Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 2e-29
seq4 141 7e-29
seq2 136 3e-27
seq5 131 1e-25
seq1 123 2e-23
>seq3
Length=23459830
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || |||||||| ||||| ||||||||||| |||||||| || |||| ||
Sbjct 23037346 ACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCA 23037287
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| |||||||| || ||||| |||||||| || | || | |||||||| ||
Sbjct 23037286 AGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGG 23037227
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | |||||||||| ||||| ||||| | || || |||||
Sbjct 23037226 ATCTTCGCCTTCACATTGTCGATGGTGTCGGATGATTCAACCTCAAGGGTTATGGTCTTC 23037167
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| ||||||||||| |||||
Sbjct 23037166 CCCGTTAGGGTTTTCACGAAGATCTGCAT 23037138
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||| |||| ||| || || ||| || |||||||||||
Sbjct 3005767 TTGCATACCACCTCTCAACCTCAGAACCAAGTGGAGAGTTGACTCTTTCTGGATGTTGTA 3005826
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||| | | || | || | || || ||||| || || |||||||| | || ||||| |
Sbjct 3005827 ATCAGCCAAGGTAAGGC-CATCCTCGAGCTGTTTACCAGCAAAGATAAGTCGTTGCTGGT 3005885
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
|| |||| | |||||||| | | ||||| ||| | | |||| ||||| ||
Sbjct 3005886 CTAAAGGAATGCCTTCCTTGTTCTGGATCTTAGCCTTGACATTATGAATGGAGTCGGAGG 3005945
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || | || || |||||| | || || ||||| || ||||||| ||
Sbjct 3005946 TTTCAACATCAAGTGTTATGGTCTTTTCTGTAAGAGTCTTTGCGTAGATTTGAAT 3006000
>seq4
Length=18585056
Score = 141 bits (156), Expect = 7e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | |||||||| |||||| || |||||| ||||||||||||||
Sbjct 2719701 CATACCTCCACGCAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 2719642
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || | || |||| || || |||||||||||||| | |||||| || |
Sbjct 2719641 CGCCAAAGTACGACCATCCTCCAATTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGG 2719582
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||||| ||| ||||| ||||| | | |||||||| | | ||
Sbjct 2719581 AGGGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTC 2719522
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || |||||||| ||||| |||||||||||||| |||||
Sbjct 2719521 TACCTCCAAAGTGATAGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719471
Score = 131 bits (144), Expect = 1e-25
Identities = 171/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | ||| |||| |||||||| |||||| ||||||||||||||
Sbjct 2588502 CATACCTCCACGCAGACGCAAGACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAATC 2588561
Query 44167 GGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| | ||| || |||| || || ||||| ||||| |||||||| | |||||| ||
Sbjct 2588562 CGCCAAAGTTCT-GC-CGTCCTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCC 2588619
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||| ||||| || ||||| ||| | | | |||||||| | |
Sbjct 2588620 GGAGGAATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTC 2588679
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | ||||||||||||||||| ||||| || ||||| || |||||
Sbjct 2588680 TCCACCTCAAGAGTAATCGTCTTTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2588732
Score = 127 bits (140), Expect = 1e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|| || | ||||| |||||| || |||||| ||||||||||| ||||| | ||
Sbjct 1278763 AGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGA 1278822
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || || ||||| || || || ||||| | ||||||||| || | ||| | |||||||
Sbjct 1278823 CCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCC 1278882
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||||| | | |||||||||| | || || || | |||
Sbjct 1278883 TTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCAAGAGTA 1278942
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| ||||| ||||||||||| || |||||
Sbjct 1278943 ATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1278980
Score = 122 bits (134), Expect = 6e-23
Identities = 170/234 (73%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | ||| |||| |||||| ||| |||||| || |||||||| ||
Sbjct 2719473 CATACCTCCACGCAGACGCAAGACCAAGTGAAGTGTGGACTCCTTCTGAATGTTGTAGTC 2719414
Query 44167 GGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| | ||| | | || || || ||||| ||||| |||||||| | |||||| ||
Sbjct 2719413 AGCCAAAGTT--CTTCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCC 2719356
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283
| || | ||| || || ||| ||||| |||| | ||| | |||||||| |
Sbjct 2719355 GGTGGGATACCCTCTTTGTCCTGGATCTTG-GCTTTCACGTTATCAATGGTGTCAGAACT 2719297
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || |||||||| ||||| |||||||||||||| |||||
Sbjct 2719296 CTCCACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 2719243
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| ||||||||||| ||||| | || | || ||
Sbjct 2719907 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCA 2719848
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | ||| | ||||||||| |||
Sbjct 2719847 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGG 2719788
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| | |||||| || | || || ||||||
Sbjct 2719787 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCAAGGGTGATGGTCTTT 2719728
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| |||||||| |||||
Sbjct 2719727 CCGGTCAAAGTCTTGACGAAGATCTGCAT 2719699
Score = 114 bits (126), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|| || ||||| ||| |||||| ||||||||||| || || ||||| | | || |
Sbjct 1279228 ACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTT--CTGCCATCCT 1279285
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
||| |||||| || || |||||||| | |||||| || | ||| | ||| ||||| ||
Sbjct 1279286 CCAACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTT 1279345
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | |||||||| | |||||||| | ||||||||||
Sbjct 1279346 GGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCT 1279405
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| | |||||| ||||| || |||||
Sbjct 1279406 TTCCCGTTAAGGTCTTGACGAAAATCTGCAT 1279436
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| ||||||||||| ||||| | || | || ||
Sbjct 2588296 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGTCCATCCTCA 2588355
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | ||| | |||||||| |||
Sbjct 2588356 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 2588415
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||||| | || || || | || || ||||||
Sbjct 2588416 ATCTTAGCCTTCACGTTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTT 2588475
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| |||||||| |||||
Sbjct 2588476 CCGGTCAAAGTCTTTACGAAGATCTGCAT 2588504
Score = 105 bits (116), Expect = 5e-18
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|| || ||||| ||| |||||| ||||| ||||| || || ||||| || | || |
Sbjct 2718995 ACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGAGTTCT-GC-CATCCT 2718938
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
||| |||||| ||||| ||||||| | |||||| || | ||| | ||| || || ||
Sbjct 2718937 CCAACTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTT 2718878
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | |||||||| | |||||||| | ||||||||||
Sbjct 2718877 GGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCT 2718818
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| ||||| || ||||| || |||||
Sbjct 2718817 TTCCCGTTAGGGTTTTAACGAAAATCTGCAT 2718787
>seq2
Length=19698289
Score = 136 bits (150), Expect = 3e-27
Identities = 158/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||||||||| ||||| ||||||||||||||||| | || |||| ||
Sbjct 19344909 ACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCG 19344850
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || ||||| |||||||| || | || | |||||||| ||
Sbjct 19344849 AGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGG 19344790
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| | ||| || ||||| | || |||||||
Sbjct 19344789 ATCTTGGCCTTGACATTGT--CGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCT 19344732
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| ||||| ||||||||||| |||||
Sbjct 19344731 TCCCCGTTAGGGTTTTCACGAAGATCTGCAT 19344701
>seq5
Length=26975502
Score = 131 bits (144), Expect = 1e-25
Identities = 174/237 (73%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||| || | | ||||| ||||| || ||||||||| ||||||||
Sbjct 772435 TTGCATACCACCTCTGAGACGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATGTTGTA 772494
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| || ||||| | |||| || |||||||| ||||||||||| | | |||||||
Sbjct 772495 GTCAGCAAGAGTT--CTTCCGTCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGA 772552
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280
|| | ||| | |||||||| ||| ||||| ||||| | ||| | || ||||| |
Sbjct 772553 TCCGGAGGGATTCCTTCCTTGTCCTGGATCTT-TGCTTTGACGTTGTCAATAGTGTCAGA 772611
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||| ||||| ||||| || || || ||||| || |||||||||||
Sbjct 772612 GCTCTCAACCTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 772668
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| |||||||||||||| || ||| ||| | || ||
Sbjct 772004 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGTGTGCGACCATCCTCA 772063
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || ||||| | | ||| || |||| || | |||||||| |||
Sbjct 772064 AGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 772123
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | | ||| ||||||| ||||| ||||||
Sbjct 772124 ATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTTTCAACCTCCAGAGTAATGGTCTTT 772183
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||||||| ||||| |||||
Sbjct 772184 CCGGTAAGGGTCTTCACAAAGATCTGCAT 772212
Score = 113 bits (124), Expect = 3e-20
Identities = 167/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | | ||||| ||||| || ||| |||||||||||||||||
Sbjct 6973777 CATACCACCTCTCAGACGAAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATC 6973836
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| ||||||||||| | | |||||| || |
Sbjct 6973837 AGCAAGAGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGG 6973896
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283
|| | || || || || ||||| |||| || ||| | |||||||| | |
Sbjct 6973897 TGGGATTCCCTCTTTATCTTGGATCTT-AGCTTTGACATTGT--CAATGGTGTCTGAGCT 6973953
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || || || ||||| || |||||||| |||||||||||
Sbjct 6973954 CTCAACCTCAAGGGTGATTGTTTTACCCGTCAGAGTCTTCACAAAGATTTGCAT 6974007
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || ||||| || ||||||||||||||||||||| || || ||| | || ||
Sbjct 772231 CACAAGATGAAGTGTCGACTCCTTTTGGATGTTGTAATCTGCAAGGGTGCGTCCATCTTC 772290
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||| | | ||||||||| | ||| | || || || ||
Sbjct 772291 GAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCTTTATCTTG 772350
Query 44248 TATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| |||| || ||| | |||||||| | || ||||| | || || ||
Sbjct 772351 GATCTT-AGCTTTGACATTGT--CAATGGTGTCTGAACTCTCAACCTCAAGGGTGATTGT 772407
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||||||| || |||||||||||
Sbjct 772408 TTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 772440
Score = 107 bits (118), Expect = 1e-18
Identities = 176/250 (70%), Gaps = 3/250 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| | || | |||| ||| || || || || ||||||||||||||
Sbjct 6974233 CATACCACCTCTTAACCTGAGAACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAATC 6974292
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | ||| | || || |||||||| || || |||||||| | ||||| || |
Sbjct 6974293 AGCCAAGGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGG 6974352
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| ||| | || || | |||||||| | | |
Sbjct 6974353 AGGAATGCCTTCCTTGTCCTGGATCTT-TGCCTTAACATTGTCGATGGTGTCAGAGCTCT 6974411
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAA 44345
| ||||| | || || ||||| || ||||| || |||||||| |||||||| || |||
Sbjct 6974412 CAACCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT-CTGCGAA 6974470
Query 44346 TGAAAATAGC 44355
||| | |||
Sbjct 6974471 GGAAGAGAGC 6974480
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || || || ||||||||||||||||||||| |||||| ||| | || ||
Sbjct 6973570 CACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGTCCATCTTC 6973629
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||| || || ||||| || | | ||||||||||| || | |||||||| ||
Sbjct 6973630 AAGCTGTTTTCCAGCAAATATGAGTCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTG 6973689
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||| | | || ||||||| || || |||||
Sbjct 6973690 AATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTT 6973749
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||||||| || || |||||
Sbjct 6973750 GCCAGTTAAGGTCTTCACAAAAATCTGCAT 6973779
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| |||||||||||||| || || || | || ||
Sbjct 6973343 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTCA 6973402
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||||||||| || ||||| | | ||| || || | || | |||||||| |||
Sbjct 6973403 AGCTGCTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGA 6973462
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | | || ||||| | ||||| || |||
Sbjct 6973463 ATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCAAGAGTAATGGTTTTT 6973522
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||||||| || || |||||
Sbjct 6973523 CCGGTAAGGGTCTTCACAAATATCTGCAT 6973551
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| || || || || |||||||||||||| | || | || ||
Sbjct 772688 ACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGGCCATCTTCT 772747
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||| || || || | |||||||| | ||| | |||||||| |||
Sbjct 772748 AGCTGTTTACCGGCGAATATTAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGA 772807
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | || || | |||||||| | | || ||||| | || || |||||
Sbjct 772808 ATCTT-TGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATAGTCTT 772866
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || |||||||||||||||||
Sbjct 772867 GCCAGTGAGTGTTTTCACGAAGATTTGCAT 772896
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||||||||| ||||| || || || | | || ||
Sbjct 6974027 ACAAGGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCATCTTCA 6974086
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || || | | ||||| || | ||| | |||||||| |||
Sbjct 6974087 AGCTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGG 6974146
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | ||| | || ||||| | | ||| ||||||| ||||| || ||
Sbjct 6974147 ATCTT-TGCCTTGACGTTGTCAATAGTGTCAGAGCTTTCAACCTCCAAGGTAATGGTTTT 6974205
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| || ||||| |||||
Sbjct 6974206 GCCAGTCAGAGTCTTGACAAAGATCTGCAT 6974235
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| || | |||| ||| || || || || ||||||||||||||
Sbjct 14953286 CATACCACCTCTCAACCTGAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATC 14953345
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | ||||| ||||| || || |||||||| | | ||| ||||| |
Sbjct 14953346 TGCAAGAGTGCGACCATCGTCAAGCTGTTTACCAGCAAAGATTAGTCTCTGTTGATCCGG 14953405
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| || |||||||| || ||||| |||| || || | || ||||| | |
Sbjct 14953406 AGGGACTCCTTCCTTGTCTTGGATCTT-AGCTTTAACATTGTCAATAGTGTCTGAACTCT 14953464
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | ||||| || || || || || ||||| || || || |||||
Sbjct 14953465 CAACTTCAAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 14953516
>seq1
Length=30427671
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||||||| | | |||| |||||||| ||| || |||||||||||||| ||
Sbjct 8315166 CCTCCTCTCAGACGTAGAACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCAGCT 8315107
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
||| | | || |||| || || ||||| |||||||| || |||||||| | ||
Sbjct 8315106 AGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGG 8315047
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCC 44287
| |||||||| || |||||| |||| || ||| | || ||||| | |||||
Sbjct 8315046 ATTCCTTCCTTGTCTTGGATCTTC-GCTTTCACATTGT--CGATTGTGTCTGATGATTCT 8314990
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| ||||| ||||| ||||||||||| |||||
Sbjct 8314989 ACCTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 8314940
Score = 123 bits (136), Expect = 2e-23
Identities = 168/234 (72%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | |||||| ||||||||||| |||||| ||||| ||||
Sbjct 24276817 TTGCATACCACCACGAAGACGCAACACAAGGTGAAGCGTAGACTCCTTCTGGATATTGTC 24276876
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
| || ||| ||| | || || ||||| ||||| || ||||| | | ||| || ||
Sbjct 24276877 A---GCAAGTGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTC 24276933
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | ||||||||| ||| ||||| ||||| | | |||||||| | |
Sbjct 24276934 TGGTGGGATACCTTCCTTGTCCTGAATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCT 24276993
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| || || |||||||| |||||||||||||| || || |||||
Sbjct 24276994 CTCAACCTCCAAAGTGATTGTCTTTCCAGTGAGGGTCTTCACAAATATCTGCAT 24277047
Score = 122 bits (134), Expect = 6e-23
Identities = 168/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | ||||| || || ||| |||||||||||||||||||||
Sbjct 24277045 CATACCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATC 24277104
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| ||| |||| || |||||||| ||||||||||| | | ||||||||| |
Sbjct 24277105 AGCGAGTGTGCGACCGTCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGG 24277164
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | |||||||| ||| ||||| ||| || ||| | || || || | |
Sbjct 24277165 AGGGATTCCTTCCTTATCCTGGATCTTAGCCTTAACATTGT--CAATAGTATCAGAACTT 24277222
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| || || || || || || | ||||| || || || |||||
Sbjct 24277223 TCAACCTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 24277275
Score = 102 bits (112), Expect = 6e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || ||| |||||||| || |||||||||||||||||||||
Sbjct 20549991 CATCCCACCACGAAGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATC 20549932
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || |||||||| || |||||||| | | ||| || ||||
Sbjct 20549931 TGCAAGAGTCCGACCATCTTCGAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGGTCTGG 20549872
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||||| || ||| ||||| ||||| | | || || || | | ||
Sbjct 20549871 TGGGATCCCTTCTTTGTCCTGAATCTTGGCCTTCAGGTTATCGATTGTATCAGAGCTCTC 20549812
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| || || || || |||||||||||||| || |||||
Sbjct 20549811 AACTTCTAGGGTAATGGTTTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 20549761
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||||| ||| |||||||| || |||||||||||||||||||||
Sbjct 20549535 CATCCCACCACGGAGTCTCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATC 20549476
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || ||||| || || || || || | | ||| ||||| |
Sbjct 20549475 TGCAAGAGTGCGACCATCCTCAAGCTGTTTACCCGCGAATATTAGTCTCTGTTGATCCGG 20549416
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | |||||||| || ||||| |||| || || | || ||||| | |
Sbjct 20549415 AGGGATTCCTTCCTTGTCTTGGATCTT-AGCTTTAACATTGTCAATAGTGTCTGTACTCT 20549357
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | ||||| || | || || |||||||| ||||| || |||||
Sbjct 20549356 CAACTTCTAGGGTAATGGTTTAACCGGTAAGGGTCTTGACGAATATCTGCAT 20549305
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || ||| || |||||||||||||| || | ||| | || ||
Sbjct 20550197 ACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCA 20550138
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||||| || |||||||| | | ||| || |||| | | ||||| || |||
Sbjct 20550137 TGCTGCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGAAATCCCTTCTTTGTCCTGA 20550078
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || || || | | |||||| || | ||| || ||||||
Sbjct 20550077 ATCTTTGCCTTCACATTGTCAATCGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTT 20550018
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | ||||| ||||| || |||||
Sbjct 20550017 CCCGTCAAAGTCTTTACGAAAATCTGCAT 20549989
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | ||| || |||||||| || ||| || |||||||||||
Sbjct 24276589 TTGCATACCACCACGAAGACGCAATACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTA 24276648
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || | | | || || ||||| || || |||||||| | | ||| || ||
Sbjct 24276649 ATCAGCCAAAGTCCTTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTC 24276708
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| || | | |||||| ||| ||||| |||| | || | || ||||| | |
Sbjct 24276709 TGGTGGGATCCATTCCTTATCCTGAATCTTA-GCTTTGACATTATCAATTGTGTCTGAGC 24276767
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| ||||| ||||| || || | || ||||| |||||||||||
Sbjct 24276768 TCTCAACCTCCAAGGTAATGGTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCAT 24276822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990369288319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |