Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 1e-13 >seq7 Length=29178675 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 21000 ACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGG 21059 |||||||||| | |||| || || | ||| ||| ||||||||||| || || || Sbjct 24470818 ACGTGAGCGAGAATGCACGTAAGAAGAGAGTATGAGGCAATGTTAAACGGTACGCCAAGA 24470877 Query 21060 CCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAAC 21119 ||||||||||| || | ||| |||| || || || || || || || || |||||| Sbjct 24470878 CCCATGTCGGCTGAACGCTGATACATTTGACATGAAAGTTCTCCATTCGCAACATAAAAC 24470937 Query 21120 TGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 || | || | ||| || ||||| || |||||| | || || || || ||||| || Sbjct 24470938 TGTGAAAACATGTGGCATGGAGGAAGTGCCATCAGTTTAAGATCAGCAGGATTCCAAGCC 24470997 Query 21180 CACATAACGATGCGCCGATC 21199 |||| | || || ||||| Sbjct 24470998 GACATTATAATCCGTCGATC 24471017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427631215336080