Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11] 7 sequences; 119,667,750 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq5 131 1e-25 seq1 122 8e-23 seq4 118 9e-22 seq2 104 2e-17 >seq5 Length=26975502 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || |||||| |||| ||||| || || || || Sbjct 772896 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTCT 772837 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| ||||| |||||||| || || ||||| Sbjct 772836 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 772777 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||||| |||||| ||||| | ||||| | ||| | ||||||||||| Sbjct 772776 CAAAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAAC 772717 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || ||| | ||||||||| | ||||| | ||||| || Sbjct 772716 ATTCAGAAAGAATCAACCCTTCATTTGGTTCTCCGTTTAAGAGGTGGTAT 772667 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || |||||||| |||||| | |||||| | || || || || Sbjct 772668 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 772609 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| ||| || || ||||| ||||| || || || ||||| Sbjct 772608 GACACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAG 772549 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | |||||| | || || | || |||||| Sbjct 772548 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAAC 772489 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||||||| | |||||||| | ||| | | ||||| || Sbjct 772488 ATTCAAAAGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTAT 772439 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || ||||| || | ||||||||||| || || || Sbjct 6973551 ATGCAGATATTTGTGAAGACCCTTACCGGAAAAACCATTACTCTTGAGGTTGAGAGCTCA 6973492 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| ||||| || ||||| || ||| Sbjct 6973491 GACACAATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAA 6973432 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || | || || || ||| || | ||||||||| Sbjct 6973431 CAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGGACTCTTGCAGATTACAAC 6973372 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||||| | ||| | || ||||| Sbjct 6973371 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 6973325 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || ||||| ||| | |||||||| || || ||| || Sbjct 772212 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCA 772153 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| ||||| || ||||| || ||| Sbjct 772152 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAA 772093 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || ||||| | || || || || || | ||||||||| Sbjct 772092 CAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACACTTGCAGATTACAAC 772033 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||||| | ||| | || ||||| Sbjct 772032 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 771986 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || | || |||||| |||| ||| | || || || || Sbjct 6973779 ATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6973720 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| ||||||||||| ||||| || ||||| ||||| Sbjct 6973719 GACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAG 6973660 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| || || ||||| | ||||| | || | | ||||||||| Sbjct 6973659 CAGAGACTCATATTTGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAAC 6973600 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | ||| | || | ||| | || ||||| || Sbjct 6973599 ATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTAT 6973550 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || |||||||| || || | || || ||||| || || || Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || ||||| ||||| || || ||||| || || Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6973888 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | || || || || || | ||||||||| Sbjct 6973887 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 6973828 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| ||| | |||||||| | ||| || | ||||| || Sbjct 6973827 ATCCAAAAAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTAT 6973778 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || ||||| || | ||||| |||||||| || || Sbjct 14953516 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 14953457 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || |||||||| ||||| | || || |||||| Sbjct 14953456 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAA 14953397 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||| | || || ||||| | || || || || || | ||||||||| Sbjct 14953396 CAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAAC 14953337 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || |||||| | | ||| | ||||| || Sbjct 14953336 ATCCAGAAAGAATCAACTCTCCACTTGGTTCTCAGGTTGAGAGGTGGTAT 14953287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || || || | || || ||||| || || || Sbjct 772440 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCA 772381 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || ||||| ||||| || || || || ||||| Sbjct 772380 GACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAG 772321 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | ||||| | ||| || | ||||||||| Sbjct 772320 CAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAAC 772261 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||||||||| | ||| | || | ||| | || ||||| || Sbjct 772260 ATCCAAAAGGAGTCGACACTTCATCTTGTGCTTCGTCTCCGTGGTGGTAT 772211 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||| |||| || ||| | || || ||||||||||| || Sbjct 14953060 ATGCAGATATTTGTCAACACTTTGACGGGAAAGACCATCACACTTGAAGTGGAGAGCTCT 14953001 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || || || ||||| ||||||||| | || | ||| || ||| Sbjct 14953000 GATACGATTGACAATGTGAAGGCCAAGATTCAGGACAAAGAAAGGATCCAACCGGACCAA 14952941 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTT-CGACCGTTT--CCGATTAC 27164 ||| | |||| | || ||| | || | ||||| ||| || ||| | |||||| Sbjct 14952940 CAGAGGCTAATCTTTGCAGGCGAGCAGCTTGAAGATGGTTATTACACTTTAGCGGATTAC 14952881 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || || ||||| || | || | ||| | ||| | || ||||| Sbjct 14952880 AATATCCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCCGCGGTGG 14952831 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| | || || ||| | || | || || | ||||| || || Sbjct 14953288 ATGCAGATTTTTGTCAGGACACTTACCCGAAAAACCATAGCTTTGGAAGTTGAGAGCTCT 14953229 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | || | || || || || |||||||||||||| || ||||| || ||| Sbjct 14953228 GACACAACCGATAATGTGAAGGCCAAGATACAAGACAAAGAAGGGATCCCACCAGACCAA 14953169 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||||||| | ||||| || ||| || | ||||||||| Sbjct 14953168 CAGAGACTTATCTTTGCAGGCAAACAACTCGAAGATGGTCGGACGCTTGCTGATTACAAC 14953109 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | || ||||| | | ||||| || Sbjct 14953108 ATCCAGAAGGAGTCAACACTTCATCTCGTGCTGCGTCTTTGTGGTGGGAT 14953059 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || |||||||| ||||| | ||||| | || || ||| || Sbjct 6974235 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCT 6974176 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| || || ||||| ||||| || || || || || Sbjct 6974175 GACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 6974116 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || || || | ||||| | ||| || | || ||||| Sbjct 6974115 CAAAGACTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAAT 6974056 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | || | || | ||| | || ||||| || Sbjct 6974055 ATCCAAAAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTAT 6974006 >seq1 Length=30427671 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || | || || ||| | || Sbjct 8314940 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAATCATCA 8314999 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || || |||||||| ||||| || ||||| ||||| Sbjct 8315000 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 8315059 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | |||||| |||||||||||||| | || | | ||||||||| Sbjct 8315060 CAACGGTTGATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTAGCTGATTACAAC 8315119 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || |||||||| | ||||||||| | ||| || | || || Sbjct 8315120 ATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGG 8315166 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || ||||| | | ||||| || ||||| || | Sbjct 20549305 ATGCAGATATTCGTCAAGACCCTTACCGGTTAAACCATTACCCTAGAAGTTGAGAGTACA 20549364 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || |||||||| ||||| || || || |||||| Sbjct 20549365 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCAA 20549424 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||||| ||| || ||||| | || || || || || | ||||||||| Sbjct 20549425 CAGAGACTAATATTCGCGGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACAAC 20549484 Query 27168 ATTCAAAAGGAGTCGAC 27184 || ||||||||||| || Sbjct 20549485 ATCCAAAAGGAGTCAAC 20549501 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| ||| |||| || ||| | || || |||||||||||| || Sbjct 20549989 ATGCAGATTTTCGTAAAGACTTTGACGGGAAAGACCATCACGCTTGAAGTGGAAAGCTCT 20550048 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || || ||| ||||| ||||||||||| || |||| || ||| Sbjct 20550049 GATACGATTGACAATGTGAAGGCAAAGATTCAGGACAAAGAAGGGATTTCACCAGACCAA 20550108 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||| || || | | ||||||||| Sbjct 20550109 CAGAGACTCATCTTTGCAGGCAAGCAGCATGAAGATGGTCGCACTTTAGCGGATTACAAC 20550168 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||| || | || | ||| | ||| | || ||||| Sbjct 20550169 ATCCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCCGCGGTGG 20550215 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || |||||||| | ||||| || ||||| || || Sbjct 20549761 ATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCT 20549820 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | | || || ||||| ||||||||||| || ||||| || ||| Sbjct 20549821 GATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCAA 20549880 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | ||||| || ||| || | ||||||||| Sbjct 20549881 CAGAGACTCATCTTTGCAGGAAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTACAAC 20549940 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | || | || ||||| | || ||||| || Sbjct 20549941 ATCCAAAAGGAGTCAACACTTCACCTTGTGCTGCGTCTTCGTGGTGGGAT 20549990 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| ||||| | || ||| | || || ||| || Sbjct 24277275 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 24277216 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || || || || ||||| || || || ||||| Sbjct 24277215 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 24277156 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | |||||| || || | | ||||||||| Sbjct 24277155 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 24277096 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | |||||||| | ||| | | ||||| || Sbjct 24277095 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTAT 24277046 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| |||| |||||| | ||||| | || || || || Sbjct 24276822 ATGCAAATCTTTGTGAAAACTTTGACAGGCAAGACCATTACCTTGGAGGTTGAGAGCTCA 24276763 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || ||||| || || ||| | || ||||| || ||| Sbjct 24276762 GACACAATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAATGGATCCCACCAGACCAA 24276703 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| | || || | ||| | | ||||||||| Sbjct 24276702 CAGAGACTCATCTTTGCTGGTAAACAGCTCGAGGATGGAAGGACTTTGGCTGATTACAAC 24276643 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || | || |||||| | || ||||| || Sbjct 24276642 ATCCAGAAAGAGTCTACTCTTCACCTTGTATTGCGTCTTCGTGGTGGTAT 24276593 >seq4 Length=18585056 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| || ||| |||| ||| | || ||||| || Sbjct 1279208 ATGCAGATCTTTGTCAAGACGTTGACTGGAAAGACTATCACTTTGGAGGTGGAGAGCTCT 1279149 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || || || |||||||| || || ||||| || || Sbjct 1279148 GACACTATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAG 1279089 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| |||||| | ||||| || || | | || |||||| Sbjct 1279088 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGTAGAACTTTGGCTGACTACAAC 1279029 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||| |||||| | || || || || Sbjct 1279028 ATTCAGAAGGAGTCTACACTTCACTTGGTGTTGCGTCTCCGTGGAGGTAT 1278979 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||||||||| ||||| || Sbjct 2588732 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCT 2588673 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || ||||| || || || || || || || || Sbjct 2588672 GACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAG 2588613 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || ||| | || ||| | || | | ||||||||| Sbjct 2588612 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGCAGAACTTTGGCGGATTACAAC 2588553 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | |||||||| |||||| |||| || || || Sbjct 2588552 ATCCAGAAGGAGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGGTAT 2588503 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| |||| ||| | || || || || Sbjct 2719471 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACTATCACTTTGGAGGTAGAGAGCTCT 2719530 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || || || ||||| || || || || || Sbjct 2719531 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCGGACCAG 2719590 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||| ||||||||||| || || || | | ||||||||| Sbjct 2719591 CAGAGGTTGATCTTTGCCGGAAAACAATTGGAGGATGGTCGTACTTTGGCGGATTACAAC 2719650 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || ||||| |||||| |||| || || || Sbjct 2719651 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTGCGTGGAGGTAT 2719700 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || || |||| ||| | || ||||| || Sbjct 2719015 ATGCAGATTTTCGTTAAGACGTTGACTGGGAAAACTATCACTTTGGAGGTGGAGAGTTCT 2719074 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || ||||||||||| || || || || || || Sbjct 2719075 GACACCATTGATAACGTGAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2719134 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| |||||| | ||||| | || | |||| |||||| Sbjct 2719135 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTTTGGCCGACTACAAC 2719194 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||| |||||| |||| || || || Sbjct 2719195 ATTCAGAAGGAGTCCACACTCCACTTGGTCTTGCGTCTGCGTGGAGGTAT 2719244 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| | || ||| | || ||||| || Sbjct 2719243 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCACTTTGGAGGTGGAGAGTTCT 2719302 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || || |||||||| || || ||||| || || Sbjct 2719303 GACACCATTGATAACGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAG 2719362 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || ||| | ||||| | || | | || |||||| Sbjct 2719363 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGATGGAAGAACTTTGGCTGACTACAAC 2719422 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||| |||||| |||| || || || Sbjct 2719423 ATTCAGAAGGAGTCCACACTTCACTTGGTCTTGCGTCTGCGTGGAGGTAT 2719472 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| ||| | || || |||||||||||| ||| Sbjct 2719699 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCC 2719758 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| ||||| || || || || || Sbjct 2719759 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 2719818 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || || | || | |||| |||||| Sbjct 2719819 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAAC 2719878 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || | || ||||| ||||| | || ||||| Sbjct 2719879 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTGCGTCTTCGTGGTGG 2719925 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | |||||||||||||| || ||| Sbjct 1278980 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCC 1278921 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| ||||| || || || || || Sbjct 1278920 GACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 1278861 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || ||||| | || || || || | |||| |||||| Sbjct 1278860 CAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAAC 1278801 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || |||||||| ||| | || ||||| Sbjct 1278800 ATCCAGAAGGAGTCTACCCTTCACTTGGT 1278772 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| ||| ||||||| ||| | || ||||||||||| || ||| Sbjct 2588504 ATGCAGATCTTCGTAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCC 2588445 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| |||||||| || || || || Sbjct 2588444 GACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 2588385 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || || | || | |||| |||||| Sbjct 2588384 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAAC 2588325 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || | || ||||| | ||| | || ||||| Sbjct 2588324 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTCCGTCTCCGTGGTGG 2588278 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||||||||| ||||| || Sbjct 2718787 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 2718846 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || ||||||||||| || || || || || || Sbjct 2718847 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2718906 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || || ||||| || | || || | || ||||| Sbjct 2718907 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAAT 2718966 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| ||| | ||| | ||| Sbjct 2718967 ATCCAGAAGGAGTCCACCCTTCATCTTGTT 2718996 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || | || || ||| | ||||||||||| ||||| || Sbjct 1279436 ATGCAGATTTTCGTCAAGACCTTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 1279377 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| || || || || || || || Sbjct 1279376 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 1279317 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || || ||||| || | || || | || |||||| Sbjct 1279316 CAGAGGTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGCAGAACTCTTGCTGACTACAAC 1279257 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| || | ||| | ||| Sbjct 1279256 ATCCAGAAGGAGTCCACACTTCATCTTGTT 1279227 >seq2 Length=19698289 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || ||||| || || || | || Sbjct 19344701 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAGTCCTCT 19344760 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| ||||| || ||||| || || Sbjct 19344761 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 19344820 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | |||||| || || | |||||| | ||| | ||||||||||| Sbjct 19344821 CAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGTACCTTAGCCGATTACAAC 19344880 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||| || || Sbjct 19344881 ATCCAGAAGGAATCAAC 19344897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918361944640