Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 118 8e-22 >seq2 Length=28351830 Score = 118 bits (130), Expect = 8e-22 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 101708 TGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATC 101767 |||||||| || ||| ||||||||| || ||||| || |||| | || ||||| | Sbjct 16614082 TGAGCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGTGAGCGAGT 16614023 Query 101768 ATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCT 101827 |||||||| | |||||| ||| |||||||||||| ||||| || | |||||||| ||| Sbjct 16614022 ATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGACCCATATCCGCT 16613963 Query 101828 GATCTTTGATACAGTTGACAGGAAAGCT 101855 || | ||||||| |||||| || |||| Sbjct 16613962 GAACGCTGATACATTTGACATGAGAGCT 16613935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361128931257521