Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=25238555 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| |||||| |||| || || || |||||| | || || ||||| Sbjct 18011245 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCA 18011304 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| || | || ||| | || ||||| | || ||||| Sbjct 18011305 GACACAATTGACAATGTGAAAGCGAAGATTCAAGACAAGGAAGGAATTCCACCGGACCAA 18011364 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||||| || | ||| || |||||| | ||||| | || | ||||||||| Sbjct 18011365 CAACGTTTGATCTTTGCAGGAAAACAATTAGAAGACGGAAGAACACTCGCTGATTACAGC 18011424 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || |||||||| | ||||||||||| || ||||||| | ||||| Sbjct 18011425 ATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATTAAGAGGAGG 18011471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418162421220320