Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq6 138 1e-27 seq3 125 6e-24 seq4 116 3e-21 seq8 107 2e-18 seq7 105 6e-18 seq5 89.7 4e-13 >seq6 Length=37079636 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | || || | |||||||||| || || || || || ||||||||||| Sbjct 33565084 TACCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCG 33565025 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||||||||| || || || |||| || | |||||| || |||| Sbjct 33565024 CAAGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAG 33564965 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| |||||| |||||| | || | |||||| | |||||||| Sbjct 33564964 GGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGA 33564905 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | |||||| || || || || || ||||| |||| ||| Sbjct 33564904 CTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| |||||||| || || |||||||| || || |||||| |||||| Sbjct 19969551 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 19969610 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| |||||| |||| ||||||||||| || || || || || |||||||| Sbjct 19969611 AGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCCTGG 19969670 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| | ||||||||| || | ||| | || || Sbjct 19969671 ATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTT 19969730 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || ||||||||||| Sbjct 19969731 CCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | |||||||| ||| | ||| ||||| || ||||| ||||| || Sbjct 13448143 TACCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAG 13448084 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| || |||||| ||||| ||||| || |||||||||||||||| || || | Sbjct 13448083 CCAAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTG 13448024 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || || || | || | ||||| | |||||| | Sbjct 13448023 GGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCA 13447964 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||||| || || || ||||||||||| Sbjct 13447963 CCTCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || |||||||| |||||||||||||| || || || |||||| Sbjct 13448351 ACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCA 13448292 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||| ||||||||||| || || || || || ||||| || Sbjct 13448291 AGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGG 13448232 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | || || | |||||| || || | || | || ||| Sbjct 13448231 ATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGTGATTGTCTTG 13448172 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || || ||||||||||| Sbjct 13448171 CCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| |||||||| | || ||||| || ||||||||||| ||| Sbjct 19969759 TACCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 19969818 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || |||||| ||||| |||||||| | |||||||||||||| || |||| Sbjct 19969819 CTAAGGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAG 19969878 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || ||||| || || || || | || | ||||| | |||||||| Sbjct 19969879 GGATCCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGA 19969938 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || || || |||| || || || || |||||||| Sbjct 19969939 CCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 || |||||||| ||||||||||| | |||| || || || ||| ||||| |||||||| Sbjct 33565508 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCC 33565450 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || |||| || | |||||| || ||||| || || ||||| ||| ||| || ||| Sbjct 33565449 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 33565390 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | || | || |||| ||| |||||||| | || | ||| || || |||| ||| Sbjct 33565389 CACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTCAAAGT 33565330 Query 118721 TTTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 33565329 CTTGACAAATATCTGCAT 33565312 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || || || || |||||||| ||||| | || || |||||| Sbjct 33565293 CACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCAAGCGTTCGACCATCCTC 33565234 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || ||||||||||| ||||||| | ||| || || ||||| || || ||||||||| Sbjct 33565233 AAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTG 33565174 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | || | |||||| | |||||| || || | ||| | ||||| Sbjct 33565173 AATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTT 33565114 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| |||||||| Sbjct 33565113 ACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | |||||||||||| | || || || || || || |||||||| Sbjct 13447167 TACCACCACGAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCG 13447108 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || ||| ||| || | || || |||||| |||| | | ||||||||| |||| Sbjct 13447107 CCAAGGTACGCCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAG 13447048 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| || ||| || |||||| | |||| || || | || || | Sbjct 13447047 GAATCCCTTCCTTATCCTGAATCTTCGCTTTAACATTGTCGATCGTATCAGAACTTTCCA 13446988 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || ||||| |||||||| ||||| |||||||| Sbjct 13446987 CCTCGAGAGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 13446939 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||| | ||||||||| |||| ||||||||||| || || ||||| ||| Sbjct 19969987 TACCACCACGTAGACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGG 19970046 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | |||||||| || ||||| ||| | || | | ||||| || |||| Sbjct 19970047 CCAGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAG 19970106 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| ||||| ||||| || || | || | |||||| | ||| || | Sbjct 19970107 GAATACCCTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAA 19970166 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || ||||||| || || ||||| |||||||| Sbjct 19970167 CTTCCAAGGTGATGGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | |||||||||||| | ||||||||| ||||| || ||||| || Sbjct 13447915 TACCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAG 13447856 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || |||||| ||||| ||||| || |||| | | |||||| || || | Sbjct 13447855 CCAAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTG 13447796 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| || ||| || || | || | ||||| | |||||| | Sbjct 13447795 GAATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCA 13447736 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || || |||| || || || || || ||||| Sbjct 13447735 CCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || |||||||| || | ||| || ||||| || || ||||| Sbjct 19970247 GTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGTTGCTTTCCG 19970306 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | | ||||||||| ||||| || |||||||||||| || || ||| Sbjct 19970307 GCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTA 19970366 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||| | ||||| ||||||| ||| | || || || |||| || Sbjct 19970367 ACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTCTTACCAGTCAAGGTC 19970426 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 19970427 TTAACGAAGATCTGCAT 19970443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 || |||||||| ||||||||||| | |||| || || || ||| ||||| |||||||| Sbjct 33830075 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCC 33830133 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || |||| || | |||||| || ||||| || || ||||| ||| ||| || ||| Sbjct 33830134 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 33830193 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | || | || |||| ||| |||||||| | || | ||| || || || ||| Sbjct 33830194 CACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTTTAAGT 33830253 Query 118721 TTTTACAAA 118729 || ||||| Sbjct 33830254 CTTGACAAA 33830262 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||| | ||||||||| || | ||| |||||| || ||||||||||| Sbjct 13447623 TACCACCACGTAGACGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAG 13447564 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | || || ||||| || || ||| |||| | | |||||| || |||| Sbjct 13447563 CCAAAGTTCTGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAG 13447504 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| |||||| || ||| || || | || | || || | ||| || | Sbjct 13447503 GAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAA 13447444 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || ||||| |||| || || ||||| |||||||| Sbjct 13447443 CTTCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395 >seq3 Length=27950219 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | || | || |||||||||| || ||||| ||||| ||||||||||| Sbjct 5226820 TACCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAG 5226879 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || |||||||||||||| || || |||| || | || || || |||| Sbjct 5226880 CCAAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAG 5226939 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| || || || || | |||||||||||| | ||| |||| Sbjct 5226940 GGATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGA 5226999 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 |||| | || | || ||||| || |||||||| || || || ||||| || Sbjct 5227000 CCTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCATCGC 5227051 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || || || || |||||||| ||||| | || || |||||| Sbjct 14806184 CACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCAAGCGTTCGACCATCCTC 14806125 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || ||||||||||| ||||||| | ||| | || ||||| || || ||||||||| Sbjct 14806124 AAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGGATTCCTTCCTTGTCTTG 14806065 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || |||||| | || | ||||| | ||||||||| || | ||| | ||||| Sbjct 14806064 AATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCGACTTCTAGGGTAATGGTTTT 14806005 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| |||||||| Sbjct 14806004 ACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 102 bits (112), Expect = 7e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | ||||||||| ||||| || |||||||| | |||||| |||||| Sbjct 5226315 CACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCCGCAAGAGTGCGACCATCCTC 5226374 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||||||| |||||| | || || | ||| || || |||| || || ||||||||| Sbjct 5226375 GAGCTGTTTACCAGCGAATATAAGTCTCTGTTGGTCCGGAGTGATCCCTTCCTTGTCTTG 5226434 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGT 118699 ||| || || || | |||| |||||| | |||||| || || | ||| Sbjct 5226435 AATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACTTCTAAGGT 5226485 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 || |||||||| ||||||||||| | |||| || || || ||| ||||| |||||||| Sbjct 14806384 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCC 14806326 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || |||| || | |||||| || ||||| || || ||||| ||| ||| || ||| Sbjct 14806325 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 14806266 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTC 118693 || | || | || |||| ||| |||||||| Sbjct 14806265 CACATTGTCAATTGTATCCGAGCTTTCGACCTC 14806233 >seq4 Length=23266485 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || |||||||| | | || | ||| | || ||||| ||||| |||||||| || Sbjct 5744969 CCACCGCGTAAACGAAGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCGCA 5744910 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||||||||||||||| || || |||| || | || ||| || ||||| Sbjct 5744909 AGAGTACGGCCATCCTCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGGG 5744850 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||||||| ||| || |||||| | || | |||||| | |||||| || Sbjct 5744849 ATCCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAACT 5744790 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | ||||| ||| || || || ||||| |||||||| Sbjct 5744789 TCTAGGGTAATGGTTTTATTGGTAAGCGTCTTGACAAATATCTGCAT 5744743 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 || |||||||| ||||||||||| | |||| | ||| || |||||| || |||||||| Sbjct 5738659 GTTGACTCTTTCTGAATGTTGTAGTCCGCT-AAAGTCCGACCATCCTCTAGTTGTTTTCC 5738601 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 | |||| || | ||| || || |||| || || ||||||||| ||| || || Sbjct 5738600 GGTAAAGATTAGCCTCTGTTGGTCCAGAGGGATTCCTTCCTTGTCTTGAATCTTCGCCTT 5738541 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 | | || | ||||| | |||||| || || | ||| | ||||| || || || || Sbjct 5738540 GATGTTGTCAATAGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTTACCAGTAAGCGT 5738481 Query 118721 TTTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 5738480 CTTGACAAATATCTGCAT 5738463 >seq8 Length=40886855 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || || ||||| ||| | ||| | ||| || Sbjct 1190075 ACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAGTCGGCAAGAGTCCTTCCATCTTCA 1190134 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || |||||| |||| || | |||||||| ||||| || || |||||||| Sbjct 1190135 AGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATACCTTCCTTGTCCTGG 1190194 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| ||||| | |||| ||||| | |||||||||||||| || | || || Sbjct 1190195 ATCTTTGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACCTCGAGAGTTATGGTCTTT 1190254 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||||||| || || || ||||| Sbjct 1190255 CCAGTAAGAGTTTTCACGAATATTTGCAT 1190283 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | ||||| ||| |||||||| || ||||||||||| Sbjct 1189827 TACCACCACGAAGACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCCG 1189886 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | ||| || ||||| || |||||| |||| || | |||||||| |||| Sbjct 1189887 CAAGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAG 1189946 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| ||||| || || || || | || | || || | ||| || | Sbjct 1189947 GAATTCCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAA 1190006 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||||| ||| || ||||| || ||||| Sbjct 1190007 CCTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || || || || || ||||||||||| | ||| | ||| || Sbjct 1188638 ACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATCTTCA 1188697 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| |||| || | ||||||||| ||||| || || |||||||| | Sbjct 1188698 AGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGA 1188757 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| | |||||| ||||| | ||| | ||||| Sbjct 1188758 ATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAGGGTAATGGTTTTA 1188817 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 1188818 CCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 >seq7 Length=29178675 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || |||||||| | | || | ||| | || ||||| || || ||||||||||| | | Sbjct 2570612 CCACCGCGTAAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATC-CGC 2570554 Query 118572 ATAGTG--CGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||| || ||||||||| ||||| |||||| |||| || | ||| | || |||| Sbjct 2570553 A-AGTGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAG 2570495 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| || || || || | || | ||| || | ||| |||| Sbjct 2570494 GGATCCCTTCCTTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGA 2570435 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || ||||| || ||||| || ||||| || ||||| Sbjct 2570434 CCTCGAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || |||||||| | | || | ||| | || ||||| || || ||||||||||| Sbjct 2570840 CCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCA 2570781 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||||||||| ||||| |||||| ||||||| | ||| | || ||||| Sbjct 2570780 AGAGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGG 2570721 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||| ||| || || || || | || | | |||| | |||||| || Sbjct 2570720 ATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACT 2570661 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | ||||| || || || ||||| ||||| || ||||| Sbjct 2570660 TCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570614 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || || || || ||||| |||||||| | | || || |||||| Sbjct 2571051 CACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCCCAAGGGTTCGACCATCCTC 2570992 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||||||| ||||| ||||||| | ||| | || ||||| || || ||||| ||| Sbjct 2570991 GAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGGGATCCCTTCCTTATCTTG 2570932 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | | |||| | |||||| || || | ||| | ||||| Sbjct 2570931 GATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTTTT 2570872 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| || ||||| Sbjct 2570871 ACCAGTGAGTGTTTTCACAAATATTTGCAT 2570842 >seq5 Length=22804910 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || ||||| || |||||||| || | ||| || || ||||| ||||||||| Sbjct 22133774 GTTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTCTTCGAGTTGTTTTCCA 22133715 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||| ||||| || || || || || ||||||||| || || ||| Sbjct 22133714 GCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCTTTG 22133655 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| ||| || | || | || ||||||| || | || || || || || || Sbjct 22133654 ACATTGTCGATGGTATCTGATGAT-TCAACCTCGAGAGTGATTGTCTTCCCCGTTAGGGT 22133596 Query 118721 TTTTACAAAAATCTGCAT 118738 ||| || || |||||||| Sbjct 22133595 TTTCACGAAGATCTGCAT 22133578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433683566169532