| |||||| ||| Sbjct 2588367 AGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTAGCCTT 2588426 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | ||| || || | |||| ||| || ||||||| ||| Sbjct 2588427 CACGTTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTTCCGGTCAAAGT 2588486 Query 133643 TTTTACGAAAATCTGCAT 133660 |||||||| |||||||| Sbjct 2588487 CTTTACGAAGATCTGCAT 2588504 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| ||| || | | | ||||| |||||||| || Sbjct 2719895 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCA-TCCTCAAGCTGCTTTCC 2719837 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| ||||| || ||||||||||| |||||| ||| Sbjct 2719836 AGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTT 2719777 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| | ||||| || | ||||| ||| || ||||||| ||| Sbjct 2719776 GACGTTGTCAATGGTGTCGGAGCTTTCCACTTCAAGGGTGATGGTCTTTCCGGTCAAAGT 2719717 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 2719716 CTTGACGAAGATCTGCAT 2719699 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| ||| ||| || ||| | ||||| || Sbjct 1278775 AAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCA-TCCTCAAG 1278833 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| | ||||| ||||||||||| |||||||| ||||||||||| ||| Sbjct 1278834 CTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGAT 1278893 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| ||||||| | ||| || || | || | ||| || || Sbjct 1278894 CTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCAAGAGTAATGGTCTTTCC 1278953 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || |||||||||||||| Sbjct 1278954 AGTGAGAGTCTTCACGAAAATCTGCAT 1278980 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| || ||||| ||||||||||| ||| ||| | | | ||||| || Sbjct 2718764 AAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCA-TCCTCTAG 2718706 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| |||| |||| |||||| || ||||| ||||| ||||| || ||| Sbjct 2718705 CTGCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGGAT 2718646 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||||| | ||||| |||| ||||| || || || Sbjct 2718645 CTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTTCC 2718586 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || |||||||| Sbjct 2718585 GGTGAGAGTCTTAACAAAGATCTGCAT 2718559 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 || || | |||||| || ||||| ||||||||||| ||| ||| | | | ||||| || Sbjct 1279459 AAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTACGGCCA-TCCTCTAG 1279517 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| |||| |||| |||||| || ||||| ||||||||||| || ||| Sbjct 1279518 CTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGAT 1279577 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||| | | ||||| |||| ||||| || || || Sbjct 1279578 CTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTTCC 1279637 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || |||||||| Sbjct 1279638 GGTGAGAGTCTTAACAAAGATCTGCAT 1279664 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| || ||||| ||||||||||| ||| |||| | | | ||||| | Sbjct 2588755 AAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCCGCCAACGTGCGGCCA-TCCTCCAA 2588813 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || |||| |||||| || ||||| || |||||||| || ||| Sbjct 2588814 CTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCCTGGAT 2588873 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||| | | ||||| |||| ||||| || || || Sbjct 2588874 CTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTTCC 2588933 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || ||||| |||||||| Sbjct 2588934 GGTGAGAGTCTTAACGAAGATCTGCAT 2588960 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||| ||||| || |||||||| ||| || |||||| || Sbjct 2588527 AAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCCAAAGTTCTGCCGTCCTCAAGT 2588586 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || | || ||||||||| ||||| || || ||||| || |||| Sbjct 2588587 TGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTATCTTGGATC 2588646 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||||| | | |||||| || | || | || || || Sbjct 2588647 TTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGAGTAATCGTCTTTCCC 2588706 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||||||||| Sbjct 2588707 GTTAGGGTTTTAACGAAAATCTGCAT 2588732 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| |||||||| || | | || ||||| | ||| Sbjct 2718990 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTG 2718931 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| | || |||| ||||||||| ||||| || || || ||||| |||||| Sbjct 2718930 CTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTT 2718871 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||| | |||||| || | || | || || || || Sbjct 2718870 GGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTTCCCGT 2718811 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| |||||||||||||| Sbjct 2718810 TAGGGTTTTAACGAAAATCTGCAT 2718787 >seq2 Length=19698289 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || || ||||| || ||||||||| | | || ||| ||| ||||||||||| | Sbjct 19344897 GTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGT--ACGTCCGTCTTCGAGCTGCTTTC 19344840 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| | ||||||||||| || ||||| ||||||||||| |||||| || Sbjct 19344839 CGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCT 19344780 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | || ||| || |||| |||| || || || || || | Sbjct 19344779 TGACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGG 19344720 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 19344719 TTTTCACGAAGATCTGCAT 19344701 >seq5 Length=26975502 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || ||| |||| || | |||||||| |||||||| ||||||||| Sbjct 6974081 TCTTCAAGCTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTTG 6974140 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||||| | |||| ||||| | | || || || | ||| | | Sbjct 6974141 TCCTGGATCTTTGCCTTGACGTTGTCAATAGTGTCAGAGCTTTCAACCTCCAAGGTAATG 6974200 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| |||||||| || || || |||||||| Sbjct 6974201 GTTTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 6974235 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || |||||||| ||| ||| | | | || || |||||||| || Sbjct 6974267 GTTGATTCTTTCTGGATGTTGTAATCAGCCAAGGTGCGGCCA-TCTTCTAGCTGCTTACC 6974325 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | | |||||||| ||||| |||||||||||||| ||||||| ||| Sbjct 6974326 AGCGAAGATCAATCTTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTT 6974385 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | ||| || |||| |||| ||| || || || || || Sbjct 6974386 AACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTACCAGTGAGTGT 6974445 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||| ||||| Sbjct 6974446 TTTCACGAAAATTTGCAT 6974463 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | || ||| | ||||| |||||||| || Sbjct 6973355 GTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCA-TCCTCAAGCTGCTTCCC 6973413 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| | ||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct 6973414 AGCGAAGATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTT 6973473 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | | ||| || || | || | |||||| ||||| || || Sbjct 6973474 GACATTATCAATTGTGTCTGAGCTCTCAACCTCAAGAGTAATGGTTTTTCCGGTAAGGGT 6973533 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 6973534 CTTCACAAATATCTGCAT 6973551 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| || ||||||||| ||| || | | | || || || Sbjct 772691 AAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGGCCA-TCTTCTAG 772749 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| | || | | ||||| || ||||| |||||||||||||| || Sbjct 772750 CTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAAT 772809 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||| | | || | ||||| | | ||| || |||| |||| || ||||| Sbjct 772810 CTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATAGTCTTGCC 772869 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| || ||||| Sbjct 772870 AGTGAGTGTTTTCACGAAGATTTGCAT 772896 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| || || || ||||| || | | || ||| || ||| Sbjct 772463 AAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCAAGAGTTCTTCCGTCTTCAAGC 772522 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || || | |||||| || |||||||| ||||||||||| |||| Sbjct 772523 TGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGGATC 772582 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| |||| | |||| ||||| | | ||| || || | || | ||| ||||| Sbjct 772583 TTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAAAGTAATGGTCTTGCCA 772642 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| || || || || ||||| Sbjct 772643 GTCAGAGTCTTGACAAAGATTTGCAT 772668 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | ||| ||| | ||||| ||||| || || Sbjct 772016 GTCGACTCCTTCTGGATGTTGTAATCTGCAAGTGTGCGACCA-TCCTCAAGCTGTTTTCC 772074 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| | ||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct 772075 AGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTT 772134 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | || || || | || | ||| || ||||| || || Sbjct 772135 GACATTATCGATGGTGTCTGAGCTTTCAACCTCCAGAGTAATGGTCTTTCCGGTAAGGGT 772194 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 772195 CTTCACAAAGATCTGCAT 772212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA---GTCCTCGAGCTGCTTG 133520 || ||||||||||| ||||||||||| | | ||| | | || || ||||||| | Sbjct 14952861 GTTGACTCTTTCTGGATATTGTAATCCGCTAAAGTGTAATAACCATCTTCAAGCTGCTCG 14952920 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || |||| ||| ||||| || |||| | ||| ||||| ||||| | Sbjct 14952921 CCTGCAAAGATTAGCCTCTGTTGGTCCGGTTGGATCCTTTCTTTGTCCTGAATCTTGGCC 14952980 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | |||| ||| || | | |||||| || | |||| ||| || || |||| | Sbjct 14952981 TTCACATTGTCAATCGTATCAGAGCTCTCCACTTCAAGTGTGATGGTCTTTCCCGTCAAA 14953040 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || || |||||||| Sbjct 14953041 GTGTTGACAAATATCTGCAT 14953060 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || |||||||| | | ||| ||| | || || ||||| || || Sbjct 14953320 GTTGATTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGACCA-TCGTCAAGCTGTTTACC 14953378 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | ||| || || ||||||| ||||||||||| |||| || |||| Sbjct 14953379 AGCAAAGATTAGTCTCTGTTGATCCGGAGGGACTCCTTCCTTGTCTTGGATC-TTAGCTT 14953437 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| || || | ||| | |||||| ||||| || | Sbjct 14953438 TAACATTGTCAATAGTGTCTGAACTCTCAACTTCAAGGGTAATGGTTTTACCGGTAAGCG 14953497 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 14953498 TCTTGACAAATATCTGCAT 14953516 >seq1 Length=30427671 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||||||| || || || |||||||| | | ||| ||| ||| || || Sbjct 24277070 AAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGACC-GTCTTCAAG 24277128 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || |||| |||||| || |||||||| |||||||| || ||| Sbjct 24277129 CTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGGAT 24277188 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| || || | || || || | |||| ||||||||| Sbjct 24277189 CTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTTGCC 24277248 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || ||||||||||| Sbjct 24277249 TGTCAAAGTCTTGACAAAAATCTGCAT 24277275 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || |||||||| | | ||| ||| | ||||| ||||| || || Sbjct 20549501 GTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTGCGACCA-TCCTCAAGCTGTTTACC 20549443 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || || | ||| || || |||||||| ||||||||||| |||| || |||| Sbjct 20549442 CGCGAATATTAGTCTCTGTTGATCCGGAGGGATTCCTTCCTTGTCTTGGATC-TTAGCTT 20549384 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| || ||| || || | ||| | ||||| ||||| || | Sbjct 20549383 TAACATTGTCAATAGTGTCTGTACTCTCAACTTCTAGGGTAATGGTTTAACCGGTAAGGG 20549324 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 20549323 TCTTGACGAATATCTGCAT 20549305 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | | ||| ||| | || || |||||||||| Sbjct 20550185 GTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCA-TCTTCATGCTGCTTGCC 20550127 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| | ||| ||||| || | || ||||| ||||| |||||| ||| Sbjct 20550126 TGCAAAGATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGAATCTTTGCCTT 20550067 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||| || | | ||||| || | |||| ||| || || |||| ||| Sbjct 20550066 CACATTGTCAATCGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCGTCAAAGT 20550007 Query 133643 TTTTACGAAAATCTGCAT 133660 ||||||||||||||||| Sbjct 20550006 CTTTACGAAAATCTGCAT 20549989 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || |||||||| | | || ||| | || ||||||||||| || Sbjct 20549957 GTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGACCA-TCTTCGAGCTGCTTTCC 20549899 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| | ||| ||||| || ||||| ||||| ||||| ||||| ||| Sbjct 20549898 TGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTCCTGAATCTTGGCCTT 20549839 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | | ||| || || | ||| | |||||||||||| || || Sbjct 20549838 CAGGTTATCGATTGTATCAGAGCTCTCAACTTCTAGGGTAATGGTTTTGCCGGTAAGGGT 20549779 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 20549778 CTTCACGAAAATCTGCAT 20549761 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| ||| || ||||||||||| || || Sbjct 24276626 GTAGACTCTTTCTGGATGTTGTAATCAGCCAAAGTCCTTCCATCCTCGAGCTGTTTACCA 24276685 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| | ||| ||||| || ||||| | |||||| || ||||| ||| Sbjct 24276686 GCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCATTCCTTATCCTGAATCTTAGCTTTG 24276745 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || || | ||| | ||| ||||| |||| |||| Sbjct 24276746 ACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATGGTCTTGCCTGTCAAAGTT 24276805 Query 133644 TTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 24276806 TTCACAAAGATTTGCAT 24276822 >seq3 Length=23459830 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || || ||||| || ||||| ||| | | || ||| ||| || ||||| || | Sbjct 23037334 GTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGT--ACGGCCGTCTTCAAGCTGTTTCC 23037277 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| | ||||||||||| || ||||| ||||||||||| |||||| || Sbjct 23037276 CGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCCT 23037217 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||||| | || || || | ||| | ||| || || || || | Sbjct 23037216 TCACATTGTCGATGGTGTCGGATGATTCAACCTCAAGGGTTATGGTCTTCCCCGTTAGGG 23037157 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 23037156 TTTTCACGAAGATCTGCAT 23037138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420757700680