Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 140 3e-28
seq4 120 3e-22
seq5 113 5e-20
seq1 105 7e-18
>seq3
Length=23459830
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || ||||| |||||||| || |||||||||||| |
Sbjct 23037364 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCG 23037305
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || |||||||| || || |||||||| |||||||| || || ||
Sbjct 23037304 AGGGTACGGCCGTCTTCAAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 23037245
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || || || ||| | |||||||| ||||| ||
Sbjct 23037244 ATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACC 23037185
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || ||||| || || |||| ||||| ||||| || ||||| ||
Sbjct 23037184 TCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 23037135
>seq4
Length=18585056
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CC 134545
||||| | || ||||| || | ||| || ||||| ||||| ||||||||||||||| ||
Sbjct 2719241 CCTCCACGCAGACGCAAGACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCC 2719182
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || | || || || ||||| || || || ||||| | |||||| || || ||
Sbjct 2719181 AAAGTTCTGCCA-TCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGG 2719123
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| ||||| || || ||| || || | ||||| || |||||
Sbjct 2719122 AATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCAC 2719063
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| || ||||| || || || || ||||||||||| |||||
Sbjct 2719062 CTCCAAAGTGATAGTTTTCCCAGTCAACGTCTTAACGAAAATCTGCAT 2719015
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
||||| | || ||||| || | || ||||| || ||||| || |||||||| || |||
Sbjct 2588506 CCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGCC 2588565
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || || || || || || || ||||| | |||||| || || ||
Sbjct 2588566 AAAGTTCTGCC-GTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 2588624
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| || || ||||| ||| | ||||| || |||||
Sbjct 2588625 AATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCCAC 2588684
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||||||| || || || |||| |||||||||||||| |||||
Sbjct 2588685 CTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
||||| | ||| |||||||| | ||| || || || ||||| |||||||||||||| |||
Sbjct 1278982 CCTCCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 1279041
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || || ||||| || || || ||||| | |||||| || || ||
Sbjct 1279042 AAAGTTCT-ACCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGG 1279100
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| || || || || |||||| ||| | ||||| || |||||
Sbjct 1279101 GATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATAGTGTCAGAGCTCTCCAC 1279160
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| || || || || || || || || || || || |||||
Sbjct 1279161 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 1279208
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || | ||| || || || ||||| || |||||||||||| | | || |
Sbjct 2719916 AGACGCAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGT 2719857
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || || | ||||||||| || || || || |||||
Sbjct 2719856 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCC 2719797
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| |||||| || || ||
Sbjct 2719796 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCAAGGGTG 2719737
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| ||||| || ||||| || |||||
Sbjct 2719736 ATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| || || || ||||| || |||||||||||| | | || || || ||
Sbjct 1278771 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTC 1278830
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||||| || || || || | ||||||||| || || || || ||||| || || ||
Sbjct 1278831 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 1278890
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || || || ||| | |||||||| || || || ||||||||||| ||
Sbjct 1278891 GATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCAAGAGTAATGGTCTT 1278950
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | ||| || |||||||| |||||
Sbjct 1278951 TCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980
Score = 102 bits (112), Expect = 8e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCT 134568
||| || ||||||||||| || || ||||| || |||||| || | || || ||||
Sbjct 1279461 GTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAAC-GTACGGCCATCCTCTAGCT 1279519
Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628
|||| || || ||||| | | ||||||||| || || |||||||| || || || || |
Sbjct 1279520 GTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCT 1279579
Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688
| || || ||| | ||||| || |||||| ||||| || || || || ||||
Sbjct 1279580 TGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTTCCGG 1279639
Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713
| | ||| ||||| || || |||||
Sbjct 1279640 TGAGAGTCTTAACAAAGATCTGCAT 1279664
Score = 102 bits (112), Expect = 8e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCT 134568
||| || ||||||||||| || || ||||| || |||||| || | || || ||||
Sbjct 2718762 GTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAAC-GTACGGCCATCCTCTAGCT 2718704
Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628
| ||||| || ||||| | | ||||||||| || || ||||| || || || || || |
Sbjct 2718703 GCTTGCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTGGATCT 2718644
Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688
| || || ||| | |||||||| |||||| ||||| || || || || ||||
Sbjct 2718643 TGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCGG 2718584
Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713
| | ||| ||||| || || |||||
Sbjct 2718583 TGAGAGTCTTAACAAAGATCTGCAT 2718559
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
||||| | || ||||| || | ||| || ||||| ||||| |||||||||||||| |||
Sbjct 2719469 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTCAGCC 2719410
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || || || || || || || ||||| | |||||| || || ||
Sbjct 2719409 AAAGTTCTTCCA-TCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGG 2719351
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| || || || || ||| || || | ||||| || |||||
Sbjct 2719350 GATACCCTCTTTGTCCTGGATCTTGGCTTTCACGTTATCAATGGTGTCAGAACTCTCCAC 2719291
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| || ||||| | ||| || ||||| || |||||
Sbjct 2719290 CTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563
|| || || || ||||| ||||| || ||||||||||| || | | | || | || ||
Sbjct 1279228 ACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCA-TCCTC 1279286
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| ||| || || || || ||||| | |||||| || || || || || || || |||||
Sbjct 1279287 CAACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTG 1279346
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||||| ||| | ||||| || ||||| || |||||||| || ||
Sbjct 1279347 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTT 1279406
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || |||||||| |||||
Sbjct 1279407 TCCCGTTAAGGTCTTGACGAAAATCTGCAT 1279436
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG-TGAGAGTCGTC 134563
|| || || || ||||| ||||| || || |||||||| ||| || || | || ||
Sbjct 2718995 ACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGAGTTCTGCCA-TCCTC 2718937
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| ||| || || || || |||| | |||||| || || || || || ||||| |||||
Sbjct 2718936 CAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTG 2718877
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||||| ||| | ||||| || ||||| || |||||||| || ||
Sbjct 2718876 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTT 2718817
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||| |||||||||||||| |||||
Sbjct 2718816 TCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || || || ||||| || |||||||||||| |
Sbjct 2588278 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 2588337
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || ||||| || || || || || | ||||||||| || || ||
Sbjct 2588338 AAAGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2588397
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || || || || | |||||||| || ||
Sbjct 2588398 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTCTCAACT 2588457
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||| || ||||| ||||| || ||||| || |||||
Sbjct 2588458 TCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAGCT 134568
||| || ||||||||||| || || ||||| | ||||||| ||| | || || | ||
Sbjct 2588757 GTGGAGGGTGGATTCCTTCTGGATATTGTAATCCGCCAAC-GTGCGGCCATCCTCCAACT 2588815
Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628
| || || || || || | | ||||||||| || || || ||||| || || || || |
Sbjct 2588816 GCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCCTGGATCT 2588875
Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688
| || || ||| | ||||| || |||||| ||||| || || || || ||||
Sbjct 2588876 TGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTTCCGG 2588935
Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713
| | ||| |||||||| || |||||
Sbjct 2588936 TGAGAGTCTTAACGAAGATCTGCAT 2588960
>seq5
Length=26975502
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| | || || || || |||||||||||||||||||| ||
Sbjct 772442 CCACCTCTGAGACGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCA 772501
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || ||||| || || ||||| || | | ||||||||| || ||
Sbjct 772502 AGAGTTCTTCCGTCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGG 772561
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || ||| |||||| ||| | ||||| || || ||
Sbjct 772562 ATTCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACC 772621
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||||||| || || || | ||| || || || ||||||||
Sbjct 772622 TCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668
Score = 105 bits (116), Expect = 7e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCT 134568
||| || || ||||| || || |||||||| || ||||| |||| | || || ||||
Sbjct 6974260 GTGGAGTGTTGATTCTTTCTGGATGTTGTAATCAGCCAA-GGTGCGGCCATCTTCTAGCT 6974318
Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628
| || || || || ||||| | ||||| || || || |||||||| || || || || |
Sbjct 6974319 GCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 6974378
Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688
|| || || ||| | ||||| || || || |||||||| ||||| ||||| |
Sbjct 6974379 TTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTACCAG 6974438
Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713
| | ||||| ||||||||||||||
Sbjct 6974439 TGAGTGTTTTCACGAAAATTTGCAT 6974463
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || ||||| || ||||||||||| ||| | | ||| | || || ||||||
Sbjct 772694 TGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGGCCATCTTCTAGCTGT 772753
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || || || || | |||||||| || || |||||||| || || ||||| |||
Sbjct 772754 TTACCGGCGAATATTAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTTT 772813
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || ||| | ||||| || || || |||||||| || || || || ||
Sbjct 772814 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATAGTCTTGCCAGTG 772873
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| ||||| ||||| ||||||||
Sbjct 772874 AGTGTTTTCACGAAGATTTGCAT 772896
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || ||||| || || |||||||| || ||| ||| || ||||| |||||
Sbjct 14953313 GTGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGACCATCGTCAAGCTG 14953372
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || ||||| || | | ||| ||||| || || | ||||| || ||||| || ||
Sbjct 14953373 TTTACCAGCAAAGATTAGTCTCTGTTGATCCGGAGGGACTCCTTCCTTGTCTTGGATCTT 14953432
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||| || ||| | ||||| || || || || || |||||||||||||||||
Sbjct 14953433 AGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACTTCAAGGGTAATGGTTTTACCGGT 14953492
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || || || || |||||
Sbjct 14953493 AAGCGTCTTGACAAATATCTGCAT 14953516
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| |||||| || || || || ||||| || |||||||| || ||| || ||
Sbjct 14953071 AGACGCAGCACGAGATGAAGTGTTGACTCCTTCTGGATGTTGTAATCAGCAAGCGTCCGA 14953130
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| ||||| |||||||||||||| || | | ||| || || || || || ||||||
Sbjct 14953131 CCATCTTCGAGTTGTTTGCCTGCAAAGATAAGTCTCTGTTGGTCTGGTGGGATCCCTTCT 14953190
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || || || || |||||| || || || || | ||
Sbjct 14953191 TTGTCTTGTATCTTGGCCTTCACATTATCGGTTGTGTCAGAGCTCTCAACTTCCAAAGCT 14953250
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| | ||| | || | || ||||| |||||
Sbjct 14953251 ATGGTTTTTCGGGTAAGTGTCCTGACAAAAATCTGCAT 14953288
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || |||||||| || ||| ||| || || || |||||
Sbjct 772009 GTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGTGTGCGACCATCCTCAAGCTG 772068
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || || || || | | ||| || || || || || ||||| || || ||||| ||
Sbjct 772069 TTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTT 772128
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| || | ||||| || ||| || || ||||||||||| || |||||
Sbjct 772129 AGCCTTGACATTATCGATGGTGTCTGAGCTTTCAACCTCCAGAGTAATGGTCTTTCCGGT 772188
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || || || || |||||
Sbjct 772189 AAGGGTCTTCACAAAGATCTGCAT 772212
>seq1
Length=30427671
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| ||||| || || || |||||||| |||||||| || ||| || ||
Sbjct 20549978 AGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGA 20549919
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| || |||||||| || | | ||| || || || || || ||||||
Sbjct 20549918 CCATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCT 20549859
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || | || | ||| || || || || || || |||
Sbjct 20549858 TTGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTCAACTTCTAGGGTA 20549799
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| ||||| | || || |||||||| |||||
Sbjct 20549798 ATGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | ||| || | || ||||| || || || || || || |||||||| ||
Sbjct 20550217 TTCCACCGCGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCG 20550158
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| | ||| || || || |||| ||||||||||| || | | ||| || || || |
Sbjct 20550157 CTAAAGTGCGACCATCTTCATGCTGCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTG 20550098
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
|| |||||||| || ||||| ||| || || ||| | || || || |||||
Sbjct 20550097 AAATCCCTTCTTTGTCCTGAATCTTTGCCTTCACATTGTCAATCGTATCAGAGCTTTCCA 20550038
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || || || ||||| || || || ||||| || |||||||| |||||
Sbjct 20550037 CTTCAAGCGTGATGGTCTTTCCCGTCAAAGTCTTTACGAAAATCTGCAT 20549989
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|| ||||| || ||||| || || || || || || |||||||| || ||||| | |
Sbjct 24276605 AGACGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAAAGTCCTT 24276664
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || ||||||||||| || ||||| || | | ||| || || || || || | |||
Sbjct 24276665 CCA-TCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCATTC 24276723
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || |||||| || | |||||| || || || || | ||
Sbjct 24276724 CTTATCCTGAATCTTAGCTTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGT 24276783
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||| || || || |||||||| || || ||||||||
Sbjct 24276784 AATGGTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398355777640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |