Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4 131 2e-25
seq2 120 3e-22
seq5 118 1e-21
seq1 118 1e-21
seq3 111 1e-19
>seq4
Length=18585056
Score = 131 bits (144), Expect = 2e-25
Identities = 170/231 (74%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | ||| |||||||| | |||| |||||| || ||||||||||| |||
Sbjct 2588506 CCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCC 2588565
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| |||| || || ||||| || || || ||||||| ||||||||||| ||||
Sbjct 2588566 AAAGTTCTGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 2588625
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | |||||| || |||||| ||| | |||| | | ||||| |||| ||
Sbjct 2588626 ATACCCTCCTTATCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TC 2588681
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | || ||||| || ||||| | ||||| || || ||||||||
Sbjct 2588682 CACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||| || | ||| |||||| || |||||||| ||||||
Sbjct 2719925 CCACCACGAAGACGCAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 2719866
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || |||||||| || || || || | ||||||||||||| ||||
Sbjct 2719865 AAAGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2719806
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||||| |||||| ||| | |||| | | |||||| ||||||
Sbjct 2719805 ATACCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTTTCCAC 2719747
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || || |||||||| || || || ||||||||
Sbjct 2719746 TTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699
Score = 118 bits (130), Expect = 1e-21
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | ||||||||| || | || |||||| || ||||||||||| |||
Sbjct 2719697 CCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 2719638
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || |||| || || || ||||| ||||||| ||||||||||| |||
Sbjct 2719637 AAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGG 2719578
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||| ||| |||||| ||||| |||| | | ||||| |||| ||
Sbjct 2719577 ATTCCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTC---TC 2719522
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| ||||| || || || || | ||| ||||| || ||||||||
Sbjct 2719521 TACCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471
Score = 114 bits (126), Expect = 1e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | ||||||||| || | ||| |||||| ||||||||||| || |||
Sbjct 1278982 CCTCCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 1279041
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || || || || || || || || ||||| | ||||||||||| ||
Sbjct 1279042 AAAGTTCTACCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 1279101
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||| |||||| |||||| || | | | | | ||||| |||| |||
Sbjct 1279102 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTC---TCC 1279158
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| ||||| || || || ||||| || || ||||| ||||||||
Sbjct 1279159 ACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208
Score = 114 bits (126), Expect = 1e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || | ||| |||||| || |||||||| ||||||
Sbjct 2588278 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 2588337
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || |||||||| || || || || | ||||||||||||| ||||
Sbjct 2588338 AAAGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2588397
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| || ||||||||| |||||| ||||| | | | ||||| |||| ||
Sbjct 2588398 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTC---TCA 2588454
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || | ||||| || || || |||||||| || || || ||||||||
Sbjct 2588455 ACTTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504
Score = 109 bits (120), Expect = 5e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | |||||| || | ||| |||||| || |||||||| ||||||
Sbjct 1278754 CCACCACGGAGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCC 1278813
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || ||||| || || || || || | ||||||||||||| |||
Sbjct 1278814 AAAGTACGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 1278873
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||||||| |||||| ||||| |||| | | ||||| |||| ||
Sbjct 1278874 ATACCTTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTC---TC 1278929
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || | || || || || || || | ||| ||||| || ||||||||
Sbjct 1278930 AACTTCAAGAGTAATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980
Score = 109 bits (120), Expect = 5e-19
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | ||| ||||| || | || |||||| ||||||||||| ||||||
Sbjct 2719241 CCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCC 2719182
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || || || || || || || || ||||| | ||||||||||| ||||
Sbjct 2719181 AAAGTTCTGCCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 2719122
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||| ||||| |||||| |||| | | | ||||| ||| |||
Sbjct 2719121 ATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTC---TCC 2719065
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| ||||| ||||| || ||||| || || || || ||||||||
Sbjct 2719064 ACCTCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015
Score = 104 bits (114), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | || | ||| | || |||||| || |||||||| || ||
Sbjct 1279210 CCACCACGGAGCCTGAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1279269
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| | || |||| |||||| || || || ||||||| ||||||||||| ||||
Sbjct 1279270 AGAGTTCTGCCATCCTCCAACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGA 1279329
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||||||||| |||||| ||| | |||| | | ||||| ||| ||
Sbjct 1279330 ATACCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTC---TC 1279385
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | || ||||| || ||||| || || || || || ||||||||
Sbjct 1279386 CACCTCAAGAGTAATCGTCTTTCCCGTTAAGGTCTTGACGAAAATCTGCAT 1279436
Score = 100 bits (110), Expect = 3e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | ||| ||||| || | || |||||| ||||||||||| || |||
Sbjct 2719469 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTCAGCC 2719410
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || || || ||||| || || || ||||| | ||||||||||| ||
Sbjct 2719409 AAAGTTCTTCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 2719350
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||| |||||| |||||| |||| | | | ||||| ||| |||
Sbjct 2719349 ATACCCTCTTTGTCCTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTC---TCC 2719293
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| ||||| || || || || | ||| ||||| || ||||||||
Sbjct 2719292 ACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | || | ||| | || |||||| || || ||||| || ||
Sbjct 2719013 CCACCACGGAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCA 2718954
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| | || |||| |||||| || || || |||| || ||||||||||| ||||
Sbjct 2718953 AGAGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGA 2718894
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | ||| ||||| |||||| ||| | |||| | | ||||| ||| ||
Sbjct 2718893 ATACCCTCTTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTC---TC 2718838
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | || ||||| || ||||| | ||||| || || ||||||||
Sbjct 2718837 CACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787
>seq2
Length=19698289
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||||||||| ||||| || |||| || |||||||| || || ||
Sbjct 19344891 TCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAA 19344832
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||||| || | | |||||||| |||||| ||| | | |
Sbjct 19344831 ATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 19344772
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || || ||||| | |||||||| || ||||| | ||||||||
Sbjct 19344771 TCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACG 19344712
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 19344711 AAGATCTGCAT 19344701
>seq5
Length=26975502
Score = 118 bits (130), Expect = 1e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | |||||| | ||||| || | || || || || ||||||||||| |||
Sbjct 6974237 CCACCTCTTAACCTGAGAACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAATCAGCC 6974296
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || || ||||||||||| || || ||||| | |||||||| | ||||
Sbjct 6974297 AAGGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGAGGA 6974356
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| || ||||||||| ||||||| ||| | | | | | ||||| |||| ||
Sbjct 6974357 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTC---TCA 6974413
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | ||||| || ||||| || | |||||||| || || |||||
Sbjct 6974414 ACCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6974463
Score = 109 bits (120), Expect = 5e-19
Identities = 155/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || |||||||||||||||||| || || | |||| |||| ||
Sbjct 772459 CACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCAAGAGTTCTTCCGTCTTC 772518
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| ||||| || | | |||||| |||| ||| | | |||||||||
Sbjct 772519 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTG 772578
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702
|||| ||||||| |||| | | ||||| |||| || ||||||| || || |
Sbjct 772579 GATC-TTTGCTTTGACGTTGTCAATAGTGTCAGAGCTC---TCAACCTCCAAAGTAATGG 772634
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || |||| ||| || ||||| || |||||
Sbjct 772635 TCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668
Score = 109 bits (120), Expect = 5e-19
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| | | |||||||| | || || || ||||||||||||||||||
Sbjct 772670 CCACCTCTTAAACGGAGAACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCC 772729
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || || ||||| ||||| || ||||| || | ||||| |||| ||||
Sbjct 772730 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGA 772789
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| || ||||||||| |||||| ||| | | | | | ||||| |||| ||
Sbjct 772790 ATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTC---TCA 772846
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | ||||| || || || || | |||||||| || || |||||
Sbjct 772847 ACCTCGAGAGTGATAGTCTTGCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896
Score = 105 bits (116), Expect = 6e-18
Identities = 152/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || ||| ||||| ||||||||||| || | || || | || ||
Sbjct 6973798 CACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGCAAGAGTGCGACCATCCTC 6973857
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| ||||| || | || ||||||||||| || | | ||| || ||
Sbjct 6973858 TAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTG 6973917
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703
|||||| || | | | | | ||||| |||| || ||||| | ||||| ||
Sbjct 6973918 GATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TCAACCTCAAGGGTGATTGT 6973974
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||||||| ||| |||||||| || |||||
Sbjct 6973975 TTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||| | ||| | ||| ||||||||| ||||||||||| ||
Sbjct 6973553 CCACCACGGAGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCG 6973612
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || ||||| || || |||||||| | | |||||| || | |||
Sbjct 6973613 AGTGTGCGTCCATCTTCAAGCTGTTTTCCAGCAAATATGAGTCTCTGCTGATCTGGTGGA 6973672
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | |||||||| |||||| ||| | | | | | ||||| |||| ||
Sbjct 6973673 ATCCCTTCCTTGTCTTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTC---TCA 6973729
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| ||||| || || || || || || |||||||| ||||||||
Sbjct 6973730 ACCTCCAAAGTGATAGTCTTGCCAGTTAAGGTCTTCACAAAAATCTGCAT 6973779
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| ||||||||||| || | ||| || | || || ||||||||||| |||||
Sbjct 772249 CTCCTTTTGGATGTTGTAATCTGCAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCAAA 772308
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || |||||| |||| ||||| | ||| || || |||||| || | | |
Sbjct 772309 GATAAGCCTCTGCTGATCCGGAGGAATTCCCTCTTTATCTTGGATCTTAGCTTTGACATT 772368
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| ||| || ||||| | ||||| |||||||| || | || ||
Sbjct 772369 GTCAATGGTGTCTGAACTC---TCAACCTCAAGGGTGATTGTTTTACCAGTGAGGGTCTT 772425
Query 35722 CACAAATATCTGCAT 35736
||||| || |||||
Sbjct 772426 GACAAAGATTTGCAT 772440
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| || ||||| || || | || | | || || ||||||||||| || ||
Sbjct 6974044 CTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAA 6974103
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | | |||||||||| ||| | | ||||||||| ||||||| ||| | ||
Sbjct 6974104 AATAAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGA-CGT 6974162
Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
|| | | ||||| ||| ||| ||||||| || || ||||| || |||| ||| |
Sbjct 6974163 TGTCAATAGTGTCAGAGCT---TTCAACCTCCAAGGTAATGGTTTTGCCAGTCAGAGTCT 6974219
Query 35721 TCACAAATATCTGCAT 35736
| ||||| ||||||||
Sbjct 6974220 TGACAAAGATCTGCAT 6974235
Score = 82.4 bits (90), Expect = 7e-11
Identities = 158/232 (68%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | ||||| || | || |||||| || ||||||||||| |
Sbjct 6973323 TTCCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTG 6973382
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| | || || | || || |||||||| || || || || | | ||| ||||||| |
Sbjct 6973383 CAAGAGTCCGACCATCCTCAAGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTG 6973442
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684
| | | ||||||||| ||||| ||| | | | | | ||||| |||| |
Sbjct 6973443 GGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTC---T 6973499
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| ||||| | || || ||||| || || | || |||||||||||||||||
Sbjct 6973500 CAACCTCAAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAATATCTGCAT 6973551
>seq1
Length=30427671
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || ||||||||| ||||||||||| || | || || |||| ||
Sbjct 24277066 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGACCGTCTTC 24277125
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| ||||| || | || |||||| |||| ||| | | ||||| |||
Sbjct 24277126 AAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 24277185
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||| | | | | | || || ||| ||||||| ||||| |||||
Sbjct 24277186 GATCTTAGCCTTAACATTGTCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTT 24277245
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||||||| || ||||| ||||||||
Sbjct 24277246 GCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|||||||| | ||| ||| || || ||||||||||| || | |||| | || |||
Sbjct 8315148 ACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCTAGTGTTCTTCCATCTTCC 8315089
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
| || || || || || |||||||| ||||| |||| || | | |||||||| |
Sbjct 8315088 AATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGG 8315029
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707
||||| |||| | | | | ||||| ||||| ||||| | || || || ||
Sbjct 8315028 ATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCTACCTCTAAGGTTATTGTCTTC 8314969
Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATT 35737
||||| | |||||||| || |||||||||
Sbjct 8314968 CCCGTTAGGGTTTTCACGAAGATCTGCATT 8314939
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| || || || || | || || ||||||| || |||||
Sbjct 20550180 CTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCATGCTGCTTGCCTGCAAA 20550121
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | | ||| ||||| | | || | || |||||| |||||| ||||| | |
Sbjct 20550120 GATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGAATCTTTGCCTTCACATT 20550061
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||| || ||| |||||| || | |||||| || || ||||||||||| ||
Sbjct 20550060 GTCAATCGTATCAGAGCT---TTCCACTTCAAGCGTGATGGTCTTTCCCGTCAAAGTCTT 20550004
Query 35722 CACAAATATCTGCAT 35736
|| || ||||||||
Sbjct 20550003 TACGAAAATCTGCAT 20549989
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | | |||||| ||||| || | || || || |||||||||||||| ||
Sbjct 11218787 CCACCCCTAAGCCTCAATACCAAGTGAAGAGTCGATTCTTTCTGAATGTTGTAATCCGCT 11218846
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || || ||||||||||| ||||||||||||| ||| || || | ||
Sbjct 11218847 AATGTTCTACCATCTTCAAGCTGCTTACCAGCAAATATCAACCTCTGTTGATCAGGTGGT 11218906
Query 35630 ACGCTCTCCTTGTCC 35644
| | ||| ||||||
Sbjct 11218907 ATTCCCTCTTTGTCC 11218921
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||| || | || | ||| ||| || || ||||||||||| |||
Sbjct 24276596 CCACCACGAAGACGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCC 24276655
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || | | || || ||||| ||||| ||||| || | | ||| ||||| | ||
Sbjct 24276656 AAAGTCCTTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 24276715
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| | ||||| ||| ||||| || | | | | | ||||| |||| ||
Sbjct 24276716 ATCCATTCCTTATCCTGAATCTTAGCTTTGACATTATCAATTGTGTCTGAGCTC---TCA 24276772
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| || || || || || ||||||||||||||||| || |||||
Sbjct 24276773 ACCTCCAAGGTAATGGTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822
>seq3
Length=23459830
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| ||||| | ||| || |||| || ||||| || || || ||
Sbjct 23037328 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCAAGCTGTTTCCCGGCGAAA 23037269
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||||| || | | |||||||| |||||| ||||| | |
Sbjct 23037268 ATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTG 23037209
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||| ||||| ||||| | || || || || ||||| | ||||||||
Sbjct 23037208 TCGATGGTGTCGGATGATTCAACCTCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACG 23037149
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 23037148 AAGATCTGCAT 23037138
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||||||| ||||| || | || ||| || || ||||||||||| |||
Sbjct 3005774 CCACCTCTCAACCTCAGAACCAAGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGCC 3005833
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| | | || || ||||| ||||| ||||| || | || |||||||| |||||
Sbjct 3005834 AAGGTAAGGCCATCCTCGAGCTGTTTACCAGCAAAGATAAGTCGTTGCTGGTCTAAAGGA 3005893
Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652
| || ||||||| | ||||||
Sbjct 3005894 ATGCCTTCCTTGTTCTGGATCTT 3005916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793560555560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |