Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 4e-25
seq2 125 5e-24
seq1 122 6e-23
seq4 113 3e-20
>seq5
Length=26975502
Score = 129 bits (142), Expect = 4e-25
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 23602 TTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTT 23661
||| || | ||||| || ||||| ||||| ||||| || || || ||||||||||| |||
Sbjct 772905 TTATTTCAGATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTT 772846
Query 23662 GACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACC 23720
|| | | ||||| | || ||| |||| |||| | || ||||| ||||| | ||
Sbjct 772845 GAGAGCTCTGACACCATCGACAATGTTAAGGCAAAGA-TTCAGGACAAGGAAGGCATTCC 772787
Query 23721 GCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGG 23780
|| ||||| || | |||||||| ||||| ||||| || ||||| | || || || |
Sbjct 772786 TCCGGATCAGCAAAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGC 772727
Query 23781 CGATTACAACATACAAAAAGAGTCCACATTACATTTAGTT 23820
|||||||||||| || ||||| || || | ||||| |||
Sbjct 772726 CGATTACAACATTCAGAAAGAATCAACCCTTCATTTGGTT 772687
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || || || ||||| || || || |||||||| |
Sbjct 14953516 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 14953457
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| ||||| | || | | ||||| ||||| || || || |||||
Sbjct 14953456 GACACTATTGACAATGTTAAAGCTAAGA-TCCAAGACAAGGAAGGAGTCCCTCCGGATCA 14953398
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | |||| ||||| || ||||| || || || | |||||| | | ||||||||
Sbjct 14953397 ACAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAA 14953338
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || ||||| || || | || || ||| | |||||| |||| ||
Sbjct 14953337 CATCCAGAAAGAATCAACTCTCCACTTGGTTCTCAGGTTGAGAGGTGG 14953290
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| ||||| ||||| || || || ||||||||||| ||||| | |
Sbjct 6974463 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCT 6974404
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| |||| |||| | | ||||| ||||| | || || || ||
Sbjct 6974403 GACACCATCGACAATGTTAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCTCCTGACCA 6974345
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | || || || || || || || || ||||| | ||||| || | ||||||||
Sbjct 6974344 GCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAA 6974285
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || ||||| || ||| | || || ||| | ||||| |||| ||
Sbjct 6974284 CATCCAGAAAGAATCAACACTCCACTTGGTTCTCAGGTTAAGAGGTGG 6974237
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||| | || || || || |||||| | || ||||| | |
Sbjct 6973779 ATGCAGATTTTTGTGAAGACCTTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6973720
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || |||| | || ||||| ||||| | || ||||||||
Sbjct 6973719 GACACAATCGATAATGTCAAGGCAAAGA-TTCAAGACAAGGAAGGGATTCCACCAGATCA 6973661
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | |||||||| || ||||| || ||||| | |||||| | | ||||||||
Sbjct 6973660 GCAGAGACTCATATTTGCTGGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAA 6973601
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||| ||
Sbjct 6973600 CATCCAAAAGGAGTCTAC 6973583
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || |||||||| || ||||| ||||| || || ||||| |
Sbjct 772440 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCA 772381
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | || | | || ||||| || | || || |||||
Sbjct 772380 GACACCATTGACAATGTCAAAGCTAAGA-TCCAAGATAAAGAGGGAATTCCTCCGGATCA 772322
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| || || || ||||| | |||||| | | ||||||||
Sbjct 772321 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAA 772262
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| ||||| ||||| ||| | |||
Sbjct 772261 CATCCAAAAGGAGTCGACACTTCAT 772237
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || || ||||| ||||| ||||| || || ||||| | |
Sbjct 6974007 ATGCAAATCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCA 6973948
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | || | | || ||||| || | || || || ||
Sbjct 6973947 GACACCATTGACAATGTCAAAGCTAAGA-TCCAAGATAAAGAGGGAATCCCACCGGACCA 6973889
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| || || || || || | |||||| | | ||||||||
Sbjct 6973888 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAA 6973829
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| ||||||||||| || | ||||| ||
Sbjct 6973828 CATCCAAAAAGAGTCAACCCTTCATTTGGT 6973799
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || | || || || ||||||| || || | |||||||| | |
Sbjct 14953288 ATGCAGATTTTTGTCAGGACACTTACCCGAAAAACCATAGCTTTGGAAGTTGAGAGCTCT 14953229
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| || ||| | || | || | | ||||||||||| | || ||||| ||
Sbjct 14953228 GACACAACCGATAATGTGAAGGCCAAGA-TACAAGACAAAGAAGGGATCCCACCAGACCA 14953170
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || ||||| ||||||||||| ||||| | || || | | ||||||||
Sbjct 14953169 ACAGAGACTTATCTTTGCAGGCAAACAACTCGAAGATGGTCGGACGCTTGCTGATTACAA 14953110
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || || ||||| ||| | |||
Sbjct 14953109 CATCCAGAAGGAGTCAACACTTCAT 14953085
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| || ||||| || || ||||| || ||||| | |
Sbjct 772212 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCA 772153
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | || ||||| ||||| | || ||||| ||
Sbjct 772152 GACACCATCGATAATGTCAAGGCTAAGA-TTCAGGACAAGGAAGGGATCCCACCAGACCA 772094
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || || || || ||||| || || || | ||||| | | ||||||||
Sbjct 772093 ACAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACACTTGCAGATTACAA 772034
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || ||||| || | || || |||
Sbjct 772033 CATCCAGAAGGAGTCGACTCTTCACTTGGTT 772003
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| || |||||||| || ||||| || ||||| | |
Sbjct 6973551 ATGCAGATATTTGTGAAGACCCTTACCGGAAAAACCATTACTCTTGAGGTTGAGAGCTCA 6973492
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | || ||||| ||||| | || || || ||
Sbjct 6973491 GACACAATTGATAATGTCAAGGCTAAGA-TTCAGGACAAGGAAGGGATCCCACCGGACCA 6973433
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || || || || || || || || || | || ||| | | ||||||||
Sbjct 6973432 ACAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGGATGGTCGGACTCTTGCAGATTACAA 6973373
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || ||||| || | || || |||
Sbjct 6973372 CATCCAGAAGGAGTCGACTCTTCACTTGGTT 6973342
>seq2
Length=19698289
Score = 125 bits (138), Expect = 5e-24
Identities = 150/201 (75%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| |||||||| ||||| || |||||||||||||| || || |||
Sbjct 19344698 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAGTCC 19344757
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | || | || | | ||||| ||||| | || || ||
Sbjct 19344758 TCTGACACCATCGACAATGTCAAGGCCAAGA-TCCAAGACAAGGAAGGAATCCCACCGGA 19344816
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||||| || || || ||||| || || || ||||||| ||| || |||| ||||||
Sbjct 19344817 CCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGTACCTTAGCCGATTA 19344876
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || || || ||
Sbjct 19344877 CAACATCCAGAAGGAATCAAC 19344897
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
|||||||| || |||| || ||||||||| | | || ||||| || || ||| |||||
Sbjct 14981392 GACAAAGAGGGCATACCACCTGATCAACAGAGGCTGATTTTTGCTGGTAAGCAATTGGAA 14981451
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | || || |||| ||||||||||| || |||||||| || | ||| | || |
Sbjct 14981452 GATGGCCGGACCTTAGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCCTC 14981511
Query 23824 AGGTTGCGAGGAGGA 23838
||| | |||| |||
Sbjct 14981512 AGGCTCAGAGGTGGA 14981526
>seq1
Length=30427671
Score = 122 bits (134), Expect = 6e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| |||||||| ||||| || || || || | || || || ||
Sbjct 8314937 AAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTAGAATCA 8314996
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | ||| | || | | ||||| ||||| | || || ||
Sbjct 8314997 TCAGACACAATCGACAATGTGAAAGCGAAGA-TCCAAGACAAGGAAGGAATCCCACCGGA 8315055
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| || || || || || ||||| |||||| ||||||| | | | || ||| |||||
Sbjct 8315056 TCAGCAACGGTTGATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTAGCTGATTA 8315115
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| || |||||||| || | ||||| ||| || | || |||||||
Sbjct 8315116 CAACATCCAGAAAGAGTCGACGCTTCATTTGGTTCTACGTCTGAGAGGAGG 8315166
Score = 118 bits (130), Expect = 7e-22
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || |||| || || || |||||||| ||
Sbjct 20549305 ATGCAGATATTCGTCAAGACCCTTACCGGTTAAACCATTACCCTAGAAGTTGAGAGTACA 20549364
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| ||||| | || | | ||||| ||||| | || || |||||
Sbjct 20549365 GACACTATTGACAATGTTAAAGCTAAGA-TCCAAGACAAGGAAGGAATCCCTCCGGATCA 20549423
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | ||||||| || || ||||| || || || | |||||| | | ||||||||
Sbjct 20549424 ACAGAGACTAATATTCGCGGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACAA 20549483
Query 23790 CATACAAAAAGAGTCCACA 23808
||| ||||| ||||| |||
Sbjct 20549484 CATCCAAAAGGAGTCAACA 20549502
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | |||||||| || ||||| || ||||| || | |
Sbjct 20549989 ATGCAGATTTTCGTAAAGACTTTGACGGGAAAGACCATCACGCTTGAAGTGGAAAGCTCT 20550048
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | ||| ||| ||||||||||| | | ||||| ||
Sbjct 20550049 GATACGATTGACAATGTGAAGGC-AAAGATTCAGGACAAAGAAGGGATTTCACCAGACCA 20550107
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || ||||| ||||| || | ||||| | |||||||||| ||||||||
Sbjct 20550108 ACAGAGACTCATCTTTGCAGGCAAGCAGCATGAAGATGGTCGCACTTTAGCGGATTACAA 20550167
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||| ||
Sbjct 20550168 CATCCAGAAAGAGTCAAC 20550185
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || || ||||| || || || |||||||| | |
Sbjct 20549761 ATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCT 20549820
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || ||| ||||||||||| | || ||||| |||
Sbjct 20549821 GATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCAA 20549880
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| || || || || ||||| | || ||| | | |||||||||
Sbjct 20549881 CAGAGACTCATCTTTGCAGGAAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTACAAC 20549940
Query 23791 ATACAAAAAGAGTCCACA 23808
|| ||||| ||||| |||
Sbjct 20549941 ATCCAAAAGGAGTCAACA 20549958
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || | || || ||||| |||||| | || ||||| |
Sbjct 24277275 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 24277216
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| |||| | || | | || || ||||| | || || |||||
Sbjct 24277215 GATACTATTGACAATGTTAAGGCTAAGA-TCCAGGATAAGGAAGGAATCCCTCCGGATCA 24277157
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| || || || ||||||| ||||| | | ||||||||
Sbjct 24277156 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAA 24277097
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| ||||| |||||||| | ||||| ||
Sbjct 24277096 CATCCAAAAGGAGTCCACCCTCCATTTGGT 24277067
>seq4
Length=18585056
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||||||||||||||| |||||||| ||||| ||||| || || || | |
Sbjct 2588732 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCT 2588673
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || || || || ||| | || || || ||
Sbjct 2588672 GACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAG 2588613
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || || ||||| || ||||| || |||| | ||||| | |||||||||
Sbjct 2588612 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGCAGAACTTTGGCGGATTACAAC 2588553
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || ||||| || | ||||| || || | |||| |||||
Sbjct 2588552 ATCCAGAAGGAGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGG 2588506
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| ||||| || || ||||| |||||||| | |
Sbjct 1278980 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCC 1278921
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || ||||| |||||| | || || || ||
Sbjct 1278920 GACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 1278861
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || || ||||| || || || | || ||||| | ||| ||||||
Sbjct 1278860 CAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAAC 1278801
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || ||||| || | || || || ||||| | || || ||
Sbjct 1278800 ATCCAGAAGGAGTCTACCCTTCACTTGGTGCTAAGGCTCCGTGGTGG 1278754
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||||||||| || | || || ||||| |||||| | || || || |
Sbjct 2719015 ATGCAGATTTTCGTTAAGACGTTGACTGGGAAAACTATCACTTTGGAGGTGGAGAGTTCT 2719074
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| || || |||||||| ||| | || || || ||
Sbjct 2719075 GACACCATTGATAACGTGAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 2719134
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || || ||||| |||||||| ||||| | | ||||| | ||| ||||||
Sbjct 2719135 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTTTGGCCGACTACAAC 2719194
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || ||||||||| | || || || || | |||| |||||
Sbjct 2719195 ATTCAGAAGGAGTCCACACTCCACTTGGTCTTGCGTCTGCGTGGAGG 2719241
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || ||||| ||||| || |||||| | || || || | |
Sbjct 2719471 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACTATCACTTTGGAGGTAGAGAGCTCT 2719530
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || || || ||||| | || || || ||
Sbjct 2719531 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCGGACCAG 2719590
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
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Sbjct 2719591 CAGAGGTTGATCTTTGCCGGAAAACAATTGGAGGATGGTCGTACTTTGGCGGATTACAAC 2719650
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
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Sbjct 2719651 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTGCGTGGAGG 2719697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009571163556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |