Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12]
27,771 sequences; 308,032,609 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 138 1e-27
seq3 125 6e-24
seq4 116 3e-21
seq8 107 2e-18
seq7 105 6e-18
seq5 89.7 4e-13
>seq6
Length=37079636
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | || || | |||||||||| || || || || || |||||||||||
Sbjct 33565084 TACCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCG 33565025
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || |||||||||||| || || || |||| || | |||||| || ||||
Sbjct 33565024 CAAGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAG 33564965
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| |||||| |||||| | || | |||||| | ||||||||
Sbjct 33564964 GGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGA 33564905
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | |||||| || || || || || ||||| |||| |||
Sbjct 33564904 CTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTACAT 33564856
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| |||||||| || || |||||||| || || |||||| ||||||
Sbjct 19969551 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 19969610
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| |||||| |||| ||||||||||| || || || || || ||||||||
Sbjct 19969611 AGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCCTGG 19969670
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||| | ||||||||| || | ||| | || ||
Sbjct 19969671 ATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTT 19969730
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || |||||||||||
Sbjct 19969731 CCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | |||||||| ||| | ||| ||||| || ||||| ||||| ||
Sbjct 13448143 TACCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAG 13448084
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| || |||||| ||||| ||||| || |||||||||||||||| || || |
Sbjct 13448083 CCAAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTG 13448024
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | ||||| | |||||| |
Sbjct 13448023 GGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCA 13447964
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || ||||||| || || || |||||||||||
Sbjct 13447963 CCTCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || |||||||| |||||||||||||| || || || ||||||
Sbjct 13448351 ACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCA 13448292
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||| ||||||||||| || || || || || ||||| ||
Sbjct 13448291 AGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGG 13448232
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | || || | |||||| || || | || | || |||
Sbjct 13448231 ATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGTGATTGTCTTG 13448172
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||||| || || |||||||||||
Sbjct 13448171 CCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||| |||||||| | || ||||| || ||||||||||| |||
Sbjct 19969759 TACCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 19969818
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || |||||| ||||| |||||||| | |||||||||||||| || ||||
Sbjct 19969819 CTAAGGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAG 19969878
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || ||||| || || || || | || | ||||| | ||||||||
Sbjct 19969879 GGATCCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGA 19969938
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | || || || |||| || || || || ||||||||
Sbjct 19969939 CCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600
|| |||||||| ||||||||||| | |||| || || || ||| ||||| ||||||||
Sbjct 33565508 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCC 33565450
Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660
|| |||| || | |||||| || ||||| || || ||||| ||| ||| || |||
Sbjct 33565449 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 33565390
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | || |||| ||| |||||||| | || | ||| || || |||| |||
Sbjct 33565389 CACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTCAAAGT 33565330
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 33565329 CTTGACAAATATCTGCAT 33565312
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || || || || |||||||| ||||| | || || ||||||
Sbjct 33565293 CACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCAAGCGTTCGACCATCCTC 33565234
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| ||||||||||| ||||||| | ||| || || ||||| || || |||||||||
Sbjct 33565233 AAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTG 33565174
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | |||||| | |||||| || || | ||| | |||||
Sbjct 33565173 AATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTT 33565114
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| ||||||||
Sbjct 33565113 ACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | |||||||||||| | || || || || || || ||||||||
Sbjct 13447167 TACCACCACGAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCG 13447108
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || ||| ||| || | || || |||||| |||| | | ||||||||| ||||
Sbjct 13447107 CCAAGGTACGCCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAG 13447048
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| || ||| || |||||| | |||| || || | || || |
Sbjct 13447047 GAATCCCTTCCTTATCCTGAATCTTCGCTTTAACATTGTCGATCGTATCAGAACTTTCCA 13446988
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || | || || ||||| |||||||| ||||| ||||||||
Sbjct 13446987 CCTCGAGAGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 13446939
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || |||| | ||||||||| |||| ||||||||||| || || ||||| |||
Sbjct 19969987 TACCACCACGTAGACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGG 19970046
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | |||||||| || ||||| ||| | || | | ||||| || ||||
Sbjct 19970047 CCAGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAG 19970106
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| ||||| ||||| || || | || | |||||| | ||| || |
Sbjct 19970107 GAATACCCTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAA 19970166
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | || || ||||||| || || ||||| ||||||||
Sbjct 19970167 CTTCCAAGGTGATGGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | |||||||||||| | ||||||||| ||||| || ||||| ||
Sbjct 13447915 TACCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAG 13447856
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || |||||| ||||| ||||| || |||| | | |||||| || || |
Sbjct 13447855 CCAAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTG 13447796
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| || ||| || || | || | ||||| | |||||| |
Sbjct 13447795 GAATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCA 13447736
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || | || || || |||| || || || || || |||||
Sbjct 13447735 CCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || |||||||| || | ||| || ||||| || || |||||
Sbjct 19970247 GTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGTTGCTTTCCG 19970306
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | ||||||||| ||||| || |||||||||||| || || |||
Sbjct 19970307 GCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTA 19970366
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||| | ||||| ||||||| ||| | || || || |||| ||
Sbjct 19970367 ACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTCTTACCAGTCAAGGTC 19970426
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 19970427 TTAACGAAGATCTGCAT 19970443
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600
|| |||||||| ||||||||||| | |||| || || || ||| ||||| ||||||||
Sbjct 33830075 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCC 33830133
Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660
|| |||| || | |||||| || ||||| || || ||||| ||| ||| || |||
Sbjct 33830134 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 33830193
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | || |||| ||| |||||||| | || | ||| || || || |||
Sbjct 33830194 CACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTTTAAGT 33830253
Query 118721 TTTTACAAA 118729
|| |||||
Sbjct 33830254 CTTGACAAA 33830262
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || |||| | ||||||||| || | ||| |||||| || |||||||||||
Sbjct 13447623 TACCACCACGTAGACGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAG 13447564
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | || || ||||| || || ||| |||| | | |||||| || ||||
Sbjct 13447563 CCAAAGTTCTGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAG 13447504
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| |||||| || ||| || || | || | || || | ||| || |
Sbjct 13447503 GAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAA 13447444
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | || ||||| |||| || || ||||| ||||||||
Sbjct 13447443 CTTCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395
>seq3
Length=27950219
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | || | || |||||||||| || ||||| ||||| |||||||||||
Sbjct 5226820 TACCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAG 5226879
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || |||||||||||||| || || |||| || | || || || ||||
Sbjct 5226880 CCAAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAG 5226939
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || |||||| || || || || | |||||||||||| | ||| ||||
Sbjct 5226940 GGATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGA 5226999
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741
|||| | || | || ||||| || |||||||| || || || ||||| ||
Sbjct 5227000 CCTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCATCGC 5227051
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || || || || |||||||| ||||| | || || ||||||
Sbjct 14806184 CACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCAAGCGTTCGACCATCCTC 14806125
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| ||||||||||| ||||||| | ||| | || ||||| || || |||||||||
Sbjct 14806124 AAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGGATTCCTTCCTTGTCTTG 14806065
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || |||||| | || | ||||| | ||||||||| || | ||| | |||||
Sbjct 14806064 AATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCGACTTCTAGGGTAATGGTTTT 14806005
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||| ||||||||
Sbjct 14806004 ACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975
Score = 102 bits (112), Expect = 7e-17
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | ||||||||| ||||| || |||||||| | |||||| ||||||
Sbjct 5226315 CACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCCGCAAGAGTGCGACCATCCTC 5226374
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||||||| |||||| | || || | ||| || || |||| || || |||||||||
Sbjct 5226375 GAGCTGTTTACCAGCGAATATAAGTCTCTGTTGGTCCGGAGTGATCCCTTCCTTGTCTTG 5226434
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGT 118699
||| || || || | |||| |||||| | |||||| || || | |||
Sbjct 5226435 AATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACTTCTAAGGT 5226485
Score = 89.7 bits (98), Expect = 4e-13
Identities = 113/153 (74%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600
|| |||||||| ||||||||||| | |||| || || || ||| ||||| ||||||||
Sbjct 14806384 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCC 14806326
Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660
|| |||| || | |||||| || ||||| || || ||||| ||| ||| || |||
Sbjct 14806325 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 14806266
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTC 118693
|| | || | || |||| ||| ||||||||
Sbjct 14806265 CACATTGTCAATTGTATCCGAGCTTTCGACCTC 14806233
>seq4
Length=23266485
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| |||||||| | | || | ||| | || ||||| ||||| |||||||| ||
Sbjct 5744969 CCACCGCGTAAACGAAGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCGCA 5744910
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||||||||||||||| || || |||| || | || ||| || |||||
Sbjct 5744909 AGAGTACGGCCATCCTCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGGG 5744850
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || ||||||||| ||| || |||||| | || | |||||| | |||||| ||
Sbjct 5744849 ATCCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAACT 5744790
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| ||| || || || ||||| ||||||||
Sbjct 5744789 TCTAGGGTAATGGTTTTATTGGTAAGCGTCTTGACAAATATCTGCAT 5744743
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAAT-CGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600
|| |||||||| ||||||||||| | |||| | ||| || |||||| || ||||||||
Sbjct 5738659 GTTGACTCTTTCTGAATGTTGTAGTCCGCT-AAAGTCCGACCATCCTCTAGTTGTTTTCC 5738601
Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660
| |||| || | ||| || || |||| || || ||||||||| ||| || ||
Sbjct 5738600 GGTAAAGATTAGCCTCTGTTGGTCCAGAGGGATTCCTTCCTTGTCTTGAATCTTCGCCTT 5738541
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
| | || | ||||| | |||||| || || | ||| | ||||| || || || ||
Sbjct 5738540 GATGTTGTCAATAGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTTACCAGTAAGCGT 5738481
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 5738480 CTTGACAAATATCTGCAT 5738463
>seq8
Length=40886855
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || || ||||| ||| | ||| | ||| ||
Sbjct 1190075 ACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAGTCGGCAAGAGTCCTTCCATCTTCA 1190134
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || |||||| |||| || | |||||||| ||||| || || ||||||||
Sbjct 1190135 AGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATACCTTCCTTGTCCTGG 1190194
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| ||| ||||| | |||| ||||| | |||||||||||||| || | || ||
Sbjct 1190195 ATCTTTGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACCTCGAGAGTTATGGTCTTT 1190254
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||||||| || || || |||||
Sbjct 1190255 CCAGTAAGAGTTTTCACGAATATTTGCAT 1190283
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||| || | ||||| ||| |||||||| || |||||||||||
Sbjct 1189827 TACCACCACGAAGACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCCG 1189886
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| | ||| || ||||| || |||||| |||| || | |||||||| ||||
Sbjct 1189887 CAAGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAG 1189946
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| ||||| || || || || | || | || || | ||| || |
Sbjct 1189947 GAATTCCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAA 1190006
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || ||||||| ||| || ||||| || |||||
Sbjct 1190007 CCTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || || || || || ||||||||||| | ||| | ||| ||
Sbjct 1188638 ACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATCTTCA 1188697
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || || ||| |||| || | ||||||||| ||||| || || |||||||| |
Sbjct 1188698 AGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGA 1188757
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||| | |||||| ||||| | ||| | |||||
Sbjct 1188758 ATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAGGGTAATGGTTTTA 1188817
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 1188818 CCAGTGAGGGTCTTCACGAATATCTGCAT 1188846
>seq7
Length=29178675
Score = 105 bits (116), Expect = 6e-18
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| |||||||| | | || | ||| | || ||||| || || ||||||||||| | |
Sbjct 2570612 CCACCGCGTAAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATC-CGC 2570554
Query 118572 ATAGTG--CGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| || ||||||||| ||||| |||||| |||| || | ||| | || ||||
Sbjct 2570553 A-AGTGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAG 2570495
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| || || || || | || | ||| || | ||| ||||
Sbjct 2570494 GGATCCCTTCCTTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGA 2570435
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | || ||||| || ||||| || ||||| || |||||
Sbjct 2570434 CCTCGAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| |||||||| | | || | ||| | || ||||| || || |||||||||||
Sbjct 2570840 CCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCA 2570781
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||||||||| ||||| |||||| ||||||| | ||| | || |||||
Sbjct 2570780 AGAGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGG 2570721
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || ||||| ||| || || || || | || | | |||| | |||||| ||
Sbjct 2570720 ATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACT 2570661
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || || ||||| ||||| || |||||
Sbjct 2570660 TCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570614
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || || || || ||||| |||||||| | | || || ||||||
Sbjct 2571051 CACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCCCAAGGGTTCGACCATCCTC 2570992
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||||||| ||||| ||||||| | ||| | || ||||| || || ||||| |||
Sbjct 2570991 GAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGGGATCCCTTCCTTATCTTG 2570932
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | | |||| | |||||| || || | ||| | |||||
Sbjct 2570931 GATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTTTT 2570872
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| || |||||
Sbjct 2570871 ACCAGTGAGTGTTTTCACAAATATTTGCAT 2570842
>seq5
Length=22804910
Score = 89.7 bits (98), Expect = 4e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||| || |||||||| || | ||| || || ||||| |||||||||
Sbjct 22133774 GTTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTCTTCGAGTTGTTTTCCA 22133715
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | ||| ||||| || || || || || ||||||||| || || |||
Sbjct 22133714 GCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCTTTG 22133655
Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | |||| ||| || | || | || ||||||| || | || || || || || ||
Sbjct 22133654 ACATTGTCGATGGTATCTGATGAT-TCAACCTCGAGAGTGATTGTCTTCCCCGTTAGGGT 22133596
Query 118721 TTTTACAAAAATCTGCAT 118738
||| || || ||||||||
Sbjct 22133595 TTTCACGAAGATCTGCAT 22133578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433683566169532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |