Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=19698289 Score = 93.3 bits (102), Expect = 3e-14 Identities = 130/181 (72%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 111730 TAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGT 111789 || ||||| ||||| || | | |||||| || || | ||| | | | || | || Sbjct 7082298 TATACATGAGCATCCCCAAGAACATGGATAAAATCACCAGGAACAAGATCACACACATGA 7082357 Query 111790 GCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATA 111849 || | |||| | || || ||| |||| |||||||||||| |||||||| ||||||||| Sbjct 7082358 GCCAGCATGCAAGTAAGAAGAGAGTAAGAAGCAATGTTAAACGGCACACCAAGGCCCATA 7082417 Query 111850 TCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAA 111909 ||| | || | ||||| | |||||||| |||| || || ||||||||| || ||| Sbjct 7082418 TCTGCTGAACGCTGATACATTTGACATGAGAGTTCCCCTTCTGCCACATAAAACTG-CAA 7082476 Query 111910 A 111910 | Sbjct 7082477 A 7082477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945566562141