Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 5e-11 >seq6 Length=37079636 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || ||||||| ||||| ||||||||||| |||| ||| || ||| | ||| | Sbjct 31022181 GATTTTGAATACGATTACTTTGGATTCAAAACGCTTGAGAGATCATACCTCTTAAAAGTC 31022122 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || | | || || | ||| |||||| ||||| | || ||||| ||||| ||| Sbjct 31022121 CAAGGAACAGTTGTTGAGAGGCCTCAACACATGCTGATGAGGGTTGCTGTTGGGATACAC 31022062 Query 248929 AAGGATGACATAGA 248942 |||||||| || || Sbjct 31022061 AAGGATGATATTGA 31022048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073384336801728