Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 1e-25
seq1 122 8e-23
seq4 118 9e-22
seq2 104 2e-17
>seq5
Length=26975502
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || || |||||| |||| ||||| || || || ||
Sbjct 772896 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTCT 772837
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||| ||||| ||||| |||||||| || || |||||
Sbjct 772836 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 772777
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||||| |||||| ||||| | ||||| | ||| | |||||||||||
Sbjct 772776 CAAAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAAC 772717
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || || ||| | ||||||||| | ||||| | ||||| ||
Sbjct 772716 ATTCAGAAAGAATCAACCCTTCATTTGGTTCTCCGTTTAAGAGGTGGTAT 772667
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || |||||||| |||||| | |||||| | || || || ||
Sbjct 772668 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 772609
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||| || || ||||| ||||| || || || |||||
Sbjct 772608 GACACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAG 772549
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || || | |||||| | || || | || ||||||
Sbjct 772548 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAAC 772489
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||||||| | |||||||| | ||| | | ||||| ||
Sbjct 772488 ATTCAAAAGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTAT 772439
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || ||||| || | ||||||||||| || || ||
Sbjct 6973551 ATGCAGATATTTGTGAAGACCCTTACCGGAAAAACCATTACTCTTGAGGTTGAGAGCTCA 6973492
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||| ||||| ||||| || ||||| || |||
Sbjct 6973491 GACACAATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAA 6973432
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || || || | || || || ||| || | |||||||||
Sbjct 6973431 CAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGGACTCTTGCAGATTACAAC 6973372
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || |||||| | ||| | || |||||
Sbjct 6973371 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 6973325
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || ||||| ||| | |||||||| || || ||| ||
Sbjct 772212 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCA 772153
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| ||||| || ||||| || |||
Sbjct 772152 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAA 772093
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || ||||| | || || || || || | |||||||||
Sbjct 772092 CAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACACTTGCAGATTACAAC 772033
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || |||||| | ||| | || |||||
Sbjct 772032 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 771986
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || | || |||||| |||| ||| | || || || ||
Sbjct 6973779 ATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6973720
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| ||||||||||| ||||| || ||||| |||||
Sbjct 6973719 GACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAG 6973660
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | |||| || || ||||| | ||||| | || | | |||||||||
Sbjct 6973659 CAGAGACTCATATTTGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAAC 6973600
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | ||| | || | ||| | || ||||| ||
Sbjct 6973599 ATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTAT 6973550
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || |||||||| || || | || || ||||| || || ||
Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || ||||| ||||| || || ||||| || ||
Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6973888
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || || | || || || || || | |||||||||
Sbjct 6973887 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 6973828
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| ||| | |||||||| | ||| || | ||||| ||
Sbjct 6973827 ATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTAT 6973778
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || ||||| || | ||||| |||||||| || ||
Sbjct 14953516 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 14953457
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || |||||||| ||||| | || || ||||||
Sbjct 14953456 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAA 14953397
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | || || ||||| | || || || || || | |||||||||
Sbjct 14953396 CAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAAC 14953337
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || || || || | || |||||| | | ||| | ||||| ||
Sbjct 14953336 ATCCAGAAAGAATCAACTCTCCACTTGGTTCTCAGGTTGAGAGGTGGTAT 14953287
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || || | || || ||||| || || ||
Sbjct 772440 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCA 772381
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || ||||| ||||| || || || || |||||
Sbjct 772380 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAG 772321
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || || | ||||| | ||| || | |||||||||
Sbjct 772320 CAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAAC 772261
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||||||||| | ||| | || | ||| | || ||||| ||
Sbjct 772260 ATCCAAAAGGAGTCGACACTTCATCTTGTGCTTCGTCTCCGTGGTGGTAT 772211
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || ||| |||| || ||| | || || ||||||||||| ||
Sbjct 14953060 ATGCAGATATTTGTCAACACTTTGACGGGAAAGACCATCACACTTGAAGTGGAGAGCTCT 14953001
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | || || || ||||| ||||||||| | || | ||| || |||
Sbjct 14953000 GATACGATTGACAATGTGAAGGCCAAGATTCAGGACAAAGAAAGGATCCAACCGGACCAA 14952941
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTT-CGACCGTTT--CCGATTAC 27164
||| | |||| | || ||| | || | ||||| ||| || ||| | ||||||
Sbjct 14952940 CAGAGGCTAATCTTTGCAGGCGAGCAGCTTGAAGATGGTTATTACACTTTAGCGGATTAC 14952881
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || || ||||| || | || | ||| | ||| | || |||||
Sbjct 14952880 AATATCCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCCGCGGTGG 14952831
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| | || || ||| | || | || || | ||||| || ||
Sbjct 14953288 ATGCAGATTTTTGTCAGGACACTTACCCGAAAAACCATAGCTTTGGAAGTTGAGAGCTCT 14953229
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | | || | || || || || |||||||||||||| || ||||| || |||
Sbjct 14953228 GACACAACCGATAATGTGAAGGCCAAGATACAAGACAAAGAAGGGATCCCACCAGACCAA 14953169
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||||||| | ||||| || ||| || | |||||||||
Sbjct 14953168 CAGAGACTTATCTTTGCAGGCAAACAACTCGAAGATGGTCGGACGCTTGCTGATTACAAC 14953109
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | ||| | || ||||| | | ||||| ||
Sbjct 14953108 ATCCAGAAGGAGTCAACACTTCATCTCGTGCTGCGTCTTTGTGGTGGGAT 14953059
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || |||||||| ||||| | ||||| | || || ||| ||
Sbjct 6974235 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCT 6974176
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||| || || ||||| ||||| || || || || ||
Sbjct 6974175 GACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 6974116
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||| || || || | ||||| | ||| || | || |||||
Sbjct 6974115 CAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAAT 6974056
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || | || | ||| | || ||||| ||
Sbjct 6974055 ATCCAAAAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTAT 6974006
>seq1
Length=30427671
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || | || || ||| | ||
Sbjct 8314940 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAATCATCA 8314999
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || |||||||| ||||| || ||||| |||||
Sbjct 8315000 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 8315059
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | |||||| |||||||||||||| | || | | |||||||||
Sbjct 8315060 CAACGGTTGATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTAGCTGATTACAAC 8315119
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || |||||||| | ||||||||| | ||| || | || ||
Sbjct 8315120 ATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGG 8315166
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || || ||||| | | ||||| || ||||| || |
Sbjct 20549305 ATGCAGATATTCGTCAAGACCCTTACCGGTTAAACCATTACCCTAGAAGTTGAGAGTACA 20549364
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || |||||||| ||||| || || || ||||||
Sbjct 20549365 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCAA 20549424
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||||| ||| || ||||| | || || || || || | |||||||||
Sbjct 20549425 CAGAGACTAATATTCGCGGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACAAC 20549484
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| ||||||||||| ||
Sbjct 20549485 ATCCAAAAGGAGTCAAC 20549501
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||| |||| || ||| | || || |||||||||||| ||
Sbjct 20549989 ATGCAGATTTTCGTAAAGACTTTGACGGGAAAGACCATCACGCTTGAAGTGGAAAGCTCT 20550048
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | || || ||| ||||| ||||||||||| || |||| || |||
Sbjct 20550049 GATACGATTGACAATGTGAAGGCAAAGATTCAGGACAAAGAAGGGATTTCACCAGACCAA 20550108
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || ||||| || || | | |||||||||
Sbjct 20550109 CAGAGACTCATCTTTGCAGGCAAGCAGCATGAAGATGGTCGCACTTTAGCGGATTACAAC 20550168
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || ||||| || | || | ||| | ||| | || |||||
Sbjct 20550169 ATCCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCCGCGGTGG 20550215
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || |||||||| | ||||| || ||||| || ||
Sbjct 20549761 ATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCT 20549820
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | | || || ||||| ||||||||||| || ||||| || |||
Sbjct 20549821 GATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCAA 20549880
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | ||||| || ||| || | |||||||||
Sbjct 20549881 CAGAGACTCATCTTTGCAGGAAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTACAAC 20549940
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || | || ||||| | || ||||| ||
Sbjct 20549941 ATCCAAAAGGAGTCAACACTTCACCTTGTGCTGCGTCTTCGTGGTGGGAT 20549990
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| ||||| | || ||| | || || ||| ||
Sbjct 24277275 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 24277216
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || || || || || ||||| || || || |||||
Sbjct 24277215 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 24277156
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || || | |||||| || || | | |||||||||
Sbjct 24277155 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 24277096
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | |||||||| | ||| | | ||||| ||
Sbjct 24277095 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTAT 24277046
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||| |||| |||||| | ||||| | || || || ||
Sbjct 24276822 ATGCAAATCTTTGTGAAAACTTTGACAGGCAAGACCATTACCTTGGAGGTTGAGAGCTCA 24276763
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || ||||| || || ||| | || ||||| || |||
Sbjct 24276762 GACACAATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAATGGATCCCACCAGACCAA 24276703
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || ||||| | || || | ||| | | |||||||||
Sbjct 24276702 CAGAGACTCATCTTTGCTGGTAAACAGCTCGAGGATGGAAGGACTTTGGCTGATTACAAC 24276643
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || | || | || |||||| | || ||||| ||
Sbjct 24276642 ATCCAGAAAGAGTCTACTCTTCACCTTGTATTGCGTCTTCGTGGTGGTAT 24276593
>seq4
Length=18585056
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| |||| ||| | || ||||| ||
Sbjct 1279208 ATGCAGATCTTTGTCAAGACGTTGACTGGAAAGACTATCACTTTGGAGGTGGAGAGCTCT 1279149
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || || || |||||||| || || ||||| || ||
Sbjct 1279148 GACACTATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAG 1279089
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| |||||| | ||||| || || | | || ||||||
Sbjct 1279088 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGTAGAACTTTGGCTGACTACAAC 1279029
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | || ||||| |||||| | || || || ||
Sbjct 1279028 ATTCAGAAGGAGTCTACACTTCACTTGGTGTTGCGTCTCCGTGGAGGTAT 1278979
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | ||||||||||| ||||| ||
Sbjct 2588732 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCT 2588673
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || ||||| || || || || || || || ||
Sbjct 2588672 GACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAG 2588613
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || ||| | || ||| | || | | |||||||||
Sbjct 2588612 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGCAGAACTTTGGCGGATTACAAC 2588553
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | |||||||| |||||| |||| || || ||
Sbjct 2588552 ATCCAGAAGGAGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGGTAT 2588503
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| |||| ||| | || || || ||
Sbjct 2719471 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACTATCACTTTGGAGGTAGAGAGCTCT 2719530
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || || || ||||| || || || || ||
Sbjct 2719531 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCGGACCAG 2719590
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| ||||||||||| || || || | | |||||||||
Sbjct 2719591 CAGAGGTTGATCTTTGCCGGAAAACAATTGGAGGATGGTCGTACTTTGGCGGATTACAAC 2719650
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || ||||| |||||| |||| || || ||
Sbjct 2719651 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTGCGTGGAGGTAT 2719700
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || || |||| ||| | || ||||| ||
Sbjct 2719015 ATGCAGATTTTCGTTAAGACGTTGACTGGGAAAACTATCACTTTGGAGGTGGAGAGTTCT 2719074
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || ||||||||||| || || || || || ||
Sbjct 2719075 GACACCATTGATAACGTGAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2719134
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| |||||| | ||||| | || | |||| ||||||
Sbjct 2719135 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTTTGGCCGACTACAAC 2719194
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | || ||||| |||||| |||| || || ||
Sbjct 2719195 ATTCAGAAGGAGTCCACACTCCACTTGGTCTTGCGTCTGCGTGGAGGTAT 2719244
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| | || ||| | || ||||| ||
Sbjct 2719243 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCACTTTGGAGGTGGAGAGTTCT 2719302
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || || |||||||| || || ||||| || ||
Sbjct 2719303 GACACCATTGATAACGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAG 2719362
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || ||| | ||||| | || | | || ||||||
Sbjct 2719363 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGATGGAAGAACTTTGGCTGACTACAAC 2719422
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | || ||||| |||||| |||| || || ||
Sbjct 2719423 ATTCAGAAGGAGTCCACACTTCACTTGGTCTTGCGTCTGCGTGGAGGTAT 2719472
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || |||||||||||| |||
Sbjct 2719699 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCC 2719758
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| ||||| || || || || ||
Sbjct 2719759 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 2719818
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || | || | |||| ||||||
Sbjct 2719819 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAAC 2719878
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| || | || ||||| ||||| | || |||||
Sbjct 2719879 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTGCGTCTTCGTGGTGG 2719925
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || || ||| | |||||||||||||| || |||
Sbjct 1278980 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCC 1278921
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| ||||| || || || || ||
Sbjct 1278920 GACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 1278861
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| | || || || || | |||| ||||||
Sbjct 1278860 CAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAAC 1278801
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| || |||||||| ||| | || |||||
Sbjct 1278800 ATCCAGAAGGAGTCTACCCTTCACTTGGT 1278772
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||| ||||||| ||| | || ||||||||||| || |||
Sbjct 2588504 ATGCAGATCTTCGTAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCC 2588445
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| |||||||| || || || ||
Sbjct 2588444 GACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 2588385
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || | || | |||| ||||||
Sbjct 2588384 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAAC 2588325
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| || | || ||||| | ||| | || |||||
Sbjct 2588324 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTCCGTCTCCGTGGTGG 2588278
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | ||||||||||| ||||| ||
Sbjct 2718787 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 2718846
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || ||||||||||| || || || || || ||
Sbjct 2718847 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2718906
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| || || ||||| || | || || | || |||||
Sbjct 2718907 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAAT 2718966
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || |||||||| ||| | ||| | |||
Sbjct 2718967 ATCCAGAAGGAGTCCACCCTTCATCTTGTT 2718996
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || | || || ||| | ||||||||||| ||||| ||
Sbjct 1279436 ATGCAGATTTTCGTCAAGACCTTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 1279377
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||| || || || || || || ||
Sbjct 1279376 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 1279317
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||| || || || ||||| || | || || | || ||||||
Sbjct 1279316 CAGAGGTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAAC 1279257
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || |||||||| || | ||| | |||
Sbjct 1279256 ATCCAGAAGGAGTCCACACTTCATCTTGTT 1279227
>seq2
Length=19698289
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || ||||| || || || | ||
Sbjct 19344701 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAGTCCTCT 19344760
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||| ||||| || ||||| || ||
Sbjct 19344761 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 19344820
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | |||||| || || | |||||| | ||| | |||||||||||
Sbjct 19344821 CAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGTACCTTAGCCGATTACAAC 19344880
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || ||||| || ||
Sbjct 19344881 ATCCAGAAGGAATCAAC 19344897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918361944640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |