Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=28351830 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 145683 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCC 145742 ||| ||| ||| || || ||| || || || ||||| | || ||||| || || || Sbjct 16614110 CAGAGGCCTCACATGATTTTTGTACACATGAGCATCCCCAATAACATGGATAAAATCACC 16614051 Query 145743 GGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTT 145802 || | || | | ||| |||| ||| | || || || |||||| || ||||| Sbjct 16614050 AGGAACAAGATCACACACGTGAGCGAGTATGCAAGTAAGAAGAGAGTAGGAAGCAATGTT 16613991 Query 145803 GAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC 145862 || ||||| || || ||||| ||| | || ||||| |||| || || ||||||||||| Sbjct 16613990 AAACGGCACACCAAGACCCATATCCGCTGAACGCTGATACATTTGACATGAGAGCTCCCC 16613931 Query 145863 GCCCGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 | || || |||||||| ||| | | |||||| || || || ||||| Sbjct 16613930 TTCTGCAACATAGAACTGTGCA-AACATGTGGCATGGAGGAAGTGCCAT 16613883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589871962214840